Gene annotation
Transcriptome id Sobic.009G079950.1
Synonym -
Functional annotation -
UniProt A0A1Z5R2M8
Pfam PF13266
Panther DB PTHR31132
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39860 : -
RAP-DB (Rice) LOC_Os04g38310.1 : expressed protein
MaizeGDB (Corn) Zm00025a011148 , Zm00025a056181
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G141400 transcriptional regulator, putative, expressed -
2 Sobic.003G306700 acetamidase, putative, expressed K01455: formamidase
3 Sobic.006G214700 APO, putative, expressed -
4 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
5 Sobic.004G300000 OsFtsH7 FtsH protease, homologue of AtFtsH7, expressed K03798: ftsH, cell division protease FtsH
6 Sobic.001G207200 MEE12, putative, expressed -
7 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
8 Sobic.010G207500 homeobox protein knotted-1, putative, expressed -
9 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
10 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
11 Sobic.008G193300 sucrose transporters("PubMedID : 27986867,PubMedID : 23805151")@Sucrose transporter genes(PubMedID : 24456189)@Sugar transporter(PubMedID : 27330561)@"OsSUT2(Ortholog in rice:Eom et al., 2011)"(PubMedID : 31659914)@sucrose transporter, putativ, expressed K15378: solute carrier family 45, member 1/2/4
12 Sobic.002G386400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
13 Sobic.010G035500 IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed K13628: iron-sulfur cluster assembly protein
14 Sobic.006G110900 acetyltransferase, GNAT family, putative, expressed -
15 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
16 Sobic.003G208300 PPR repeat domain containing protein, putative, expressed -
17 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
18 Sobic.010G189200 pentatricopeptide, putative, expressed -
19 Sobic.002G331800 PPR repeat containing protein, expressed -
20 Sobic.010G197000 M16 domain containing zinc peptidase, putative, expressed -


Gene co-expression network
sample Sobic009G079950 Sobic009G079950 Sobic009G141400 Sobic009G141400 Sobic009G079950--Sobic009G141400 Sobic003G306700 Sobic003G306700 Sobic009G079950--Sobic003G306700 Sobic006G214700 Sobic006G214700 Sobic009G079950--Sobic006G214700 Sobic010G231100 Sobic010G231100 Sobic009G079950--Sobic010G231100 Sobic004G300000 Sobic004G300000 Sobic009G079950--Sobic004G300000 Sobic001G207200 Sobic001G207200 Sobic009G079950--Sobic001G207200 Sobic006G201100 Sobic006G201100 Sobic009G079950--Sobic006G201100 Sobic010G207500 Sobic010G207500 Sobic009G079950--Sobic010G207500 Sobic001G450600 Sobic001G450600 Sobic009G079950--Sobic001G450600 Sobic009G141400--Sobic006G214700 Sobic006G110900 Sobic006G110900 Sobic009G141400--Sobic006G110900 Sobic006G155500 Sobic006G155500 Sobic009G141400--Sobic006G155500 Sobic010G035500 Sobic010G035500 Sobic009G141400--Sobic010G035500 Sobic010G269400 Sobic010G269400 Sobic009G141400--Sobic010G269400 Sobic004G324100 Sobic004G324100 Sobic009G141400--Sobic004G324100 Sobic008G063200 Sobic008G063200 Sobic009G141400--Sobic008G063200 Sobic003G253300 Sobic003G253300 Sobic009G141400--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic009G141400--Sobic001G286600 Sobic003G306700--Sobic004G300000 Sobic003G306700--Sobic006G201100 Sobic003G306700--Sobic010G035500 Sobic003G306700--Sobic006G214700 Sobic003G306700--Sobic009G079950 Sobic002G025700 Sobic002G025700 Sobic003G306700--Sobic002G025700 Sobic002G331800 Sobic002G331800 Sobic003G306700--Sobic002G331800 Sobic003G306700--Sobic006G110900 Sobic004G164200 Sobic004G164200 Sobic003G306700--Sobic004G164200 Sobic003G179400 Sobic003G179400 Sobic006G214700--Sobic003G179400 Sobic006G214700--Sobic001G450600 Sobic006G214700--Sobic002G331800 Sobic005G028900 Sobic005G028900 Sobic006G214700--Sobic005G028900 Sobic006G214700--Sobic006G110900 Sobic004G333400 Sobic004G333400 Sobic006G214700--Sobic004G333400 Sobic006G214700--Sobic003G253300 Sobic006G214700--Sobic008G063200 Sobic010G076800 Sobic010G076800 Sobic006G214700--Sobic010G076800 Sobic010G231100--Sobic003G179400 Sobic010G231100--Sobic001G207200 Sobic010G231100--Sobic006G214700 Sobic010G231100--Sobic005G028900 Sobic009G036300 Sobic009G036300 Sobic010G231100--Sobic009G036300 Sobic010G231100--Sobic009G079950 Sobic010G231100--Sobic009G141400 Sobic006G024500 Sobic006G024500 Sobic010G231100--Sobic006G024500 Sobic010G231100--Sobic001G450600 Sobic004G300000--Sobic010G035500 Sobic004G300000--Sobic002G025700 Sobic006G193200 Sobic006G193200 Sobic004G300000--Sobic006G193200 Sobic004G300000--Sobic006G214700 Sobic003G108900 Sobic003G108900 Sobic004G300000--Sobic003G108900 Sobic010G197000 Sobic010G197000 Sobic004G300000--Sobic010G197000 Sobic004G165900 Sobic004G165900 Sobic004G300000--Sobic004G165900 Sobic003G014300 Sobic003G014300 Sobic004G300000--Sobic003G014300 Sobic002G354600 Sobic002G354600 Sobic004G300000--Sobic002G354600 Sobic010G211500 Sobic010G211500 Sobic001G207200--Sobic010G211500 Sobic001G207200--Sobic010G231100 Sobic001G501300 Sobic001G501300 Sobic001G207200--Sobic001G501300 Sobic001G207200--Sobic009G036300 Sobic008G165900 Sobic008G165900 Sobic001G207200--Sobic008G165900 Sobic009G052700 Sobic009G052700 Sobic001G207200--Sobic009G052700 Sobic001G207200--Sobic009G079950 Sobic003G332900 Sobic003G332900 Sobic001G207200--Sobic003G332900 Sobic001G224200 Sobic001G224200 Sobic001G207200--Sobic001G224200 Sobic006G201100--Sobic010G035500 Sobic006G201100--Sobic006G214700 Sobic002G046900 Sobic002G046900 Sobic006G201100--Sobic002G046900 Sobic006G201100--Sobic010G207500 Sobic006G201100--Sobic004G300000 Sobic006G201100--Sobic006G110900 Sobic006G201100--Sobic003G306700 Sobic006G201100--Sobic004G164200 Sobic006G201100--Sobic009G141400 Sobic010G207500--Sobic002G025700 Sobic010G207500--Sobic006G201100 Sobic010G207500--Sobic004G300000 Sobic002G362100 Sobic002G362100 Sobic010G207500--Sobic002G362100 Sobic010G207500--Sobic002G046900 Sobic010G207500--Sobic010G035500 Sobic010G207500--Sobic004G164200 Sobic010G207500--Sobic009G141400 Sobic001G351400 Sobic001G351400 Sobic010G207500--Sobic001G351400 Sobic001G450600--Sobic006G214700 Sobic001G450600--Sobic004G333400 Sobic001G450600--Sobic008G063200 Sobic010G183400 Sobic010G183400 Sobic001G450600--Sobic010G183400 Sobic003G084500 Sobic003G084500 Sobic001G450600--Sobic003G084500 Sobic001G450600--Sobic002G331800 Sobic003G286300 Sobic003G286300 Sobic001G450600--Sobic003G286300 Sobic003G334100 Sobic003G334100 Sobic001G450600--Sobic003G334100 Sobic010G189200 Sobic010G189200 Sobic001G450600--Sobic010G189200
Octagon: transcription factors


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