Gene annotation
Transcriptome id Sobic.006G238700.1
Synonym SYTE, NTMC2T2.1, SYT5, NTMC2TYPE2.1, Sb06g030540, ATSYTE
Functional annotation C2 domain containing protein, expressed
UniProt C5Y914
Pfam PF17047 PF00168
Panther DB PTHR10774 PTHR10774:SF73
NCBI CDD KOG1328; Synaptic vesicle protein BAIAP3, involved in vesicle priming/regulation
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G05500 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os04g55220.1 : C2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a009562
Brachypodium KQJ84947 , KQJ84948
Barley HORVU2Hr1G114590.12 , HORVU2Hr1G114590.13 , HORVU2Hr1G114590.10 , HORVU2Hr1G114590.11 , HORVU2Hr1G114590.1 , HORVU2Hr1G114590.2 , HORVU2Hr1G114590.3 , HORVU2Hr1G114590.4 , HORVU2Hr1G114590.5 , HORVU2Hr1G114590.6 , HORVU2Hr1G114590.7 , HORVU2Hr1G114590.8 , HORVU2Hr1G114590.9
Wheat TraesCS2D02G518800 , TraesCS2A02G517200 , TraesCS2B02G545700 , TraesCS2B02G545700 , TraesCS2B02G545700 , TraesCS2B02G545700
Populus -


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cDNA sequences
Sobic.006G238700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G140500 peptidase, M24 family protein, putative, expressed K01262: Xaa-Pro aminopeptidase
2 Sobic.001G067300 histidinol dehydrogenase, chloroplast precursor, putative, expressed K00013: histidinol dehydrogenase
3 Sobic.006G280000 transportin-2, putative, expressed K18752: TNPO1, IPO2, transportin-1
4 Sobic.006G073200 OTU-like cysteine protease family protein, putative, expressed K12655: OTUD5, OTU domain-containing protein 5
5 Sobic.001G279900 CDPK - calmodulin-binding receptor-like cytoplasmic kinase 3(PubMedID : 31721651)@wall-associated receptor kinase-like 20 precursor, putative, expressed -
6 Sobic.002G350600 HEAT repeat family protein, putative, expressed -
7 Sobic.009G094700 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
8 Sobic.008G135200 importin subunit beta, putative, expressed K14293: KPNB1, importin subunit beta-1
9 Sobic.001G120500 toc64, putative, expressed -
10 Sobic.004G290000 OsSub19 - Putative Subtilisin homologue, expressed K01280: tripeptidyl-peptidase II
11 Sobic.003G194100 mitochondrial carrier protein, putative, expressed K15084: SLC25A16, GDA, solute carrier family 25 (mitochondrial carrier protein), member 16
12 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
13 Sobic.002G428800 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
14 Sobic.003G378400 DUF803 domain containing, putative, expressed -
15 Sobic.007G029100 ATPase BadF/BadG/BcrA/BcrD type, putative, expressed -
16 Sobic.010G100800 alpha-mannosidase 2, putative, expressed K01231: alpha-mannosidase II
17 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
18 Sobic.002G139100 lipase, putative, expressed -
19 Sobic.008G157200 inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
20 Sobic.003G218300 C-5 cytosine-specific DNA methylase, putative, expressed K15336: TRDMT1, tRNA (cytosine38-C5)-methyltransferase


Gene co-expression network
sample Sobic006G238700 Sobic006G238700 Sobic005G140500 Sobic005G140500 Sobic006G238700--Sobic005G140500 Sobic001G067300 Sobic001G067300 Sobic006G238700--Sobic001G067300 Sobic006G280000 Sobic006G280000 Sobic006G238700--Sobic006G280000 Sobic006G073200 Sobic006G073200 Sobic006G238700--Sobic006G073200 Sobic001G279900 Sobic001G279900 Sobic006G238700--Sobic001G279900 Sobic002G350600 Sobic002G350600 Sobic006G238700--Sobic002G350600 Sobic009G094700 Sobic009G094700 Sobic006G238700--Sobic009G094700 Sobic008G135200 Sobic008G135200 Sobic006G238700--Sobic008G135200 Sobic001G120500 Sobic001G120500 Sobic006G238700--Sobic001G120500 Sobic004G262700 Sobic004G262700 Sobic005G140500--Sobic004G262700 Sobic010G100800 Sobic010G100800 Sobic005G140500--Sobic010G100800 Sobic002G428800 Sobic002G428800 Sobic005G140500--Sobic002G428800 Sobic010G013300 Sobic010G013300 Sobic005G140500--Sobic010G013300 Sobic005G140500--Sobic006G238700 Sobic003G194100 Sobic003G194100 Sobic005G140500--Sobic003G194100 Sobic005G140500--Sobic006G280000 Sobic001G396000 Sobic001G396000 Sobic005G140500--Sobic001G396000 Sobic007G029500 Sobic007G029500 Sobic005G140500--Sobic007G029500 Sobic004G314500 Sobic004G314500 Sobic001G067300--Sobic004G314500 Sobic001G096300 Sobic001G096300 Sobic001G067300--Sobic001G096300 Sobic009G124000 Sobic009G124000 Sobic001G067300--Sobic009G124000 Sobic004G265900 Sobic004G265900 Sobic001G067300--Sobic004G265900 Sobic001G380500 Sobic001G380500 Sobic001G067300--Sobic001G380500 Sobic001G067300--Sobic006G238700 Sobic001G486700 Sobic001G486700 Sobic001G067300--Sobic001G486700 Sobic006G244700 Sobic006G244700 Sobic001G067300--Sobic006G244700 Sobic002G116900 Sobic002G116900 Sobic001G067300--Sobic002G116900 Sobic007G054800 Sobic007G054800 Sobic006G280000--Sobic007G054800 Sobic001G542500 Sobic001G542500 Sobic006G280000--Sobic001G542500 Sobic004G004300 Sobic004G004300 Sobic006G280000--Sobic004G004300 Sobic002G256700 Sobic002G256700 Sobic006G280000--Sobic002G256700 Sobic003G337300 Sobic003G337300 Sobic006G280000--Sobic003G337300 Sobic001G089600 Sobic001G089600 Sobic006G280000--Sobic001G089600 Sobic003G104000 Sobic003G104000 Sobic006G280000--Sobic003G104000 Sobic001G287500 Sobic001G287500 Sobic006G280000--Sobic001G287500 Sobic001G117200 Sobic001G117200 Sobic006G280000--Sobic001G117200 Sobic008G157200 Sobic008G157200 Sobic006G073200--Sobic008G157200 Sobic004G257100 Sobic004G257100 Sobic006G073200--Sobic004G257100 Sobic001G431000 Sobic001G431000 Sobic006G073200--Sobic001G431000 Sobic001G537500 Sobic001G537500 Sobic006G073200--Sobic001G537500 Sobic001G493200 Sobic001G493200 Sobic006G073200--Sobic001G493200 Sobic006G073200--Sobic008G135200 Sobic006G036100 Sobic006G036100 Sobic006G073200--Sobic006G036100 Sobic004G131300 Sobic004G131300 Sobic006G073200--Sobic004G131300 Sobic001G251100 Sobic001G251100 Sobic006G073200--Sobic001G251100 Sobic002G168500 Sobic002G168500 Sobic001G279900--Sobic002G168500 Sobic002G404200 Sobic002G404200 Sobic001G279900--Sobic002G404200 Sobic001G402500 Sobic001G402500 Sobic001G279900--Sobic001G402500 Sobic009G162600 Sobic009G162600 Sobic001G279900--Sobic009G162600 Sobic008G172300 Sobic008G172300 Sobic001G279900--Sobic008G172300 Sobic003G378400 Sobic003G378400 Sobic001G279900--Sobic003G378400 Sobic001G279900--Sobic010G100800 Sobic004G026500 Sobic004G026500 Sobic001G279900--Sobic004G026500 Sobic001G124100 Sobic001G124100 Sobic001G279900--Sobic001G124100 Sobic002G350600--Sobic006G280000 Sobic002G350600--Sobic008G135200 Sobic002G350600--Sobic001G251100 Sobic002G350600--Sobic007G054800 Sobic002G350600--Sobic003G104000 Sobic004G040900 Sobic004G040900 Sobic002G350600--Sobic004G040900 Sobic001G312900 Sobic001G312900 Sobic002G350600--Sobic001G312900 Sobic002G294800 Sobic002G294800 Sobic002G350600--Sobic002G294800 Sobic001G362200 Sobic001G362200 Sobic002G350600--Sobic001G362200 Sobic009G094700--Sobic004G265900 Sobic009G036300 Sobic009G036300 Sobic009G094700--Sobic009G036300 Sobic008G089500 Sobic008G089500 Sobic009G094700--Sobic008G089500 Sobic004G144000 Sobic004G144000 Sobic009G094700--Sobic004G144000 Sobic003G444500 Sobic003G444500 Sobic009G094700--Sobic003G444500 Sobic003G310100 Sobic003G310100 Sobic009G094700--Sobic003G310100 Sobic005G028900 Sobic005G028900 Sobic009G094700--Sobic005G028900 Sobic003G286300 Sobic003G286300 Sobic009G094700--Sobic003G286300 Sobic010G086900 Sobic010G086900 Sobic009G094700--Sobic010G086900 Sobic002G020700 Sobic002G020700 Sobic008G135200--Sobic002G020700 Sobic009G045900 Sobic009G045900 Sobic008G135200--Sobic009G045900 Sobic008G135200--Sobic006G073200 Sobic008G135200--Sobic008G157200 Sobic008G135200--Sobic002G350600 Sobic008G135200--Sobic001G251100 Sobic003G029600 Sobic003G029600 Sobic008G135200--Sobic003G029600 Sobic008G033500 Sobic008G033500 Sobic008G135200--Sobic008G033500 Sobic008G135200--Sobic007G054800 Sobic010G265300 Sobic010G265300 Sobic001G120500--Sobic010G265300 Sobic005G172500 Sobic005G172500 Sobic001G120500--Sobic005G172500 Sobic001G244300 Sobic001G244300 Sobic001G120500--Sobic001G244300 Sobic001G120500--Sobic001G493200 Sobic006G217000 Sobic006G217000 Sobic001G120500--Sobic006G217000 Sobic007G103100 Sobic007G103100 Sobic001G120500--Sobic007G103100 Sobic008G051200 Sobic008G051200 Sobic001G120500--Sobic008G051200 Sobic009G056200 Sobic009G056200 Sobic001G120500--Sobic009G056200 Sobic009G193500 Sobic009G193500 Sobic001G120500--Sobic009G193500
Octagon: transcription factors


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