Gene annotation
Transcriptome id Sobic.001G391900.1
Synonym Sb01g037130, AtCNFU1, NFU1
Functional annotation nifU, putative, expressed
UniProt C5X1V6
Pfam PF01106
Panther DB PTHR11178
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016226; iron-sulfur cluster assembly GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT4G01940 : NFU domain protein 1
RAP-DB (Rice) LOC_Os03g20010.1 : nifU, putative, expressed
MaizeGDB (Corn) Zm00025a002208
Brachypodium -
Barley HORVU4Hr1G052610.1 , HORVU4Hr1G052610.2
Wheat TraesCS4D02G181300 , TraesCS4A02G124700 , TraesCS4B02G179700 , TraesCS4B02G179700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
2 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
3 Sobic.002G030500 Reticulon family protein(PubMedID : 26465154)@reticulon domain containing protein, putative, expressed -
4 Sobic.002G036000 -(PubMedID : 26976818)@hydroxyacid oxidase 1, putative, expressed K11517: (S)-2-hydroxy-acid oxidase
5 Sobic.006G188000 expressed protein -
6 Sobic.009G059300 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
7 Sobic.001G102800 expressed protein -
8 Sobic.004G227200 ferredoxin-thioredoxin reductase, variable chain, putative, expressed -
9 Sobic.003G387100 membrane-associated 30 kDa protein, chloroplast precursor, putative, expressed K03969: phage shock protein A
10 Sobic.001G029100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.006G101500 expressed protein -
12 Sobic.008G116300 expressed protein -
13 Sobic.003G443500 cyclase/dehydrase family protein, expressed -
14 Sobic.010G245200 expressed protein -
15 Sobic.003G412900 NAD(P)H dehydrogenase 18(PubMedID : 26465154)@Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
16 Sobic.002G033800 expressed protein -
17 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
18 Sobic.001G517700 catalase domain containing protein, expressed K03781: katE, CAT, catB, catalase
19 Sobic.001G035800 heavy metal-associated domain containing protein, expressed -
20 Sobic.001G069000 ribose-5-phosphate isomerase A, putative, expressed K01807: ribose 5-phosphate isomerase A


Gene co-expression network
sample Sobic001G391900 Sobic001G391900 Sobic002G102200 Sobic002G102200 Sobic001G391900--Sobic002G102200 Sobic006G093900 Sobic006G093900 Sobic001G391900--Sobic006G093900 Sobic002G030500 Sobic002G030500 Sobic001G391900--Sobic002G030500 Sobic002G036000 Sobic002G036000 Sobic001G391900--Sobic002G036000 Sobic006G188000 Sobic006G188000 Sobic001G391900--Sobic006G188000 Sobic009G059300 Sobic009G059300 Sobic001G391900--Sobic009G059300 Sobic001G102800 Sobic001G102800 Sobic001G391900--Sobic001G102800 Sobic004G227200 Sobic004G227200 Sobic001G391900--Sobic004G227200 Sobic003G387100 Sobic003G387100 Sobic001G391900--Sobic003G387100 Sobic006G101500 Sobic006G101500 Sobic002G102200--Sobic006G101500 Sobic002G102200--Sobic001G391900 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic010G058200 Sobic010G058200 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic008G006100 Sobic008G006100 Sobic002G102200--Sobic008G006100 Sobic008G063200 Sobic008G063200 Sobic002G102200--Sobic008G063200 Sobic002G102200--Sobic009G059300 Sobic007G004800 Sobic007G004800 Sobic006G093900--Sobic007G004800 Sobic009G140600 Sobic009G140600 Sobic006G093900--Sobic009G140600 Sobic003G412900 Sobic003G412900 Sobic006G093900--Sobic003G412900 Sobic006G093900--Sobic004G227200 Sobic001G519800 Sobic001G519800 Sobic006G093900--Sobic001G519800 Sobic009G043000 Sobic009G043000 Sobic006G093900--Sobic009G043000 Sobic006G093900--Sobic001G102800 Sobic008G102000 Sobic008G102000 Sobic006G093900--Sobic008G102000 Sobic003G002300 Sobic003G002300 Sobic006G093900--Sobic003G002300 Sobic007G207800 Sobic007G207800 Sobic002G030500--Sobic007G207800 Sobic008G066100 Sobic008G066100 Sobic002G030500--Sobic008G066100 Sobic007G223500 Sobic007G223500 Sobic002G030500--Sobic007G223500 Sobic002G316700 Sobic002G316700 Sobic002G030500--Sobic002G316700 Sobic007G071500 Sobic007G071500 Sobic002G030500--Sobic007G071500 Sobic003G359100 Sobic003G359100 Sobic002G030500--Sobic003G359100 Sobic008G134800 Sobic008G134800 Sobic002G030500--Sobic008G134800 Sobic002G030500--Sobic006G093900 Sobic003G435800 Sobic003G435800 Sobic002G030500--Sobic003G435800 Sobic008G053200 Sobic008G053200 Sobic002G036000--Sobic008G053200 Sobic002G036000--Sobic001G102800 Sobic004G308700 Sobic004G308700 Sobic002G036000--Sobic004G308700 Sobic002G036000--Sobic001G519800 Sobic003G431700 Sobic003G431700 Sobic002G036000--Sobic003G431700 Sobic002G036000--Sobic006G101500 Sobic003G443500 Sobic003G443500 Sobic002G036000--Sobic003G443500 Sobic004G272100 Sobic004G272100 Sobic002G036000--Sobic004G272100 Sobic002G036000--Sobic008G066100 Sobic010G245200 Sobic010G245200 Sobic006G188000--Sobic010G245200 Sobic006G188000--Sobic010G058200 Sobic006G114900 Sobic006G114900 Sobic006G188000--Sobic006G114900 Sobic002G370600 Sobic002G370600 Sobic006G188000--Sobic002G370600 Sobic006G188000--Sobic003G431700 Sobic007G053800 Sobic007G053800 Sobic006G188000--Sobic007G053800 Sobic001G517700 Sobic001G517700 Sobic006G188000--Sobic001G517700 Sobic006G207800 Sobic006G207800 Sobic006G188000--Sobic006G207800 Sobic006G102000 Sobic006G102000 Sobic006G188000--Sobic006G102000 Sobic009G059300--Sobic003G387100 Sobic004G012900 Sobic004G012900 Sobic009G059300--Sobic004G012900 Sobic010G005500 Sobic010G005500 Sobic009G059300--Sobic010G005500 Sobic009G059300--Sobic006G207800 Sobic008G171300 Sobic008G171300 Sobic009G059300--Sobic008G171300 Sobic001G309300 Sobic001G309300 Sobic009G059300--Sobic001G309300 Sobic007G052400 Sobic007G052400 Sobic009G059300--Sobic007G052400 Sobic009G030900 Sobic009G030900 Sobic009G059300--Sobic009G030900 Sobic008G073100 Sobic008G073100 Sobic009G059300--Sobic008G073100 Sobic001G102800--Sobic006G207800 Sobic001G102800--Sobic001G519800 Sobic001G102800--Sobic003G002300 Sobic010G201700 Sobic010G201700 Sobic001G102800--Sobic010G201700 Sobic001G102800--Sobic009G043000 Sobic001G102800--Sobic004G272100 Sobic007G009200 Sobic007G009200 Sobic001G102800--Sobic007G009200 Sobic001G102800--Sobic007G052400 Sobic001G102800--Sobic003G431700 Sobic004G227200--Sobic007G223500 Sobic004G227200--Sobic006G093900 Sobic004G227200--Sobic002G316700 Sobic001G035800 Sobic001G035800 Sobic004G227200--Sobic001G035800 Sobic009G143100 Sobic009G143100 Sobic004G227200--Sobic009G143100 Sobic001G168800 Sobic001G168800 Sobic004G227200--Sobic001G168800 Sobic004G175500 Sobic004G175500 Sobic004G227200--Sobic004G175500 Sobic003G387800 Sobic003G387800 Sobic004G227200--Sobic003G387800 Sobic004G227200--Sobic002G030500 Sobic003G387100--Sobic009G059300 Sobic004G336200 Sobic004G336200 Sobic003G387100--Sobic004G336200 Sobic003G387100--Sobic008G073100 Sobic003G387100--Sobic006G207800 Sobic003G160800 Sobic003G160800 Sobic003G387100--Sobic003G160800 Sobic005G110400 Sobic005G110400 Sobic003G387100--Sobic005G110400 Sobic003G387100--Sobic004G012900 Sobic003G387100--Sobic003G412900 Sobic010G035400 Sobic010G035400 Sobic003G387100--Sobic010G035400
Octagon: transcription factors


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