Gene annotation
Transcriptome id Sobic.002G428800.2,Sobic.002G428800.1
Synonym UBA2, Sb02g043880, ATUBA2
Functional annotation ubiquitin-activating enzyme, putative, expressed
UniProt A0A1B6QGI8 , C5X6C6
Pfam PF09358 PF16191 PF16190 PF10585 PF00899
Panther DB PTHR10953 PTHR10953:SF154 PTHR10953 PTHR10953:SF164
NCBI CDD -
KEGG Orthology K03178; UBE1, ubiquitin-activating enzyme E1
Gene Ontology GO:0008641; ubiquitin-like modifier activating enzyme activity


Orthologs (automatic annotation)
TAIR AT5G06460 : ubiquitin activating enzyme 2
RAP-DB (Rice) LOC_Os07g49230.1,LOC_Os07g49230.2 : ubiquitin-activating enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a049262 , Zm00025a053662 , Zm00025a013214 , Zm00025a002020
Brachypodium PNT77575 , KQK14498 , KQK14497
Barley HORVU2Hr1G014440.8 , HORVU2Hr1G014440.1 , HORVU2Hr1G014440.3 , HORVU2Hr1G014440.2 , HORVU2Hr1G014440.5 , HORVU2Hr1G014440.4 , HORVU2Hr1G014440.7 , HORVU2Hr1G014440.6 , HORVU4Hr1G055880.1 , HORVU4Hr1G055880.2 , HORVU4Hr1G055880.3 , HORVU4Hr1G055880.4 , HORVU4Hr1G055880.5 , HORVU4Hr1G055880.6 , HORVU4Hr1G055880.7 , HORVU4Hr1G055880.8
Wheat TraesCS2A02G088900 , TraesCS2A02G088900 , TraesCS2A02G088900 , TraesCS2D02G086700 , TraesCS2D02G086700 , TraesCS4A02G111700 , TraesCS4A02G111700 , TraesCS2B02G104300 , TraesCS4B02G192100 , TraesCS4B02G192100 , TraesCS4D02G193400 , TraesCS4D02G193400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
2 Sobic.004G262700 - -
3 Sobic.007G200900 pyridoxamine 5\'-phosphate oxidase family protein, putative, expressed -
4 Sobic.001G501300 cell division control protein 48 homolog E, putative, expressed K13525: VCP, transitional endoplasmic reticulum ATPase
5 Sobic.003G134000 PPR repeat domain containing protein, putative, expressed -
6 Sobic.003G378400 DUF803 domain containing, putative, expressed -
7 Sobic.010G176300 histone deacetylase 19, putative, expressed K06067: histone deacetylase 1/2
8 Sobic.004G290000 OsSub19 - Putative Subtilisin homologue, expressed K01280: tripeptidyl-peptidase II
9 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
10 Sobic.004G190700 zinc finger, C3HC4 type, putative, expressed -
11 Sobic.003G297800 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
12 Sobic.006G039400 cation efflux family protein, putative, expressed K14696: SLC30A9, solute carrier family 30 (zinc transporter), member 9
13 Sobic.001G120500 toc64, putative, expressed -
14 Sobic.005G026000 expressed protein -
15 Sobic.009G094700 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
16 Sobic.010G013300 expressed protein -
17 Sobic.009G005400 ABC transporter, ATP-binding protein, putative, expressed -
18 Sobic.001G449900 conserved oligomeric complex COG6 family protein, expressed -
19 Sobic.002G291400 nicotinate-nucleotide pyrophosphorylase, putative, expressed K00767: nadC, nicotinate-nucleotide pyrophosphorylase (carboxylating)
20 Sobic.006G238700 C2 domain containing protein, expressed -


Gene co-expression network
sample Sobic002G428800 Sobic002G428800 Sobic005G140500 Sobic005G140500 Sobic002G428800--Sobic005G140500 Sobic004G262700 Sobic004G262700 Sobic002G428800--Sobic004G262700 Sobic007G200900 Sobic007G200900 Sobic002G428800--Sobic007G200900 Sobic001G501300 Sobic001G501300 Sobic002G428800--Sobic001G501300 Sobic003G134000 Sobic003G134000 Sobic002G428800--Sobic003G134000 Sobic003G378400 Sobic003G378400 Sobic002G428800--Sobic003G378400 Sobic010G176300 Sobic010G176300 Sobic002G428800--Sobic010G176300 Sobic004G290000 Sobic004G290000 Sobic002G428800--Sobic004G290000 Sobic010G100800 Sobic010G100800 Sobic002G428800--Sobic010G100800 Sobic005G140500--Sobic004G262700 Sobic005G140500--Sobic010G100800 Sobic005G140500--Sobic002G428800 Sobic010G013300 Sobic010G013300 Sobic005G140500--Sobic010G013300 Sobic006G238700 Sobic006G238700 Sobic005G140500--Sobic006G238700 Sobic003G194100 Sobic003G194100 Sobic005G140500--Sobic003G194100 Sobic006G280000 Sobic006G280000 Sobic005G140500--Sobic006G280000 Sobic001G396000 Sobic001G396000 Sobic005G140500--Sobic001G396000 Sobic007G029500 Sobic007G029500 Sobic005G140500--Sobic007G029500 Sobic002G339300 Sobic002G339300 Sobic004G262700--Sobic002G339300 Sobic004G262700--Sobic001G396000 Sobic004G262700--Sobic001G501300 Sobic005G026000 Sobic005G026000 Sobic004G262700--Sobic005G026000 Sobic004G026500 Sobic004G026500 Sobic004G262700--Sobic004G026500 Sobic009G193500 Sobic009G193500 Sobic004G262700--Sobic009G193500 Sobic001G124100 Sobic001G124100 Sobic004G262700--Sobic001G124100 Sobic008G172300 Sobic008G172300 Sobic004G262700--Sobic008G172300 Sobic002G345700 Sobic002G345700 Sobic004G262700--Sobic002G345700 Sobic006G196300 Sobic006G196300 Sobic007G200900--Sobic006G196300 Sobic007G200900--Sobic002G428800 Sobic009G149500 Sobic009G149500 Sobic007G200900--Sobic009G149500 Sobic001G473800 Sobic001G473800 Sobic007G200900--Sobic001G473800 Sobic010G223300 Sobic010G223300 Sobic007G200900--Sobic010G223300 Sobic001G434200 Sobic001G434200 Sobic007G200900--Sobic001G434200 Sobic003G444600 Sobic003G444600 Sobic007G200900--Sobic003G444600 Sobic007G112600 Sobic007G112600 Sobic007G200900--Sobic007G112600 Sobic001G449900 Sobic001G449900 Sobic007G200900--Sobic001G449900 Sobic001G501300--Sobic010G100800 Sobic001G207200 Sobic001G207200 Sobic001G501300--Sobic001G207200 Sobic001G501300--Sobic004G262700 Sobic001G501300--Sobic010G176300 Sobic008G165900 Sobic008G165900 Sobic001G501300--Sobic008G165900 Sobic002G167500 Sobic002G167500 Sobic001G501300--Sobic002G167500 Sobic001G501300--Sobic005G026000 Sobic003G193200 Sobic003G193200 Sobic001G501300--Sobic003G193200 Sobic002G031700 Sobic002G031700 Sobic001G501300--Sobic002G031700 Sobic003G134000--Sobic002G031700 Sobic002G155000 Sobic002G155000 Sobic003G134000--Sobic002G155000 Sobic006G058800 Sobic006G058800 Sobic003G134000--Sobic006G058800 Sobic007G075800 Sobic007G075800 Sobic003G134000--Sobic007G075800 Sobic003G134000--Sobic002G428800 Sobic003G134000--Sobic010G100800 Sobic002G364900 Sobic002G364900 Sobic003G134000--Sobic002G364900 Sobic003G134000--Sobic008G165900 Sobic002G092050 Sobic002G092050 Sobic003G134000--Sobic002G092050 Sobic001G462200 Sobic001G462200 Sobic003G378400--Sobic001G462200 Sobic001G486700 Sobic001G486700 Sobic003G378400--Sobic001G486700 Sobic003G378400--Sobic002G428800 Sobic001G279900 Sobic001G279900 Sobic003G378400--Sobic001G279900 Sobic008G118900 Sobic008G118900 Sobic003G378400--Sobic008G118900 Sobic003G378400--Sobic004G290000 Sobic008G135200 Sobic008G135200 Sobic003G378400--Sobic008G135200 Sobic003G378400--Sobic006G238700 Sobic008G103800 Sobic008G103800 Sobic003G378400--Sobic008G103800 Sobic010G176300--Sobic001G501300 Sobic003G212100 Sobic003G212100 Sobic010G176300--Sobic003G212100 Sobic001G276200 Sobic001G276200 Sobic010G176300--Sobic001G276200 Sobic010G176300--Sobic002G428800 Sobic010G176300--Sobic003G134000 Sobic006G089400 Sobic006G089400 Sobic010G176300--Sobic006G089400 Sobic001G070700 Sobic001G070700 Sobic010G176300--Sobic001G070700 Sobic004G318000 Sobic004G318000 Sobic010G176300--Sobic004G318000 Sobic010G176300--Sobic010G100800 Sobic006G219300 Sobic006G219300 Sobic004G290000--Sobic006G219300 Sobic008G004300 Sobic008G004300 Sobic004G290000--Sobic008G004300 Sobic004G253100 Sobic004G253100 Sobic004G290000--Sobic004G253100 Sobic004G023100 Sobic004G023100 Sobic004G290000--Sobic004G023100 Sobic002G166300 Sobic002G166300 Sobic004G290000--Sobic002G166300 Sobic001G004400 Sobic001G004400 Sobic004G290000--Sobic001G004400 Sobic005G096400 Sobic005G096400 Sobic004G290000--Sobic005G096400 Sobic009G139900 Sobic009G139900 Sobic004G290000--Sobic009G139900 Sobic004G290000--Sobic002G428800 Sobic010G100800--Sobic001G501300 Sobic001G261900 Sobic001G261900 Sobic010G100800--Sobic001G261900 Sobic010G100800--Sobic005G026000 Sobic001G300100 Sobic001G300100 Sobic010G100800--Sobic001G300100 Sobic002G404200 Sobic002G404200 Sobic010G100800--Sobic002G404200 Sobic010G086900 Sobic010G086900 Sobic010G100800--Sobic010G086900 Sobic010G100800--Sobic002G031700 Sobic001G275300 Sobic001G275300 Sobic010G100800--Sobic001G275300 Sobic010G100800--Sobic003G193200
Octagon: transcription factors


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