Gene annotation
Transcriptome id Sobic.009G141400.2,Sobic.009G141400.1
Synonym Sb09g020680
Functional annotation transcriptional regulator, putative, expressed
UniProt C5YY61 , A0A1Z5R2M1
Pfam PF02622
Panther DB PTHR31984 PTHR31984:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G33780 : Protein of unknown function (DUF179)
RAP-DB (Rice) LOC_Os05g34720.1 : transcriptional regulator, putative, expressed
MaizeGDB (Corn) Zm00025a037394
Brachypodium -
Barley HORVU1Hr1G064040.4 , HORVU1Hr1G064040.3 , HORVU1Hr1G064040.2 , HORVU1Hr1G064040.7 , HORVU1Hr1G064040.9 , HORVU1Hr1G064040.8
Wheat TraesCS1D02G263100 , TraesCS1A02G263000 , TraesCS1A02G263000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G214700 APO, putative, expressed -
2 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.006G155500 expressed protein -
4 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
5 Sobic.010G269400 DNL zinc finger domain containing protein, putative, expressed -
6 Sobic.004G324100 diacylglycerol kinase, putative, expressed K00901: dgkA, diacylglycerol kinase (ATP)
7 Sobic.008G063200 expressed protein -
8 Sobic.003G253300 ATP synthase protein I related, putative, expressed K02116: ATP synthase protein I
9 Sobic.001G286600 PAP fibrillin family domain containing protein, expressed -
10 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
11 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
12 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
13 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
14 Sobic.009G079950 - -
15 Sobic.006G193200 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
16 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
17 Sobic.001G118400 expressed protein -
18 Sobic.010G140600 bolA, putative, expressed -
19 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
20 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin


Gene co-expression network
sample Sobic009G141400 Sobic009G141400 Sobic006G214700 Sobic006G214700 Sobic009G141400--Sobic006G214700 Sobic006G110900 Sobic006G110900 Sobic009G141400--Sobic006G110900 Sobic006G155500 Sobic006G155500 Sobic009G141400--Sobic006G155500 Sobic010G035500 Sobic010G035500 Sobic009G141400--Sobic010G035500 Sobic010G269400 Sobic010G269400 Sobic009G141400--Sobic010G269400 Sobic004G324100 Sobic004G324100 Sobic009G141400--Sobic004G324100 Sobic008G063200 Sobic008G063200 Sobic009G141400--Sobic008G063200 Sobic003G253300 Sobic003G253300 Sobic009G141400--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic009G141400--Sobic001G286600 Sobic003G179400 Sobic003G179400 Sobic006G214700--Sobic003G179400 Sobic001G450600 Sobic001G450600 Sobic006G214700--Sobic001G450600 Sobic002G331800 Sobic002G331800 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G214700--Sobic006G110900 Sobic004G333400 Sobic004G333400 Sobic006G214700--Sobic004G333400 Sobic006G214700--Sobic003G253300 Sobic006G214700--Sobic008G063200 Sobic010G076800 Sobic010G076800 Sobic006G214700--Sobic010G076800 Sobic006G110900--Sobic003G253300 Sobic006G110900--Sobic001G286600 Sobic006G110900--Sobic006G155500 Sobic006G110900--Sobic006G214700 Sobic006G110900--Sobic008G063200 Sobic001G118400 Sobic001G118400 Sobic006G110900--Sobic001G118400 Sobic004G224500 Sobic004G224500 Sobic006G110900--Sobic004G224500 Sobic003G328100 Sobic003G328100 Sobic006G110900--Sobic003G328100 Sobic006G050400 Sobic006G050400 Sobic006G110900--Sobic006G050400 Sobic006G155500--Sobic001G118400 Sobic006G155500--Sobic006G050400 Sobic006G155500--Sobic003G328100 Sobic006G155500--Sobic003G253300 Sobic006G155500--Sobic001G286600 Sobic006G155500--Sobic006G110900 Sobic002G061900 Sobic002G061900 Sobic006G155500--Sobic002G061900 Sobic003G070900 Sobic003G070900 Sobic006G155500--Sobic003G070900 Sobic006G097500 Sobic006G097500 Sobic006G155500--Sobic006G097500 Sobic004G300000 Sobic004G300000 Sobic010G035500--Sobic004G300000 Sobic001G029200 Sobic001G029200 Sobic010G035500--Sobic001G029200 Sobic010G035500--Sobic006G214700 Sobic002G025700 Sobic002G025700 Sobic010G035500--Sobic002G025700 Sobic006G201100 Sobic006G201100 Sobic010G035500--Sobic006G201100 Sobic010G035500--Sobic009G141400 Sobic009G019100 Sobic009G019100 Sobic010G035500--Sobic009G019100 Sobic008G081900 Sobic008G081900 Sobic010G035500--Sobic008G081900 Sobic006G193200 Sobic006G193200 Sobic010G035500--Sobic006G193200 Sobic010G269400--Sobic001G286600 Sobic006G258700 Sobic006G258700 Sobic010G269400--Sobic006G258700 Sobic010G140600 Sobic010G140600 Sobic010G269400--Sobic010G140600 Sobic010G058200 Sobic010G058200 Sobic010G269400--Sobic010G058200 Sobic003G037300 Sobic003G037300 Sobic010G269400--Sobic003G037300 Sobic003G014300 Sobic003G014300 Sobic010G269400--Sobic003G014300 Sobic002G102200 Sobic002G102200 Sobic010G269400--Sobic002G102200 Sobic010G269400--Sobic006G110900 Sobic009G062400 Sobic009G062400 Sobic010G269400--Sobic009G062400 Sobic004G324100--Sobic006G155500 Sobic004G324100--Sobic009G141400 Sobic004G324100--Sobic001G118400 Sobic004G324100--Sobic003G328100 Sobic006G140700 Sobic006G140700 Sobic004G324100--Sobic006G140700 Sobic008G037800 Sobic008G037800 Sobic004G324100--Sobic008G037800 Sobic004G281900 Sobic004G281900 Sobic004G324100--Sobic004G281900 Sobic006G026100 Sobic006G026100 Sobic004G324100--Sobic006G026100 Sobic004G324100--Sobic001G286600 Sobic008G063200--Sobic001G450600 Sobic008G063200--Sobic006G110900 Sobic008G063200--Sobic006G214700 Sobic001G006000 Sobic001G006000 Sobic008G063200--Sobic001G006000 Sobic008G063200--Sobic002G102200 Sobic008G063200--Sobic003G253300 Sobic008G063200--Sobic010G076800 Sobic008G063200--Sobic004G333400 Sobic003G342200 Sobic003G342200 Sobic008G063200--Sobic003G342200 Sobic003G253300--Sobic003G342200 Sobic003G253300--Sobic006G110900 Sobic003G253300--Sobic006G155500 Sobic003G253300--Sobic006G050400 Sobic003G253300--Sobic006G214700 Sobic003G284800 Sobic003G284800 Sobic003G253300--Sobic003G284800 Sobic003G253300--Sobic008G063200 Sobic003G253300--Sobic001G118400 Sobic003G253300--Sobic010G076800 Sobic004G154400 Sobic004G154400 Sobic001G286600--Sobic004G154400 Sobic001G286600--Sobic009G062400 Sobic001G286600--Sobic010G269400 Sobic001G286600--Sobic010G058200 Sobic001G286600--Sobic001G118400 Sobic001G286600--Sobic003G328100 Sobic001G286600--Sobic006G155500 Sobic001G286600--Sobic006G110900 Sobic001G286600--Sobic003G070900
Octagon: transcription factors


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