Gene annotation
Transcriptome id Sobic.004G262700.1
Synonym Sb04g030100, DegP7
Functional annotation -
UniProt A0A194YRS5
Pfam PF13180 PF13365 PF12812
Panther DB PTHR22939 PTHR22939:SF66
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G03380 : DegP protease 7
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a021777
Brachypodium KQK00996 , KQK00995 , KQK00938
Barley HORVU6Hr1G069920.10 , HORVU6Hr1G069920.11 , HORVU6Hr1G069920.2 , HORVU6Hr1G069920.3 , HORVU6Hr1G069920.1 , HORVU6Hr1G069920.6 , HORVU6Hr1G069920.7 , HORVU6Hr1G069920.4 , HORVU6Hr1G069920.5 , HORVU6Hr1G069920.8 , HORVU6Hr1G069920.9
Wheat TraesCS6B02G305400 , TraesCS6B02G305400 , TraesCS6B02G305400 , TraesCS6A02G277400 , TraesCS6A02G277400 , TraesCS6A02G277400 , TraesCS6B02G170600 , TraesCS6B02G170600 , TraesCS6D02G258000 , TraesCS6D02G258000 , TraesCS6D02G258000 , TraesCS6D02G258000
Populus -


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cDNA sequences
Sobic.004G262700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G339300 myosin-Vb, putative, expressed K10357: myosin V
2 Sobic.001G396000 OsPOP7 - Putative Prolyl Oligopeptidase homologue, expressed -
3 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
4 Sobic.005G026000 expressed protein -
5 Sobic.004G026500 expressed protein -
6 Sobic.009G193500 AGAP007115-PA, putative, expressed -
7 Sobic.001G124100 phosphatidylinositol-4-phosphate 5-kinase, putative, expressed K00889: 1-phosphatidylinositol-4-phosphate 5-kinase
8 Sobic.008G172300 peroxisome assembly protein, putative, expressed K06664: PEX2, peroxin-2
9 Sobic.002G345700 insulin-degrading enzyme, putative, expressed K01408: IDE, insulysin
10 Sobic.001G300100 - -
11 Sobic.001G529600 1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
12 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
13 Sobic.002G167500 expressed protein -
14 Sobic.003G311900 CK1_CaseinKinase_1a.3 - CK1 includes the casein kinase 1 kinases, expressed -
15 Sobic.010G079500 PHD-finger domain containing protein, putative, expressed -
16 Sobic.005G142800 exportin 1, putative, expressed K15436: TRPO3, transportin-3
17 Sobic.002G316600 expressed protein -
18 Sobic.002G428800 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
19 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
20 Sobic.003G193200 expressed protein -


Gene co-expression network
sample Sobic004G262700 Sobic004G262700 Sobic002G339300 Sobic002G339300 Sobic004G262700--Sobic002G339300 Sobic001G396000 Sobic001G396000 Sobic004G262700--Sobic001G396000 Sobic001G501300 Sobic001G501300 Sobic004G262700--Sobic001G501300 Sobic005G026000 Sobic005G026000 Sobic004G262700--Sobic005G026000 Sobic004G026500 Sobic004G026500 Sobic004G262700--Sobic004G026500 Sobic009G193500 Sobic009G193500 Sobic004G262700--Sobic009G193500 Sobic001G124100 Sobic001G124100 Sobic004G262700--Sobic001G124100 Sobic008G172300 Sobic008G172300 Sobic004G262700--Sobic008G172300 Sobic002G345700 Sobic002G345700 Sobic004G262700--Sobic002G345700 Sobic002G339300--Sobic004G262700 Sobic002G339300--Sobic004G026500 Sobic002G339300--Sobic009G193500 Sobic002G339300--Sobic001G124100 Sobic002G339300--Sobic001G396000 Sobic003G193200 Sobic003G193200 Sobic002G339300--Sobic003G193200 Sobic003G190000 Sobic003G190000 Sobic002G339300--Sobic003G190000 Sobic002G168500 Sobic002G168500 Sobic002G339300--Sobic002G168500 Sobic010G197000 Sobic010G197000 Sobic002G339300--Sobic010G197000 Sobic001G396000--Sobic001G124100 Sobic001G396000--Sobic004G262700 Sobic001G396000--Sobic002G345700 Sobic001G396000--Sobic002G339300 Sobic010G013200 Sobic010G013200 Sobic001G396000--Sobic010G013200 Sobic002G146300 Sobic002G146300 Sobic001G396000--Sobic002G146300 Sobic007G103100 Sobic007G103100 Sobic001G396000--Sobic007G103100 Sobic001G219700 Sobic001G219700 Sobic001G396000--Sobic001G219700 Sobic002G193100 Sobic002G193100 Sobic001G396000--Sobic002G193100 Sobic010G100800 Sobic010G100800 Sobic001G501300--Sobic010G100800 Sobic001G207200 Sobic001G207200 Sobic001G501300--Sobic001G207200 Sobic001G501300--Sobic004G262700 Sobic010G176300 Sobic010G176300 Sobic001G501300--Sobic010G176300 Sobic008G165900 Sobic008G165900 Sobic001G501300--Sobic008G165900 Sobic002G167500 Sobic002G167500 Sobic001G501300--Sobic002G167500 Sobic001G501300--Sobic005G026000 Sobic001G501300--Sobic003G193200 Sobic002G031700 Sobic002G031700 Sobic001G501300--Sobic002G031700 Sobic005G026000--Sobic010G100800 Sobic003G311900 Sobic003G311900 Sobic005G026000--Sobic003G311900 Sobic005G026000--Sobic004G262700 Sobic005G026000--Sobic002G167500 Sobic004G344000 Sobic004G344000 Sobic005G026000--Sobic004G344000 Sobic005G026000--Sobic001G124100 Sobic003G264800 Sobic003G264800 Sobic005G026000--Sobic003G264800 Sobic001G049500 Sobic001G049500 Sobic005G026000--Sobic001G049500 Sobic003G107500 Sobic003G107500 Sobic005G026000--Sobic003G107500 Sobic004G026500--Sobic008G172300 Sobic004G026500--Sobic001G124100 Sobic004G026500--Sobic009G193500 Sobic004G026500--Sobic001G219700 Sobic001G072700 Sobic001G072700 Sobic004G026500--Sobic001G072700 Sobic004G026500--Sobic002G339300 Sobic003G203300 Sobic003G203300 Sobic004G026500--Sobic003G203300 Sobic007G227700 Sobic007G227700 Sobic004G026500--Sobic007G227700 Sobic002G276100 Sobic002G276100 Sobic004G026500--Sobic002G276100 Sobic009G193500--Sobic004G026500 Sobic009G193500--Sobic002G339300 Sobic009G193500--Sobic002G276100 Sobic009G193500--Sobic001G124100 Sobic009G193500--Sobic007G103100 Sobic009G193500--Sobic002G168500 Sobic009G193500--Sobic008G172300 Sobic009G193500--Sobic001G219700 Sobic006G186600 Sobic006G186600 Sobic009G193500--Sobic006G186600 Sobic001G124100--Sobic004G026500 Sobic001G124100--Sobic001G219700 Sobic005G142800 Sobic005G142800 Sobic001G124100--Sobic005G142800 Sobic001G124100--Sobic008G172300 Sobic001G124100--Sobic001G396000 Sobic001G124100--Sobic002G339300 Sobic001G124100--Sobic002G168500 Sobic006G233700 Sobic006G233700 Sobic001G124100--Sobic006G233700 Sobic006G219600 Sobic006G219600 Sobic001G124100--Sobic006G219600 Sobic008G172300--Sobic004G026500 Sobic009G014100 Sobic009G014100 Sobic008G172300--Sobic009G014100 Sobic003G340600 Sobic003G340600 Sobic008G172300--Sobic003G340600 Sobic008G172300--Sobic002G345700 Sobic008G172300--Sobic001G124100 Sobic008G172300--Sobic010G197000 Sobic008G172300--Sobic005G142800 Sobic002G168300 Sobic002G168300 Sobic008G172300--Sobic002G168300 Sobic008G172300--Sobic002G167500 Sobic002G345700--Sobic008G172300 Sobic005G075100 Sobic005G075100 Sobic002G345700--Sobic005G075100 Sobic002G345700--Sobic005G142800 Sobic002G345700--Sobic001G396000 Sobic002G198200 Sobic002G198200 Sobic002G345700--Sobic002G198200 Sobic002G345700--Sobic004G026500 Sobic002G345700--Sobic001G124100 Sobic004G181600 Sobic004G181600 Sobic002G345700--Sobic004G181600 Sobic007G111400 Sobic007G111400 Sobic002G345700--Sobic007G111400
Octagon: transcription factors


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