Gene annotation
Transcriptome id Sobic.004G051100.1
Synonym Sb04g004370
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
-
UniProt C5XVH0
Pfam -
Panther DB PTHR35101 PTHR35101:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a034838 , Zm00025a019039
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.004G051100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G188000 expressed protein -
2 Sobic.002G211000 DUF581 domain containing protein, expressed -
3 Sobic.007G034300 expressed protein -
4 Sobic.010G245200 expressed protein -
5 Sobic.005G202500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tropinone reductase 2, putative, expressed K08081: tropinone reductase I
6 Sobic.001G517700 catalase domain containing protein, expressed K03781: katE, CAT, catB, catalase
7 Sobic.002G370600 - -
8 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -
9 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
10 Sobic.001G391900 nifU, putative, expressed -
11 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
12 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
13 Sobic.009G043000 thioredoxin, putative, expressed -
14 Sobic.005G183400 resistance protein, putative, expressed -
15 Sobic.006G093900 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
16 Sobic.010G181300 SOUL heme-binding protein, putative, expressed -
17 Sobic.008G004700 NC domain-containing protein, putative, expressed -
18 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
19 Sobic.009G140300 MLO domain containing protein, putative, expressed K08472: mlo protein
20 Sobic.004G238600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@starch synthase, putative, expressed K00703: starch synthase


Gene co-expression network
sample Sobic004G051100 Sobic004G051100 Sobic006G188000 Sobic006G188000 Sobic004G051100--Sobic006G188000 Sobic002G211000 Sobic002G211000 Sobic004G051100--Sobic002G211000 Sobic007G034300 Sobic007G034300 Sobic004G051100--Sobic007G034300 Sobic010G245200 Sobic010G245200 Sobic004G051100--Sobic010G245200 Sobic005G202500 Sobic005G202500 Sobic004G051100--Sobic005G202500 Sobic001G517700 Sobic001G517700 Sobic004G051100--Sobic001G517700 Sobic002G370600 Sobic002G370600 Sobic004G051100--Sobic002G370600 Sobic004G283100 Sobic004G283100 Sobic004G051100--Sobic004G283100 Sobic007G053800 Sobic007G053800 Sobic004G051100--Sobic007G053800 Sobic006G188000--Sobic010G245200 Sobic010G058200 Sobic010G058200 Sobic006G188000--Sobic010G058200 Sobic006G114900 Sobic006G114900 Sobic006G188000--Sobic006G114900 Sobic006G188000--Sobic002G370600 Sobic003G431700 Sobic003G431700 Sobic006G188000--Sobic003G431700 Sobic006G188000--Sobic007G053800 Sobic006G188000--Sobic001G517700 Sobic006G207800 Sobic006G207800 Sobic006G188000--Sobic006G207800 Sobic006G102000 Sobic006G102000 Sobic006G188000--Sobic006G102000 Sobic002G211000--Sobic004G051100 Sobic002G211000--Sobic007G034300 Sobic002G211000--Sobic010G245200 Sobic002G211000--Sobic007G053800 Sobic002G211000--Sobic001G517700 Sobic008G053200 Sobic008G053200 Sobic002G211000--Sobic008G053200 Sobic005G183400 Sobic005G183400 Sobic002G211000--Sobic005G183400 Sobic002G211000--Sobic006G188000 Sobic005G165500 Sobic005G165500 Sobic002G211000--Sobic005G165500 Sobic001G520800 Sobic001G520800 Sobic007G034300--Sobic001G520800 Sobic007G034300--Sobic005G165500 Sobic009G244300 Sobic009G244300 Sobic007G034300--Sobic009G244300 Sobic007G034300--Sobic008G053200 Sobic007G034300--Sobic004G283100 Sobic008G104601 Sobic008G104601 Sobic007G034300--Sobic008G104601 Sobic002G233300 Sobic002G233300 Sobic007G034300--Sobic002G233300 Sobic003G231800 Sobic003G231800 Sobic007G034300--Sobic003G231800 Sobic004G305800 Sobic004G305800 Sobic007G034300--Sobic004G305800 Sobic010G245200--Sobic007G053800 Sobic010G245200--Sobic002G370600 Sobic001G005200 Sobic001G005200 Sobic010G245200--Sobic001G005200 Sobic010G245200--Sobic003G431700 Sobic009G140600 Sobic009G140600 Sobic010G245200--Sobic009G140600 Sobic001G122300 Sobic001G122300 Sobic010G245200--Sobic001G122300 Sobic010G245200--Sobic006G188000 Sobic003G378600 Sobic003G378600 Sobic010G245200--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic010G245200--Sobic008G102000 Sobic009G043000 Sobic009G043000 Sobic005G202500--Sobic009G043000 Sobic001G076900 Sobic001G076900 Sobic005G202500--Sobic001G076900 Sobic005G202500--Sobic002G370600 Sobic003G371600 Sobic003G371600 Sobic005G202500--Sobic003G371600 Sobic003G370000 Sobic003G370000 Sobic005G202500--Sobic003G370000 Sobic005G202500--Sobic004G051100 Sobic008G061401 Sobic008G061401 Sobic005G202500--Sobic008G061401 Sobic005G202500--Sobic010G245200 Sobic005G202500--Sobic006G188000 Sobic001G517700--Sobic006G188000 Sobic001G517700--Sobic003G431700 Sobic004G227200 Sobic004G227200 Sobic001G517700--Sobic004G227200 Sobic001G517700--Sobic006G207800 Sobic001G517700--Sobic010G245200 Sobic001G517700--Sobic007G053800 Sobic006G101500 Sobic006G101500 Sobic001G517700--Sobic006G101500 Sobic006G093900 Sobic006G093900 Sobic001G517700--Sobic006G093900 Sobic001G517700--Sobic010G058200 Sobic002G370600--Sobic004G305800 Sobic001G491000 Sobic001G491000 Sobic002G370600--Sobic001G491000 Sobic010G181300 Sobic010G181300 Sobic002G370600--Sobic010G181300 Sobic006G238200 Sobic006G238200 Sobic002G370600--Sobic006G238200 Sobic002G370600--Sobic010G245200 Sobic002G370600--Sobic003G431700 Sobic001G289500 Sobic001G289500 Sobic002G370600--Sobic001G289500 Sobic002G370600--Sobic003G370000 Sobic002G370600--Sobic009G043000 Sobic004G272100 Sobic004G272100 Sobic004G283100--Sobic004G272100 Sobic004G283100--Sobic008G053200 Sobic004G283100--Sobic004G305800 Sobic004G238600 Sobic004G238600 Sobic004G283100--Sobic004G238600 Sobic010G201700 Sobic010G201700 Sobic004G283100--Sobic010G201700 Sobic001G329400 Sobic001G329400 Sobic004G283100--Sobic001G329400 Sobic004G283100--Sobic002G370600 Sobic004G283100--Sobic009G043000 Sobic009G129300 Sobic009G129300 Sobic004G283100--Sobic009G129300 Sobic007G053800--Sobic010G245200 Sobic006G265900 Sobic006G265900 Sobic007G053800--Sobic006G265900 Sobic007G053800--Sobic003G431700 Sobic001G128600 Sobic001G128600 Sobic007G053800--Sobic001G128600 Sobic007G053800--Sobic001G122300 Sobic001G500700 Sobic001G500700 Sobic007G053800--Sobic001G500700 Sobic007G053800--Sobic002G370600 Sobic003G148200 Sobic003G148200 Sobic007G053800--Sobic003G148200 Sobic007G053800--Sobic006G188000
Octagon: transcription factors


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