Gene annotation
Transcriptome id Sobic.010G231100.2
Synonym GLUR3, Sb10g027370, ATGLR3.4, GLR3.4
Functional annotation glutamate receptor, putative, expressed
UniProt A0A194YL07
Pfam PF13458 PF00497 PF00060
Panther DB PTHR18966 PTHR18966:SF250
NCBI CDD KOG1052; Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits
KEGG Orthology K05387; glutamate receptor, ionotropic, plant
Gene Ontology GO:0016020; membrane GO:0004970ionotropic glutamate receptor activity


Orthologs (automatic annotation)
TAIR AT1G05200 : glutamate receptor 3.4
RAP-DB (Rice) LOC_Os06g46670.2 : glutamate receptor, putative, expressed
MaizeGDB (Corn) Zm00025a018130 , Zm00025a018125 , Zm00025a018121
Brachypodium KQK17166 , KQK17165 , PNT75451 , PNT75450 , PNT75452
Barley HORVU7Hr1G104490.4 , HORVU1Hr1G086120.10 , HORVU1Hr1G086120.11 , HORVU1Hr1G086120.12 , HORVU1Hr1G086120.13 , HORVU1Hr1G086120.14 , HORVU1Hr1G086120.15 , HORVU1Hr1G086120.16 , HORVU1Hr1G086120.17 , HORVU1Hr1G086120.18 , HORVU1Hr1G086120.19 , HORVU7Hr1G104490.5 , HORVU7Hr1G104490.7 , HORVU7Hr1G104490.6 , HORVU7Hr1G104490.3 , HORVU7Hr1G104490.2 , HORVU7Hr1G104490.8 , HORVU1Hr1G086120.2 , HORVU1Hr1G086120.3 , HORVU1Hr1G086120.1 , HORVU1Hr1G086120.6 , HORVU1Hr1G086120.7 , HORVU1Hr1G086120.4 , HORVU1Hr1G086120.5 , HORVU1Hr1G086120.8 , HORVU1Hr1G086120.9 , HORVU1Hr1G086120.25 , HORVU1Hr1G086120.24 , HORVU1Hr1G086120.21 , HORVU1Hr1G086120.20 , HORVU1Hr1G086120.23 , HORVU1Hr1G086120.22
Wheat TraesCS7B02G355500 , TraesCS1A02G390300 , TraesCS1A02G390300 , TraesCS7A02G455200 , TraesCS7D02G444100 , TraesCS7D02G444100 , TraesCS1B02G418500 , TraesCS1B02G418500 , TraesCS1D02G398500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
2 Sobic.001G207200 MEE12, putative, expressed -
3 Sobic.006G214700 APO, putative, expressed -
4 Sobic.005G028900 cytochrome c-type biogenesis protein dbsD-like, putative, expressed -
5 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
6 Sobic.009G079950 - -
7 Sobic.009G141400 transcriptional regulator, putative, expressed -
8 Sobic.006G024500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
9 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
10 Sobic.009G052700 4Fe-4S binding domain containing protein, expressed -
11 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
12 Sobic.004G248400 APO, putative, expressed -
13 Sobic.002G163700 expressed protein -
14 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
15 Sobic.006G201100 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
16 Sobic.004G144000 - -
17 Sobic.010G030300 serine threonine kinase, putative, expressed -
18 Sobic.010G183400 down-regulated TF in developmental senescence(PubMedID : 27586543)@homeobox domain containing protein, expressed -
19 Sobic.010G189200 pentatricopeptide, putative, expressed -
20 Sobic.003G174100 phosphoesterase family protein, putative, expressed -


Gene co-expression network
sample Sobic010G231100 Sobic010G231100 Sobic003G179400 Sobic003G179400 Sobic010G231100--Sobic003G179400 Sobic001G207200 Sobic001G207200 Sobic010G231100--Sobic001G207200 Sobic006G214700 Sobic006G214700 Sobic010G231100--Sobic006G214700 Sobic005G028900 Sobic005G028900 Sobic010G231100--Sobic005G028900 Sobic009G036300 Sobic009G036300 Sobic010G231100--Sobic009G036300 Sobic009G079950 Sobic009G079950 Sobic010G231100--Sobic009G079950 Sobic009G141400 Sobic009G141400 Sobic010G231100--Sobic009G141400 Sobic006G024500 Sobic006G024500 Sobic010G231100--Sobic006G024500 Sobic001G450600 Sobic001G450600 Sobic010G231100--Sobic001G450600 Sobic003G179400--Sobic006G214700 Sobic003G179400--Sobic010G231100 Sobic003G179400--Sobic005G028900 Sobic010G076800 Sobic010G076800 Sobic003G179400--Sobic010G076800 Sobic004G333400 Sobic004G333400 Sobic003G179400--Sobic004G333400 Sobic003G179400--Sobic001G450600 Sobic008G063200 Sobic008G063200 Sobic003G179400--Sobic008G063200 Sobic002G331800 Sobic002G331800 Sobic003G179400--Sobic002G331800 Sobic006G110900 Sobic006G110900 Sobic003G179400--Sobic006G110900 Sobic010G211500 Sobic010G211500 Sobic001G207200--Sobic010G211500 Sobic001G207200--Sobic010G231100 Sobic001G501300 Sobic001G501300 Sobic001G207200--Sobic001G501300 Sobic001G207200--Sobic009G036300 Sobic008G165900 Sobic008G165900 Sobic001G207200--Sobic008G165900 Sobic009G052700 Sobic009G052700 Sobic001G207200--Sobic009G052700 Sobic001G207200--Sobic009G079950 Sobic003G332900 Sobic003G332900 Sobic001G207200--Sobic003G332900 Sobic001G224200 Sobic001G224200 Sobic001G207200--Sobic001G224200 Sobic006G214700--Sobic003G179400 Sobic006G214700--Sobic001G450600 Sobic006G214700--Sobic002G331800 Sobic006G214700--Sobic005G028900 Sobic006G214700--Sobic006G110900 Sobic006G214700--Sobic004G333400 Sobic003G253300 Sobic003G253300 Sobic006G214700--Sobic003G253300 Sobic006G214700--Sobic008G063200 Sobic006G214700--Sobic010G076800 Sobic005G028900--Sobic006G214700 Sobic004G144000 Sobic004G144000 Sobic005G028900--Sobic004G144000 Sobic010G183400 Sobic010G183400 Sobic005G028900--Sobic010G183400 Sobic004G250200 Sobic004G250200 Sobic005G028900--Sobic004G250200 Sobic003G439600 Sobic003G439600 Sobic005G028900--Sobic003G439600 Sobic003G245800 Sobic003G245800 Sobic005G028900--Sobic003G245800 Sobic005G028900--Sobic003G179400 Sobic007G227600 Sobic007G227600 Sobic005G028900--Sobic007G227600 Sobic005G028900--Sobic004G333400 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic010G074200 Sobic010G074200 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic010G074100 Sobic010G074100 Sobic009G036300--Sobic010G074100 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic009G079950--Sobic009G141400 Sobic003G306700 Sobic003G306700 Sobic009G079950--Sobic003G306700 Sobic009G079950--Sobic006G214700 Sobic009G079950--Sobic010G231100 Sobic004G300000 Sobic004G300000 Sobic009G079950--Sobic004G300000 Sobic009G079950--Sobic001G207200 Sobic006G201100 Sobic006G201100 Sobic009G079950--Sobic006G201100 Sobic010G207500 Sobic010G207500 Sobic009G079950--Sobic010G207500 Sobic009G079950--Sobic001G450600 Sobic009G141400--Sobic006G214700 Sobic009G141400--Sobic006G110900 Sobic006G155500 Sobic006G155500 Sobic009G141400--Sobic006G155500 Sobic010G035500 Sobic010G035500 Sobic009G141400--Sobic010G035500 Sobic010G269400 Sobic010G269400 Sobic009G141400--Sobic010G269400 Sobic004G324100 Sobic004G324100 Sobic009G141400--Sobic004G324100 Sobic009G141400--Sobic008G063200 Sobic009G141400--Sobic003G253300 Sobic001G286600 Sobic001G286600 Sobic009G141400--Sobic001G286600 Sobic006G024500--Sobic005G028900 Sobic004G142800 Sobic004G142800 Sobic006G024500--Sobic004G142800 Sobic006G024500--Sobic009G036300 Sobic003G125400 Sobic003G125400 Sobic006G024500--Sobic003G125400 Sobic006G024500--Sobic010G231100 Sobic006G024500--Sobic001G450600 Sobic009G213800 Sobic009G213800 Sobic006G024500--Sobic009G213800 Sobic006G024500--Sobic007G227600 Sobic003G103200 Sobic003G103200 Sobic006G024500--Sobic003G103200 Sobic001G450600--Sobic006G214700 Sobic001G450600--Sobic004G333400 Sobic001G450600--Sobic008G063200 Sobic001G450600--Sobic010G183400 Sobic003G084500 Sobic003G084500 Sobic001G450600--Sobic003G084500 Sobic001G450600--Sobic002G331800 Sobic003G286300 Sobic003G286300 Sobic001G450600--Sobic003G286300 Sobic003G334100 Sobic003G334100 Sobic001G450600--Sobic003G334100 Sobic010G189200 Sobic010G189200 Sobic001G450600--Sobic010G189200
Octagon: transcription factors


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