Gene annotation
Transcriptome id Sobic.001G207200.2,Sobic.001G207200.3
Synonym MEE12
Functional annotation MEE12, putative, expressed
UniProt A0A1Z5S6K9
Pfam -
Panther DB PTHR31576 PTHR31576:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G02955 : maternal effect embryo arrest 12
RAP-DB (Rice) LOC_Os05g28460.1 : MEE12, putative, expressed
MaizeGDB (Corn) Zm00025a043259
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G211500 DNA-directed RNA polymerase 3A, chloroplast precursor, putative, expressed K10908: POLRMT, DNA-directed RNA polymerase, mitochondrial
2 Sobic.010G231100 glutamate receptor, putative, expressed K05387: glutamate receptor, ionotropic, plant
3 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
4 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
5 Sobic.008G165900 similar to DEAD-box ATP-dependent RNA helicase 9(PubMedID : 29862293)@- -
6 Sobic.009G052700 4Fe-4S binding domain containing protein, expressed -
7 Sobic.009G079950 - -
8 Sobic.003G332900 expressed protein K14404: CPSF4, cleavage and polyadenylation specificity factor subunit 4
9 Sobic.001G224200 nucleolin, putative, expressed K11294: NCL, nucleolin
10 Sobic.004G262700 - -
11 Sobic.003G297800 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
12 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
13 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
14 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
15 Sobic.002G404200 F-box domain containing protein, expressed -
16 Sobic.001G450600 uncharacterized protein sll0194, putative, expressed K03118: sec-independent protein translocase protein TatC
17 Sobic.003G084500 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
18 Sobic.009G193500 AGAP007115-PA, putative, expressed -
19 Sobic.003G179400 NLI interacting factor(NIF) family protein(PubMedID : 26320239)@NLI interacting factor-like phosphatase, putative, expressed K15731: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase
20 Sobic.002G031700 - -


Gene co-expression network
sample Sobic001G207200 Sobic001G207200 Sobic010G211500 Sobic010G211500 Sobic001G207200--Sobic010G211500 Sobic010G231100 Sobic010G231100 Sobic001G207200--Sobic010G231100 Sobic001G501300 Sobic001G501300 Sobic001G207200--Sobic001G501300 Sobic009G036300 Sobic009G036300 Sobic001G207200--Sobic009G036300 Sobic008G165900 Sobic008G165900 Sobic001G207200--Sobic008G165900 Sobic009G052700 Sobic009G052700 Sobic001G207200--Sobic009G052700 Sobic009G079950 Sobic009G079950 Sobic001G207200--Sobic009G079950 Sobic003G332900 Sobic003G332900 Sobic001G207200--Sobic003G332900 Sobic001G224200 Sobic001G224200 Sobic001G207200--Sobic001G224200 Sobic007G227600 Sobic007G227600 Sobic010G211500--Sobic007G227600 Sobic010G211500--Sobic009G036300 Sobic010G211500--Sobic001G207200 Sobic010G211500--Sobic009G052700 Sobic003G084500 Sobic003G084500 Sobic010G211500--Sobic003G084500 Sobic001G450600 Sobic001G450600 Sobic010G211500--Sobic001G450600 Sobic003G334100 Sobic003G334100 Sobic010G211500--Sobic003G334100 Sobic010G183400 Sobic010G183400 Sobic010G211500--Sobic010G183400 Sobic010G074100 Sobic010G074100 Sobic010G211500--Sobic010G074100 Sobic003G179400 Sobic003G179400 Sobic010G231100--Sobic003G179400 Sobic010G231100--Sobic001G207200 Sobic006G214700 Sobic006G214700 Sobic010G231100--Sobic006G214700 Sobic005G028900 Sobic005G028900 Sobic010G231100--Sobic005G028900 Sobic010G231100--Sobic009G036300 Sobic010G231100--Sobic009G079950 Sobic009G141400 Sobic009G141400 Sobic010G231100--Sobic009G141400 Sobic006G024500 Sobic006G024500 Sobic010G231100--Sobic006G024500 Sobic010G231100--Sobic001G450600 Sobic010G100800 Sobic010G100800 Sobic001G501300--Sobic010G100800 Sobic001G501300--Sobic001G207200 Sobic004G262700 Sobic004G262700 Sobic001G501300--Sobic004G262700 Sobic010G176300 Sobic010G176300 Sobic001G501300--Sobic010G176300 Sobic001G501300--Sobic008G165900 Sobic002G167500 Sobic002G167500 Sobic001G501300--Sobic002G167500 Sobic005G026000 Sobic005G026000 Sobic001G501300--Sobic005G026000 Sobic003G193200 Sobic003G193200 Sobic001G501300--Sobic003G193200 Sobic002G031700 Sobic002G031700 Sobic001G501300--Sobic002G031700 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic010G074200 Sobic010G074200 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic009G036300--Sobic010G074100 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic008G165900--Sobic001G224200 Sobic008G165900--Sobic003G332900 Sobic002G238000 Sobic002G238000 Sobic008G165900--Sobic002G238000 Sobic006G128400 Sobic006G128400 Sobic008G165900--Sobic006G128400 Sobic007G075800 Sobic007G075800 Sobic008G165900--Sobic007G075800 Sobic008G165900--Sobic001G207200 Sobic008G165900--Sobic010G100800 Sobic008G165900--Sobic001G501300 Sobic008G165900--Sobic002G031700 Sobic009G052700--Sobic003G334100 Sobic009G052700--Sobic006G214700 Sobic004G248400 Sobic004G248400 Sobic009G052700--Sobic004G248400 Sobic009G052700--Sobic010G211500 Sobic009G052700--Sobic005G028900 Sobic009G052700--Sobic003G179400 Sobic005G138600 Sobic005G138600 Sobic009G052700--Sobic005G138600 Sobic009G014100 Sobic009G014100 Sobic009G052700--Sobic009G014100 Sobic004G333400 Sobic004G333400 Sobic009G052700--Sobic004G333400 Sobic009G079950--Sobic009G141400 Sobic003G306700 Sobic003G306700 Sobic009G079950--Sobic003G306700 Sobic009G079950--Sobic006G214700 Sobic009G079950--Sobic010G231100 Sobic004G300000 Sobic004G300000 Sobic009G079950--Sobic004G300000 Sobic009G079950--Sobic001G207200 Sobic006G201100 Sobic006G201100 Sobic009G079950--Sobic006G201100 Sobic010G207500 Sobic010G207500 Sobic009G079950--Sobic010G207500 Sobic009G079950--Sobic001G450600 Sobic003G332900--Sobic008G165900 Sobic003G332900--Sobic010G211500 Sobic004G231600 Sobic004G231600 Sobic003G332900--Sobic004G231600 Sobic003G332900--Sobic001G207200 Sobic008G022701 Sobic008G022701 Sobic003G332900--Sobic008G022701 Sobic002G131000 Sobic002G131000 Sobic003G332900--Sobic002G131000 Sobic003G332900--Sobic001G224200 Sobic009G238100 Sobic009G238100 Sobic003G332900--Sobic009G238100 Sobic003G332900--Sobic006G128400 Sobic001G224200--Sobic008G165900 Sobic001G224200--Sobic006G128400 Sobic001G224200--Sobic001G207200 Sobic001G224200--Sobic007G075800 Sobic001G224200--Sobic002G238000 Sobic001G119600 Sobic001G119600 Sobic001G224200--Sobic001G119600 Sobic001G224200--Sobic003G332900 Sobic001G501400 Sobic001G501400 Sobic001G224200--Sobic001G501400 Sobic004G030800 Sobic004G030800 Sobic001G224200--Sobic004G030800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.