Gene annotation
Transcriptome id Sobic.010G269400.2
Synonym Sb10g030440
Functional annotation DNL zinc finger domain containing protein, putative, expressed
UniProt A0A1W0VV16
Pfam PF05180
Panther DB PTHR20922 PTHR20922:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT5G27280 : Zim17-type zinc finger protein
RAP-DB (Rice) LOC_Os06g50870.1 : DNL zinc finger domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a018510 , Zm00025a041709
Brachypodium -
Barley -
Wheat TraesCS7B02G465000 , TraesCS7D02G528600 , TraesCS7D02G528600
Populus -


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cDNA sequences
Sobic.010G269400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
2 Sobic.006G258700 Alternative oxidase family protein(PubMedID : 26465154)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
3 Sobic.010G140600 bolA, putative, expressed -
4 Sobic.010G058200 sulfiredoxin-1, putative, expressed K12260: sulfiredoxin
5 Sobic.003G037300 Twin LOV 1, putative, expressed -
6 Sobic.003G014300 expressed protein -
7 Sobic.002G102200 acetyltransferase, GNAT family, putative, expressed -
8 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
9 Sobic.009G062400 uvrB/uvrC motif family protein, expressed -
10 Sobic.004G298900 OR, putative, expressed -
11 Sobic.008G063200 expressed protein -
12 Sobic.004G154400 drought-induced protein 1, putative, expressed -
13 Sobic.002G136100 genetic modifier, putative, expressed -
14 Sobic.009G141400 transcriptional regulator, putative, expressed -
15 Sobic.009G034600 expressed protein -
16 Sobic.008G004700 NC domain-containing protein, putative, expressed -
17 Sobic.001G517700 catalase domain containing protein, expressed K03781: katE, CAT, catB, catalase
18 Sobic.001G404500 gamma-interferon-inducible lysosomal thiol reductase precursor, putative, expressed K08059: IFI30, interferon, gamma-inducible protein 30
19 Sobic.003G345500 ureidoglycolate hydrolase, putative, expressed -
20 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein


Gene co-expression network
sample Sobic010G269400 Sobic010G269400 Sobic001G286600 Sobic001G286600 Sobic010G269400--Sobic001G286600 Sobic006G258700 Sobic006G258700 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G058200 Sobic010G058200 Sobic010G269400--Sobic010G058200 Sobic003G037300 Sobic003G037300 Sobic010G269400--Sobic003G037300 Sobic003G014300 Sobic003G014300 Sobic010G269400--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic010G269400--Sobic002G102200 Sobic006G110900 Sobic006G110900 Sobic010G269400--Sobic006G110900 Sobic009G062400 Sobic009G062400 Sobic010G269400--Sobic009G062400 Sobic004G154400 Sobic004G154400 Sobic001G286600--Sobic004G154400 Sobic001G286600--Sobic009G062400 Sobic001G286600--Sobic010G269400 Sobic001G286600--Sobic010G058200 Sobic001G118400 Sobic001G118400 Sobic001G286600--Sobic001G118400 Sobic003G328100 Sobic003G328100 Sobic001G286600--Sobic003G328100 Sobic006G155500 Sobic006G155500 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic003G070900 Sobic003G070900 Sobic001G286600--Sobic003G070900 Sobic006G258700--Sobic003G014300 Sobic006G258700--Sobic010G269400 Sobic004G298900 Sobic004G298900 Sobic006G258700--Sobic004G298900 Sobic001G351400 Sobic001G351400 Sobic006G258700--Sobic001G351400 Sobic006G258700--Sobic003G037300 Sobic010G189200 Sobic010G189200 Sobic006G258700--Sobic010G189200 Sobic004G300000 Sobic004G300000 Sobic006G258700--Sobic004G300000 Sobic006G258700--Sobic001G286600 Sobic001G404500 Sobic001G404500 Sobic006G258700--Sobic001G404500 Sobic010G140600--Sobic010G269400 Sobic010G140600--Sobic010G058200 Sobic010G140600--Sobic001G286600 Sobic004G281900 Sobic004G281900 Sobic010G140600--Sobic004G281900 Sobic004G238200 Sobic004G238200 Sobic010G140600--Sobic004G238200 Sobic010G140600--Sobic002G102200 Sobic001G072700 Sobic001G072700 Sobic010G140600--Sobic001G072700 Sobic010G140600--Sobic006G155500 Sobic008G144800 Sobic008G144800 Sobic010G140600--Sobic008G144800 Sobic010G058200--Sobic001G286600 Sobic006G188000 Sobic006G188000 Sobic010G058200--Sobic006G188000 Sobic010G058200--Sobic004G154400 Sobic010G058200--Sobic002G102200 Sobic010G058200--Sobic009G062400 Sobic010G058200--Sobic010G269400 Sobic010G058200--Sobic010G140600 Sobic006G102000 Sobic006G102000 Sobic010G058200--Sobic006G102000 Sobic002G136100 Sobic002G136100 Sobic010G058200--Sobic002G136100 Sobic003G037300--Sobic004G298900 Sobic003G037300--Sobic009G062400 Sobic008G006100 Sobic008G006100 Sobic003G037300--Sobic008G006100 Sobic003G037300--Sobic010G269400 Sobic009G207900 Sobic009G207900 Sobic003G037300--Sobic009G207900 Sobic003G037300--Sobic004G154400 Sobic010G076800 Sobic010G076800 Sobic003G037300--Sobic010G076800 Sobic001G521200 Sobic001G521200 Sobic003G037300--Sobic001G521200 Sobic003G037300--Sobic001G286600 Sobic003G014300--Sobic006G258700 Sobic003G014300--Sobic004G298900 Sobic003G014300--Sobic010G269400 Sobic003G014300--Sobic004G300000 Sobic003G014300--Sobic003G037300 Sobic001G512500 Sobic001G512500 Sobic003G014300--Sobic001G512500 Sobic005G175500 Sobic005G175500 Sobic003G014300--Sobic005G175500 Sobic010G035500 Sobic010G035500 Sobic003G014300--Sobic010G035500 Sobic004G151500 Sobic004G151500 Sobic003G014300--Sobic004G151500 Sobic006G101500 Sobic006G101500 Sobic002G102200--Sobic006G101500 Sobic001G391900 Sobic001G391900 Sobic002G102200--Sobic001G391900 Sobic003G387100 Sobic003G387100 Sobic002G102200--Sobic003G387100 Sobic001G124800 Sobic001G124800 Sobic002G102200--Sobic001G124800 Sobic002G102200--Sobic010G058200 Sobic006G050400 Sobic006G050400 Sobic002G102200--Sobic006G050400 Sobic002G102200--Sobic008G006100 Sobic008G063200 Sobic008G063200 Sobic002G102200--Sobic008G063200 Sobic009G059300 Sobic009G059300 Sobic002G102200--Sobic009G059300 Sobic003G253300 Sobic003G253300 Sobic006G110900--Sobic003G253300 Sobic006G110900--Sobic001G286600 Sobic006G110900--Sobic006G155500 Sobic006G214700 Sobic006G214700 Sobic006G110900--Sobic006G214700 Sobic006G110900--Sobic008G063200 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic006G110900--Sobic003G328100 Sobic006G110900--Sobic006G050400 Sobic009G062400--Sobic008G006100 Sobic002G112400 Sobic002G112400 Sobic009G062400--Sobic002G112400 Sobic009G062400--Sobic009G207900 Sobic009G219100 Sobic009G219100 Sobic009G062400--Sobic009G219100 Sobic009G062400--Sobic003G037300 Sobic009G062400--Sobic004G154400 Sobic009G062400--Sobic001G286600 Sobic003G345500 Sobic003G345500 Sobic009G062400--Sobic003G345500 Sobic003G284800 Sobic003G284800 Sobic009G062400--Sobic003G284800
Octagon: transcription factors


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