Gene annotation
Transcriptome id Sobic.002G166300.1
Synonym Sb02g021030, PEX3, PEX3-2
Functional annotation peroxin-3 family protein, putative, expressed
UniProt C5X945
Pfam PF04882
Panther DB PTHR28080 PTHR28080:SF1
NCBI CDD KOG4444; Peroxisomal assembly protein PEX3
KEGG Orthology K13336; peroxin-3
Gene Ontology GO:0007031; peroxisome organization GO:0005779integral component of peroxisomal membrane


Orthologs (automatic annotation)
TAIR AT1G48635 : peroxin 3
RAP-DB (Rice) LOC_Os09g14510.1 : peroxin-3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a046435 , Zm00025a013726
Brachypodium -
Barley HORVU5Hr1G001310.4 , HORVU5Hr1G001310.5 , HORVU5Hr1G001310.1 , HORVU5Hr1G001310.2
Wheat -
Populus -


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cDNA sequences
Sobic.002G166300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G273600 CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed K02218: CSNK1, casein kinase 1
2 Sobic.003G233600 aspartyl aminopeptidase, putative, expressed K01267: aspartyl aminopeptidase
3 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
4 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
5 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
6 Sobic.009G199200 gamma-glutamyl hydrolase precursor, putative, expressed K01307: gamma-glutamyl hydrolase
7 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
8 Sobic.001G000200 TBC domain containing protein, expressed -
9 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
10 Sobic.003G169600 mitochondrial carrier protein, putative, expressed K15115: SLC25A32, solute carrier family 25 (mitochondrial folate transporter), member 32
11 Sobic.002G317300 CAMK_CAMK_like.33 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
12 Sobic.010G138000 FAD binding domain of DNA photolyase domain containing protein, expressed K12119: cryptochrome 2
13 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5
14 Sobic.001G493200 endonuclease/exonuclease/phosphatase family domain containing protein, expressed K12603: CNOT6, CCR4-NOT transcription complex subunit 6
15 Sobic.004G040900 CPuORF14 - conserved peptide uORF-containing transcript, expressed K03262: translation initiation factor 5
16 Sobic.001G120500 toc64, putative, expressed -
17 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
18 Sobic.004G092500 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
19 Sobic.009G017400 "gsn1/LARGE8(Ortholog in rice:Gou et al., 2018(PubMedID : 31659915)@dual specificity protein phosphatase, putative, expressed -
20 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic002G166300 Sobic002G166300 Sobic003G273600 Sobic003G273600 Sobic002G166300--Sobic003G273600 Sobic003G233600 Sobic003G233600 Sobic002G166300--Sobic003G233600 Sobic009G139900 Sobic009G139900 Sobic002G166300--Sobic009G139900 Sobic004G296400 Sobic004G296400 Sobic002G166300--Sobic004G296400 Sobic001G079200 Sobic001G079200 Sobic002G166300--Sobic001G079200 Sobic009G199200 Sobic009G199200 Sobic002G166300--Sobic009G199200 Sobic008G004600 Sobic008G004600 Sobic002G166300--Sobic008G004600 Sobic001G000200 Sobic001G000200 Sobic002G166300--Sobic001G000200 Sobic004G136300 Sobic004G136300 Sobic002G166300--Sobic004G136300 Sobic003G273600--Sobic002G166300 Sobic003G273600--Sobic003G233600 Sobic003G273600--Sobic001G079200 Sobic003G273600--Sobic009G139900 Sobic004G127700 Sobic004G127700 Sobic003G273600--Sobic004G127700 Sobic003G273600--Sobic008G004600 Sobic003G273600--Sobic004G296400 Sobic010G002400 Sobic010G002400 Sobic003G273600--Sobic010G002400 Sobic005G044800 Sobic005G044800 Sobic003G273600--Sobic005G044800 Sobic003G233600--Sobic004G127700 Sobic003G233600--Sobic002G166300 Sobic003G233600--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic003G233600--Sobic010G205800 Sobic003G233600--Sobic001G079200 Sobic003G233600--Sobic001G000200 Sobic003G233600--Sobic004G296400 Sobic003G233600--Sobic003G273600 Sobic003G233600--Sobic004G136300 Sobic009G139900--Sobic004G136300 Sobic009G139900--Sobic002G166300 Sobic010G138000 Sobic010G138000 Sobic009G139900--Sobic010G138000 Sobic009G139900--Sobic003G233600 Sobic009G139900--Sobic004G127700 Sobic009G143700 Sobic009G143700 Sobic009G139900--Sobic009G143700 Sobic009G139900--Sobic003G273600 Sobic007G054800 Sobic007G054800 Sobic009G139900--Sobic007G054800 Sobic001G333100 Sobic001G333100 Sobic009G139900--Sobic001G333100 Sobic004G296400--Sobic003G233600 Sobic003G169600 Sobic003G169600 Sobic004G296400--Sobic003G169600 Sobic004G296400--Sobic010G138000 Sobic001G085300 Sobic001G085300 Sobic004G296400--Sobic001G085300 Sobic002G116900 Sobic002G116900 Sobic004G296400--Sobic002G116900 Sobic004G296400--Sobic002G166300 Sobic001G390800 Sobic001G390800 Sobic004G296400--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic004G296400--Sobic001G124200 Sobic004G040900 Sobic004G040900 Sobic004G296400--Sobic004G040900 Sobic001G079200--Sobic001G390800 Sobic001G079200--Sobic010G205800 Sobic001G079200--Sobic003G233600 Sobic001G241100 Sobic001G241100 Sobic001G079200--Sobic001G241100 Sobic006G126100 Sobic006G126100 Sobic001G079200--Sobic006G126100 Sobic001G007000 Sobic001G007000 Sobic001G079200--Sobic001G007000 Sobic001G079200--Sobic003G273600 Sobic001G079200--Sobic003G169600 Sobic001G079200--Sobic001G000200 Sobic009G199200--Sobic001G000200 Sobic009G199200--Sobic003G233600 Sobic009G199200--Sobic008G004600 Sobic002G317300 Sobic002G317300 Sobic009G199200--Sobic002G317300 Sobic009G199200--Sobic010G205800 Sobic001G186800 Sobic001G186800 Sobic009G199200--Sobic001G186800 Sobic001G281600 Sobic001G281600 Sobic009G199200--Sobic001G281600 Sobic009G199200--Sobic002G166300 Sobic002G260900 Sobic002G260900 Sobic009G199200--Sobic002G260900 Sobic008G004600--Sobic006G126100 Sobic006G136400 Sobic006G136400 Sobic008G004600--Sobic006G136400 Sobic004G135400 Sobic004G135400 Sobic008G004600--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic008G004600--Sobic005G003300 Sobic008G004600--Sobic010G205800 Sobic006G208500 Sobic006G208500 Sobic008G004600--Sobic006G208500 Sobic004G039600 Sobic004G039600 Sobic008G004600--Sobic004G039600 Sobic008G004600--Sobic001G007000 Sobic002G359400 Sobic002G359400 Sobic008G004600--Sobic002G359400 Sobic001G000200--Sobic009G199200 Sobic001G000200--Sobic010G205800 Sobic006G237400 Sobic006G237400 Sobic001G000200--Sobic006G237400 Sobic001G253700 Sobic001G253700 Sobic001G000200--Sobic001G253700 Sobic001G000200--Sobic008G004600 Sobic001G000200--Sobic003G233600 Sobic001G291000 Sobic001G291000 Sobic001G000200--Sobic001G291000 Sobic001G000200--Sobic001G079200 Sobic001G071400 Sobic001G071400 Sobic001G000200--Sobic001G071400 Sobic004G136300--Sobic010G138000 Sobic004G136300--Sobic009G139900 Sobic009G133500 Sobic009G133500 Sobic004G136300--Sobic009G133500 Sobic003G164200 Sobic003G164200 Sobic004G136300--Sobic003G164200 Sobic005G096400 Sobic005G096400 Sobic004G136300--Sobic005G096400 Sobic010G139600 Sobic010G139600 Sobic004G136300--Sobic010G139600 Sobic004G136300--Sobic003G233600 Sobic006G041600 Sobic006G041600 Sobic004G136300--Sobic006G041600 Sobic003G155900 Sobic003G155900 Sobic004G136300--Sobic003G155900
Octagon: transcription factors


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