Gene annotation
Transcriptome id Sobic.008G004700.1
Synonym
Functional annotation NC domain-containing protein, putative, expressed
UniProt C5YQ17
Pfam PF04970
Panther DB PTHR13943 PTHR13943:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06370 : NC domain-containing protein-related
RAP-DB (Rice) LOC_Os05g24560.1 : NC domain-containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
2 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
3 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
4 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
5 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
6 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
7 Sobic.002G136100 genetic modifier, putative, expressed -
8 Sobic.003G284800 heat shock protein DnaJ, putative, expressed -
9 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
10 Sobic.006G026100 expressed protein -
11 Sobic.006G188000 expressed protein -
12 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
13 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
14 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
15 Sobic.006G123500 peptide methionine sulfoxide reductase, putative, expressed K07304: peptide-methionine (S)-S-oxide reductase
16 Sobic.006G050400 expressed protein -
17 Sobic.004G051100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
18 Sobic.009G141400 transcriptional regulator, putative, expressed -
19 Sobic.003G125400 Fe-S metabolism associated domain containing protein, expressed -
20 Sobic.004G154400 drought-induced protein 1, putative, expressed -


Gene co-expression network
sample Sobic008G004700 Sobic008G004700 Sobic010G269400 Sobic010G269400 Sobic008G004700--Sobic010G269400 Sobic010G058200 Sobic010G058200 Sobic008G004700--Sobic010G058200 Sobic002G046900 Sobic002G046900 Sobic008G004700--Sobic002G046900 Sobic001G286600 Sobic001G286600 Sobic008G004700--Sobic001G286600 Sobic010G035500 Sobic010G035500 Sobic008G004700--Sobic010G035500 Sobic006G258700 Sobic006G258700 Sobic008G004700--Sobic006G258700 Sobic002G136100 Sobic002G136100 Sobic008G004700--Sobic002G136100 Sobic003G284800 Sobic003G284800 Sobic008G004700--Sobic003G284800 Sobic006G110900 Sobic006G110900 Sobic008G004700--Sobic006G110900 Sobic010G269400--Sobic001G286600 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G269400--Sobic010G058200 Sobic003G037300 Sobic003G037300 Sobic010G269400--Sobic003G037300 Sobic003G014300 Sobic003G014300 Sobic010G269400--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic010G269400--Sobic002G102200 Sobic010G269400--Sobic006G110900 Sobic009G062400 Sobic009G062400 Sobic010G269400--Sobic009G062400 Sobic010G058200--Sobic001G286600 Sobic006G188000 Sobic006G188000 Sobic010G058200--Sobic006G188000 Sobic004G154400 Sobic004G154400 Sobic010G058200--Sobic004G154400 Sobic010G058200--Sobic002G102200 Sobic010G058200--Sobic009G062400 Sobic010G058200--Sobic010G269400 Sobic010G058200--Sobic010G140600 Sobic006G102000 Sobic006G102000 Sobic010G058200--Sobic006G102000 Sobic010G058200--Sobic002G136100 Sobic006G201100 Sobic006G201100 Sobic002G046900--Sobic006G201100 Sobic005G175600 Sobic005G175600 Sobic002G046900--Sobic005G175600 Sobic002G046900--Sobic010G035500 Sobic002G046900--Sobic006G110900 Sobic004G224500 Sobic004G224500 Sobic002G046900--Sobic004G224500 Sobic006G123500 Sobic006G123500 Sobic002G046900--Sobic006G123500 Sobic010G207500 Sobic010G207500 Sobic002G046900--Sobic010G207500 Sobic001G404500 Sobic001G404500 Sobic002G046900--Sobic001G404500 Sobic005G203300 Sobic005G203300 Sobic002G046900--Sobic005G203300 Sobic001G286600--Sobic004G154400 Sobic001G286600--Sobic009G062400 Sobic001G286600--Sobic010G269400 Sobic001G286600--Sobic010G058200 Sobic001G118400 Sobic001G118400 Sobic001G286600--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic001G286600--Sobic003G328100 Sobic006G155500 Sobic006G155500 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic003G070900 Sobic003G070900 Sobic001G286600--Sobic003G070900 Sobic004G300000 Sobic004G300000 Sobic010G035500--Sobic004G300000 Sobic001G029200 Sobic001G029200 Sobic010G035500--Sobic001G029200 Sobic006G214700 Sobic006G214700 Sobic010G035500--Sobic006G214700 Sobic002G025700 Sobic002G025700 Sobic010G035500--Sobic002G025700 Sobic010G035500--Sobic006G201100 Sobic009G141400 Sobic009G141400 Sobic010G035500--Sobic009G141400 Sobic009G019100 Sobic009G019100 Sobic010G035500--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic010G035500--Sobic008G081900 Sobic006G193200 Sobic006G193200 Sobic010G035500--Sobic006G193200 Sobic006G258700--Sobic003G014300 Sobic006G258700--Sobic010G269400 Sobic004G298900 Sobic004G298900 Sobic006G258700--Sobic004G298900 Sobic001G351400 Sobic001G351400 Sobic006G258700--Sobic001G351400 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic006G258700--Sobic004G300000 Sobic006G258700--Sobic001G286600 Sobic006G258700--Sobic001G404500 Sobic002G136100--Sobic004G154400 Sobic006G212800 Sobic006G212800 Sobic002G136100--Sobic006G212800 Sobic009G207900 Sobic009G207900 Sobic002G136100--Sobic009G207900 Sobic002G136100--Sobic010G058200 Sobic002G136100--Sobic001G286600 Sobic002G136100--Sobic003G328100 Sobic002G136100--Sobic009G062400 Sobic003G157900 Sobic003G157900 Sobic002G136100--Sobic003G157900 Sobic007G015500 Sobic007G015500 Sobic002G136100--Sobic007G015500 Sobic002G112400 Sobic002G112400 Sobic003G284800--Sobic002G112400 Sobic003G284800--Sobic009G062400 Sobic003G253300 Sobic003G253300 Sobic003G284800--Sobic003G253300 Sobic006G265900 Sobic006G265900 Sobic003G284800--Sobic006G265900 Sobic002G061900 Sobic002G061900 Sobic003G284800--Sobic002G061900 Sobic006G097500 Sobic006G097500 Sobic003G284800--Sobic006G097500 Sobic007G053800 Sobic007G053800 Sobic003G284800--Sobic007G053800 Sobic001G128600 Sobic001G128600 Sobic003G284800--Sobic001G128600 Sobic008G006100 Sobic008G006100 Sobic003G284800--Sobic008G006100 Sobic006G110900--Sobic003G253300 Sobic006G110900--Sobic001G286600 Sobic006G110900--Sobic006G155500 Sobic006G110900--Sobic006G214700 Sobic008G063200 Sobic008G063200 Sobic006G110900--Sobic008G063200 Sobic006G110900--Sobic001G118400 Sobic006G110900--Sobic004G224500 Sobic006G110900--Sobic003G328100 Sobic006G050400 Sobic006G050400 Sobic006G110900--Sobic006G050400
Octagon: transcription factors


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