Gene annotation
Transcriptome id Sobic.003G273600.1
Synonym Sb03g032560, CKL2
Functional annotation CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed
UniProt C5XHN8
Pfam PF00069
Panther DB PTHR11909 PTHR11909:SF154
NCBI CDD -
KEGG Orthology K02218; CSNK1, casein kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G72710 : casein kinase 1-like protein 2
RAP-DB (Rice) LOC_Os01g51200.1 : CK1_CaseinKinase_1.3 - CK1 includes the casein kinase 1 kinases, expressed
MaizeGDB (Corn) Zm00025a027835 , Zm00025a038933
Brachypodium KQK09416
Barley HORVU3Hr1G066800.13 , HORVU3Hr1G049480.28 , HORVU3Hr1G049480.25 , HORVU3Hr1G049480.24 , HORVU3Hr1G049480.27 , HORVU3Hr1G049480.26 , HORVU3Hr1G049480.21 , HORVU3Hr1G049480.20 , HORVU3Hr1G049480.23 , HORVU3Hr1G049480.22 , HORVU3Hr1G066800.19 , HORVU3Hr1G066800.18 , HORVU3Hr1G066800.15 , HORVU3Hr1G066800.14 , HORVU3Hr1G066800.17 , HORVU3Hr1G066800.16 , HORVU3Hr1G066800.11 , HORVU3Hr1G066800.10 , HORVU3Hr1G066800.12 , HORVU3Hr1G049480.12 , HORVU3Hr1G049480.14 , HORVU3Hr1G049480.3 , HORVU3Hr1G049480.8 , HORVU3Hr1G049480.9 , HORVU3Hr1G049480.2 , HORVU3Hr1G049480.1 , HORVU3Hr1G049480.6 , HORVU3Hr1G049480.7 , HORVU3Hr1G049480.4 , HORVU3Hr1G049480.5 , HORVU3Hr1G049480.18 , HORVU3Hr1G049480.19 , HORVU3Hr1G049480.10 , HORVU3Hr1G049480.11 , HORVU3Hr1G049480.13 , HORVU3Hr1G049480.15 , HORVU3Hr1G049480.16 , HORVU3Hr1G049480.17 , HORVU3Hr1G066800.20 , HORVU3Hr1G066800.21 , HORVU3Hr1G066800.22 , HORVU3Hr1G066800.23 , HORVU3Hr1G066800.9 , HORVU3Hr1G066800.8 , HORVU3Hr1G066800.1 , HORVU3Hr1G066800.3 , HORVU3Hr1G066800.2 , HORVU3Hr1G066800.5 , HORVU3Hr1G066800.4 , HORVU3Hr1G066800.7 , HORVU3Hr1G066800.6
Wheat TraesCS3B02G281100 , TraesCS3B02G281100 , TraesCS3A02G251600 , TraesCS3A02G251600 , TraesCS3D02G252000 , TraesCS3D02G252000 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3D02G208900 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3B02G238800 , TraesCS3A02G207000 , TraesCS3A02G207000 , TraesCS3A02G207000 , TraesCS3A02G207000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G166300 peroxin-3 family protein, putative, expressed K13336: peroxin-3
2 Sobic.003G233600 aspartyl aminopeptidase, putative, expressed K01267: aspartyl aminopeptidase
3 Sobic.001G079200 STE_MEKK_ste11_MAP3K.15 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
4 Sobic.009G139900 rab GDP dissociation inhibitor alpha, putative, expressed K17255: Rab GDP dissociation inhibitor
5 Sobic.004G127700 alpha-1,2-fucosidase, putative, expressed K15923: AXY8, FUC95A, alpha-L-fucosidase 2
6 Sobic.008G004600 ubiquitin-activating enzyme, putative, expressed K03178: UBE1, ubiquitin-activating enzyme E1
7 Sobic.004G296400 amino acid permease, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
8 Sobic.010G002400 glutamine cyclotransferase precursor, putative, expressed -
9 Sobic.005G044800 hydrolase, alpha/beta fold family domain containing protein, expressed -
10 Sobic.010G123400 GRAM and C2 domains containing protein, putative, expressed -
11 Sobic.004G136300 Sec1 family transport protein, putative, expressed K15292: STXBP1, syntaxin-binding protein 1
12 Sobic.002G137400 protein binding protein, putative, expressed -
13 Sobic.010G004100 expressed protein -
14 Sobic.009G143700 no apical meristem protein, putative, expressed -
15 Sobic.001G390800 transcription factor HBP-1b, putative, expressed K14431: transcription factor TGA
16 Sobic.001G201500 - K12614: DDX6, RCK, ATP-dependent RNA helicase DDX6/DHH1
17 Sobic.003G331400 expressed protein -
18 Sobic.006G126100 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
19 Sobic.001G000200 TBC domain containing protein, expressed -
20 Sobic.009G075800 serine/threonine protein phosphatase 5, putative, expressed K04460: serine/threonine-protein phosphatase 5


Gene co-expression network
sample Sobic003G273600 Sobic003G273600 Sobic002G166300 Sobic002G166300 Sobic003G273600--Sobic002G166300 Sobic003G233600 Sobic003G233600 Sobic003G273600--Sobic003G233600 Sobic001G079200 Sobic001G079200 Sobic003G273600--Sobic001G079200 Sobic009G139900 Sobic009G139900 Sobic003G273600--Sobic009G139900 Sobic004G127700 Sobic004G127700 Sobic003G273600--Sobic004G127700 Sobic008G004600 Sobic008G004600 Sobic003G273600--Sobic008G004600 Sobic004G296400 Sobic004G296400 Sobic003G273600--Sobic004G296400 Sobic010G002400 Sobic010G002400 Sobic003G273600--Sobic010G002400 Sobic005G044800 Sobic005G044800 Sobic003G273600--Sobic005G044800 Sobic002G166300--Sobic003G273600 Sobic002G166300--Sobic003G233600 Sobic002G166300--Sobic009G139900 Sobic002G166300--Sobic004G296400 Sobic002G166300--Sobic001G079200 Sobic009G199200 Sobic009G199200 Sobic002G166300--Sobic009G199200 Sobic002G166300--Sobic008G004600 Sobic001G000200 Sobic001G000200 Sobic002G166300--Sobic001G000200 Sobic004G136300 Sobic004G136300 Sobic002G166300--Sobic004G136300 Sobic003G233600--Sobic004G127700 Sobic003G233600--Sobic002G166300 Sobic003G233600--Sobic009G199200 Sobic010G205800 Sobic010G205800 Sobic003G233600--Sobic010G205800 Sobic003G233600--Sobic001G079200 Sobic003G233600--Sobic001G000200 Sobic003G233600--Sobic004G296400 Sobic003G233600--Sobic003G273600 Sobic003G233600--Sobic004G136300 Sobic001G390800 Sobic001G390800 Sobic001G079200--Sobic001G390800 Sobic001G079200--Sobic010G205800 Sobic001G079200--Sobic003G233600 Sobic001G241100 Sobic001G241100 Sobic001G079200--Sobic001G241100 Sobic006G126100 Sobic006G126100 Sobic001G079200--Sobic006G126100 Sobic001G007000 Sobic001G007000 Sobic001G079200--Sobic001G007000 Sobic001G079200--Sobic003G273600 Sobic003G169600 Sobic003G169600 Sobic001G079200--Sobic003G169600 Sobic001G079200--Sobic001G000200 Sobic009G139900--Sobic004G136300 Sobic009G139900--Sobic002G166300 Sobic010G138000 Sobic010G138000 Sobic009G139900--Sobic010G138000 Sobic009G139900--Sobic003G233600 Sobic009G139900--Sobic004G127700 Sobic009G143700 Sobic009G143700 Sobic009G139900--Sobic009G143700 Sobic009G139900--Sobic003G273600 Sobic007G054800 Sobic007G054800 Sobic009G139900--Sobic007G054800 Sobic001G333100 Sobic001G333100 Sobic009G139900--Sobic001G333100 Sobic004G127700--Sobic003G233600 Sobic009G094300 Sobic009G094300 Sobic004G127700--Sobic009G094300 Sobic002G308500 Sobic002G308500 Sobic004G127700--Sobic002G308500 Sobic004G339100 Sobic004G339100 Sobic004G127700--Sobic004G339100 Sobic001G120300 Sobic001G120300 Sobic004G127700--Sobic001G120300 Sobic001G111150 Sobic001G111150 Sobic004G127700--Sobic001G111150 Sobic004G127700--Sobic009G139900 Sobic009G057300 Sobic009G057300 Sobic004G127700--Sobic009G057300 Sobic004G127700--Sobic004G136300 Sobic008G004600--Sobic006G126100 Sobic006G136400 Sobic006G136400 Sobic008G004600--Sobic006G136400 Sobic004G135400 Sobic004G135400 Sobic008G004600--Sobic004G135400 Sobic005G003300 Sobic005G003300 Sobic008G004600--Sobic005G003300 Sobic008G004600--Sobic010G205800 Sobic006G208500 Sobic006G208500 Sobic008G004600--Sobic006G208500 Sobic004G039600 Sobic004G039600 Sobic008G004600--Sobic004G039600 Sobic008G004600--Sobic001G007000 Sobic002G359400 Sobic002G359400 Sobic008G004600--Sobic002G359400 Sobic004G296400--Sobic003G233600 Sobic004G296400--Sobic003G169600 Sobic004G296400--Sobic010G138000 Sobic001G085300 Sobic001G085300 Sobic004G296400--Sobic001G085300 Sobic002G116900 Sobic002G116900 Sobic004G296400--Sobic002G116900 Sobic004G296400--Sobic002G166300 Sobic004G296400--Sobic001G390800 Sobic001G124200 Sobic001G124200 Sobic004G296400--Sobic001G124200 Sobic004G040900 Sobic004G040900 Sobic004G296400--Sobic004G040900 Sobic003G338500 Sobic003G338500 Sobic010G002400--Sobic003G338500 Sobic004G275700 Sobic004G275700 Sobic010G002400--Sobic004G275700 Sobic001G201500 Sobic001G201500 Sobic010G002400--Sobic001G201500 Sobic010G193900 Sobic010G193900 Sobic010G002400--Sobic010G193900 Sobic005G155700 Sobic005G155700 Sobic010G002400--Sobic005G155700 Sobic010G223300 Sobic010G223300 Sobic010G002400--Sobic010G223300 Sobic010G002400--Sobic002G308500 Sobic003G012200 Sobic003G012200 Sobic010G002400--Sobic003G012200 Sobic006G176600 Sobic006G176600 Sobic010G002400--Sobic006G176600 Sobic004G358600 Sobic004G358600 Sobic005G044800--Sobic004G358600 Sobic005G044800--Sobic003G012200 Sobic003G372000 Sobic003G372000 Sobic005G044800--Sobic003G372000 Sobic006G244700 Sobic006G244700 Sobic005G044800--Sobic006G244700 Sobic003G344900 Sobic003G344900 Sobic005G044800--Sobic003G344900 Sobic005G044800--Sobic004G127700 Sobic005G044800--Sobic002G116900 Sobic005G044800--Sobic003G273600 Sobic003G055700 Sobic003G055700 Sobic005G044800--Sobic003G055700
Octagon: transcription factors


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