Gene annotation
Transcriptome id Sobic.002G211000.1
Synonym Sb02g025470
Functional annotation DUF581 domain containing protein, expressed
UniProt C5XDK6
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G74940 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os09g26370.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a005783 , Zm00025a047115
Brachypodium -
Barley HORVU5Hr1G063320.5 , HORVU5Hr1G063320.4 , HORVU5Hr1G063320.1 , HORVU5Hr1G063320.3 , HORVU5Hr1G063320.2
Wheat TraesCS5B02G215300 , TraesCS5D02G224500 , TraesCS5A02G216400 , TraesCS5A02G216400
Populus -


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cDNA sequences
Sobic.002G211000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G051100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
2 Sobic.007G034300 expressed protein -
3 Sobic.010G245200 expressed protein -
4 Sobic.007G053800 RNA polymerase sigma factor, putative, expressed K03086: RNA polymerase primary sigma factor
5 Sobic.001G517700 catalase domain containing protein, expressed K03781: katE, CAT, catB, catalase
6 Sobic.008G053200 fructose-bisphosphate aldolase 2(PubMedID : 26465154)@fructose-bisphosphate aldolase 2("PubMedID : 26759170,PubMedID : 24597475")@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
7 Sobic.005G183400 resistance protein, putative, expressed -
8 Sobic.006G188000 expressed protein -
9 Sobic.005G165500 OsSub17 - Putative Subtilisin homologue, expressed -
10 Sobic.003G431700 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
11 Sobic.007G207800 thylakoid lumen protein, chloroplast precursor, putative, expressed -
12 Sobic.002G030500 Reticulon family protein(PubMedID : 26465154)@reticulon domain containing protein, putative, expressed -
13 Sobic.004G097000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@F-box family protein, putative, expressed -
14 Sobic.009G029001 - -
15 Sobic.002G370600 - -
16 Sobic.001G519800 glyceraldehyde-3-phosphate dehydrogenase, putative, expressed K05298: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating)
17 Sobic.007G223500 expressed protein -
18 Sobic.007G141700 hcr2-5D, putative, expressed -
19 Sobic.001G391900 nifU, putative, expressed -
20 Sobic.004G283100 -(PubMedID : 26465154)@expressed protein -


Gene co-expression network
sample Sobic002G211000 Sobic002G211000 Sobic004G051100 Sobic004G051100 Sobic002G211000--Sobic004G051100 Sobic007G034300 Sobic007G034300 Sobic002G211000--Sobic007G034300 Sobic010G245200 Sobic010G245200 Sobic002G211000--Sobic010G245200 Sobic007G053800 Sobic007G053800 Sobic002G211000--Sobic007G053800 Sobic001G517700 Sobic001G517700 Sobic002G211000--Sobic001G517700 Sobic008G053200 Sobic008G053200 Sobic002G211000--Sobic008G053200 Sobic005G183400 Sobic005G183400 Sobic002G211000--Sobic005G183400 Sobic006G188000 Sobic006G188000 Sobic002G211000--Sobic006G188000 Sobic005G165500 Sobic005G165500 Sobic002G211000--Sobic005G165500 Sobic004G051100--Sobic006G188000 Sobic004G051100--Sobic002G211000 Sobic004G051100--Sobic007G034300 Sobic004G051100--Sobic010G245200 Sobic005G202500 Sobic005G202500 Sobic004G051100--Sobic005G202500 Sobic004G051100--Sobic001G517700 Sobic002G370600 Sobic002G370600 Sobic004G051100--Sobic002G370600 Sobic004G283100 Sobic004G283100 Sobic004G051100--Sobic004G283100 Sobic004G051100--Sobic007G053800 Sobic001G520800 Sobic001G520800 Sobic007G034300--Sobic001G520800 Sobic007G034300--Sobic005G165500 Sobic009G244300 Sobic009G244300 Sobic007G034300--Sobic009G244300 Sobic007G034300--Sobic008G053200 Sobic007G034300--Sobic004G283100 Sobic008G104601 Sobic008G104601 Sobic007G034300--Sobic008G104601 Sobic002G233300 Sobic002G233300 Sobic007G034300--Sobic002G233300 Sobic003G231800 Sobic003G231800 Sobic007G034300--Sobic003G231800 Sobic004G305800 Sobic004G305800 Sobic007G034300--Sobic004G305800 Sobic010G245200--Sobic007G053800 Sobic010G245200--Sobic002G370600 Sobic001G005200 Sobic001G005200 Sobic010G245200--Sobic001G005200 Sobic003G431700 Sobic003G431700 Sobic010G245200--Sobic003G431700 Sobic009G140600 Sobic009G140600 Sobic010G245200--Sobic009G140600 Sobic001G122300 Sobic001G122300 Sobic010G245200--Sobic001G122300 Sobic010G245200--Sobic006G188000 Sobic003G378600 Sobic003G378600 Sobic010G245200--Sobic003G378600 Sobic008G102000 Sobic008G102000 Sobic010G245200--Sobic008G102000 Sobic007G053800--Sobic010G245200 Sobic006G265900 Sobic006G265900 Sobic007G053800--Sobic006G265900 Sobic007G053800--Sobic003G431700 Sobic001G128600 Sobic001G128600 Sobic007G053800--Sobic001G128600 Sobic007G053800--Sobic001G122300 Sobic001G500700 Sobic001G500700 Sobic007G053800--Sobic001G500700 Sobic007G053800--Sobic002G370600 Sobic003G148200 Sobic003G148200 Sobic007G053800--Sobic003G148200 Sobic007G053800--Sobic006G188000 Sobic001G517700--Sobic006G188000 Sobic001G517700--Sobic003G431700 Sobic004G227200 Sobic004G227200 Sobic001G517700--Sobic004G227200 Sobic006G207800 Sobic006G207800 Sobic001G517700--Sobic006G207800 Sobic001G517700--Sobic010G245200 Sobic001G517700--Sobic007G053800 Sobic006G101500 Sobic006G101500 Sobic001G517700--Sobic006G101500 Sobic006G093900 Sobic006G093900 Sobic001G517700--Sobic006G093900 Sobic010G058200 Sobic010G058200 Sobic001G517700--Sobic010G058200 Sobic003G431900 Sobic003G431900 Sobic008G053200--Sobic003G431900 Sobic001G519800 Sobic001G519800 Sobic008G053200--Sobic001G519800 Sobic003G234200 Sobic003G234200 Sobic008G053200--Sobic003G234200 Sobic002G036000 Sobic002G036000 Sobic008G053200--Sobic002G036000 Sobic004G238600 Sobic004G238600 Sobic008G053200--Sobic004G238600 Sobic008G053200--Sobic004G283100 Sobic004G272100 Sobic004G272100 Sobic008G053200--Sobic004G272100 Sobic004G308700 Sobic004G308700 Sobic008G053200--Sobic004G308700 Sobic005G089600 Sobic005G089600 Sobic008G053200--Sobic005G089600 Sobic004G214900 Sobic004G214900 Sobic005G183400--Sobic004G214900 Sobic005G183400--Sobic002G211000 Sobic006G147300 Sobic006G147300 Sobic005G183400--Sobic006G147300 Sobic004G125200 Sobic004G125200 Sobic005G183400--Sobic004G125200 Sobic006G272900 Sobic006G272900 Sobic005G183400--Sobic006G272900 Sobic005G183400--Sobic007G034300 Sobic007G071500 Sobic007G071500 Sobic005G183400--Sobic007G071500 Sobic009G029001 Sobic009G029001 Sobic005G183400--Sobic009G029001 Sobic005G183400--Sobic004G051100 Sobic006G188000--Sobic010G245200 Sobic006G188000--Sobic010G058200 Sobic006G114900 Sobic006G114900 Sobic006G188000--Sobic006G114900 Sobic006G188000--Sobic002G370600 Sobic006G188000--Sobic003G431700 Sobic006G188000--Sobic007G053800 Sobic006G188000--Sobic001G517700 Sobic006G188000--Sobic006G207800 Sobic006G102000 Sobic006G102000 Sobic006G188000--Sobic006G102000 Sobic005G165500--Sobic004G305800 Sobic005G165500--Sobic003G431900 Sobic005G165500--Sobic008G053200 Sobic005G165500--Sobic003G234200 Sobic009G129300 Sobic009G129300 Sobic005G165500--Sobic009G129300 Sobic005G165500--Sobic007G034300 Sobic010G201700 Sobic010G201700 Sobic005G165500--Sobic010G201700 Sobic003G398800 Sobic003G398800 Sobic005G165500--Sobic003G398800 Sobic005G165500--Sobic004G272100
Octagon: transcription factors


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