Gene annotation
Transcriptome id Sobic.006G188000.1
Synonym Sb06g026170
Functional annotation expressed protein
UniProt C5YEG5
Pfam PF10184
Panther DB PTHR34123 PTHR34123:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G46100 : Nuclear transport factor 2 (NTF2) family protein
RAP-DB (Rice) LOC_Os07g10495.1 : expressed protein
MaizeGDB (Corn) Zm00025a010115
Brachypodium KQJ84168
Barley HORVU2Hr1G094180.1 , HORVU2Hr1G094180.2 , HORVU2Hr1G094190.3 , HORVU2Hr1G094190.2 , HORVU2Hr1G094190.1
Wheat TraesCS2B02G414700 , TraesCS2B02G414700 , TraesCS2D02G394100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G245200 expressed protein -
2 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
3 Sobic.006G114900 - -
4 Sobic.002G370600 - -
5 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
6 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
7 Sobic.001G517700 catalase domain containing protein, expressed K03781: katE, CAT, catB, catalase
8 Sobic.006G207800 Plastid-lipid associated protein PAP / fibrillin family protein(PubMedID : 26465154)@PAP fibrillin family domain containing protein, expressed -
9 Sobic.006G102000 PAP fibrillin family domain containing protein, expressed -
10 Sobic.004G051100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
11 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
12 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
13 Sobic.001G391900 nifU, putative, expressed -
14 Sobic.006G101500 expressed protein -
15 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
16 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
17 Sobic.001G003200 RNApolymerase sigma-subunit F(PubMedID : 26465154)@RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
18 Sobic.009G056700 6PF-2-K/Fru-2,6-P2ASE liver isozyme, putative, expressed K01103: 6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3
19 Sobic.001G491000 ribulose-phosphate 3-epimerase, chloroplast precursor, putative, expressed K01783: rpe, ribulose-phosphate 3-epimerase
20 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein


Gene co-expression network
sample Sobic006G188000 Sobic006G188000 Sobic010G245200 Sobic010G245200 Sobic006G188000--Sobic010G245200 Sobic010G058200 Sobic010G058200 Sobic006G188000--Sobic010G058200 Sobic006G114900 Sobic006G114900 Sobic006G188000--Sobic006G114900 Sobic002G370600 Sobic002G370600 Sobic006G188000--Sobic002G370600 Sobic003G431700 Sobic003G431700 Sobic006G188000--Sobic003G431700 Sobic007G053800 Sobic007G053800 Sobic006G188000--Sobic007G053800 Sobic001G517700 Sobic001G517700 Sobic006G188000--Sobic001G517700 Sobic006G207800 Sobic006G207800 Sobic006G188000--Sobic006G207800 Sobic006G102000 Sobic006G102000 Sobic006G188000--Sobic006G102000 Sobic010G245200--Sobic007G053800 Sobic010G245200--Sobic002G370600 Sobic001G005200 Sobic001G005200 Sobic010G245200--Sobic001G005200 Sobic010G245200--Sobic003G431700 Sobic009G140600 Sobic009G140600 Sobic010G245200--Sobic009G140600 Sobic001G122300 Sobic001G122300 Sobic010G245200--Sobic001G122300 Sobic010G245200--Sobic006G188000 Sobic003G378600 Sobic003G378600 Sobic010G245200--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic010G245200--Sobic008G102000 Sobic001G286600 Sobic001G286600 Sobic010G058200--Sobic001G286600 Sobic010G058200--Sobic006G188000 Sobic004G154400 Sobic004G154400 Sobic010G058200--Sobic004G154400 Sobic002G102200 Sobic002G102200 Sobic010G058200--Sobic002G102200 Sobic009G062400 Sobic009G062400 Sobic010G058200--Sobic009G062400 Sobic010G269400 Sobic010G269400 Sobic010G058200--Sobic010G269400 Sobic010G140600 Sobic010G140600 Sobic010G058200--Sobic010G140600 Sobic010G058200--Sobic006G102000 Sobic002G136100 Sobic002G136100 Sobic010G058200--Sobic002G136100 Sobic006G114900--Sobic006G188000 Sobic006G114900--Sobic010G058200 Sobic008G115900 Sobic008G115900 Sobic006G114900--Sobic008G115900 Sobic006G158100 Sobic006G158100 Sobic006G114900--Sobic006G158100 Sobic006G114900--Sobic006G102000 Sobic007G108900 Sobic007G108900 Sobic006G114900--Sobic007G108900 Sobic005G188600 Sobic005G188600 Sobic006G114900--Sobic005G188600 Sobic006G114900--Sobic006G207800 Sobic010G043800 Sobic010G043800 Sobic006G114900--Sobic010G043800 Sobic004G305800 Sobic004G305800 Sobic002G370600--Sobic004G305800 Sobic001G491000 Sobic001G491000 Sobic002G370600--Sobic001G491000 Sobic010G181300 Sobic010G181300 Sobic002G370600--Sobic010G181300 Sobic006G238200 Sobic006G238200 Sobic002G370600--Sobic006G238200 Sobic002G370600--Sobic010G245200 Sobic002G370600--Sobic003G431700 Sobic001G289500 Sobic001G289500 Sobic002G370600--Sobic001G289500 Sobic003G370000 Sobic003G370000 Sobic002G370600--Sobic003G370000 Sobic009G043000 Sobic009G043000 Sobic002G370600--Sobic009G043000 Sobic001G519800 Sobic001G519800 Sobic003G431700--Sobic001G519800 Sobic003G398800 Sobic003G398800 Sobic003G431700--Sobic003G398800 Sobic003G431700--Sobic006G207800 Sobic003G431700--Sobic002G370600 Sobic003G431700--Sobic006G238200 Sobic004G308700 Sobic004G308700 Sobic003G431700--Sobic004G308700 Sobic004G272100 Sobic004G272100 Sobic003G431700--Sobic004G272100 Sobic003G431700--Sobic010G181300 Sobic001G102800 Sobic001G102800 Sobic003G431700--Sobic001G102800 Sobic007G053800--Sobic010G245200 Sobic006G265900 Sobic006G265900 Sobic007G053800--Sobic006G265900 Sobic007G053800--Sobic003G431700 Sobic001G128600 Sobic001G128600 Sobic007G053800--Sobic001G128600 Sobic007G053800--Sobic001G122300 Sobic001G500700 Sobic001G500700 Sobic007G053800--Sobic001G500700 Sobic007G053800--Sobic002G370600 Sobic003G148200 Sobic003G148200 Sobic007G053800--Sobic003G148200 Sobic007G053800--Sobic006G188000 Sobic001G517700--Sobic006G188000 Sobic001G517700--Sobic003G431700 Sobic004G227200 Sobic004G227200 Sobic001G517700--Sobic004G227200 Sobic001G517700--Sobic006G207800 Sobic001G517700--Sobic010G245200 Sobic001G517700--Sobic007G053800 Sobic006G101500 Sobic006G101500 Sobic001G517700--Sobic006G101500 Sobic006G093900 Sobic006G093900 Sobic001G517700--Sobic006G093900 Sobic001G517700--Sobic010G058200 Sobic006G207800--Sobic001G102800 Sobic009G237100 Sobic009G237100 Sobic006G207800--Sobic009G237100 Sobic007G009200 Sobic007G009200 Sobic006G207800--Sobic007G009200 Sobic003G387100 Sobic003G387100 Sobic006G207800--Sobic003G387100 Sobic006G207800--Sobic009G043000 Sobic010G035400 Sobic010G035400 Sobic006G207800--Sobic010G035400 Sobic006G207800--Sobic003G431700 Sobic010G201700 Sobic010G201700 Sobic006G207800--Sobic010G201700 Sobic006G207800--Sobic006G238200 Sobic006G102000--Sobic007G108900 Sobic009G237000 Sobic009G237000 Sobic006G102000--Sobic009G237000 Sobic006G102000--Sobic001G289500 Sobic003G094100 Sobic003G094100 Sobic006G102000--Sobic003G094100 Sobic006G102000--Sobic010G181300 Sobic002G275300 Sobic002G275300 Sobic006G102000--Sobic002G275300 Sobic006G102000--Sobic001G491000 Sobic006G102000--Sobic006G207800 Sobic004G303200 Sobic004G303200 Sobic006G102000--Sobic004G303200
Octagon: transcription factors


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