Gene annotation
Transcriptome id Sobic.003G331400.1
Synonym Sb03g037690
Functional annotation expressed protein
UniProt C5XN49
Pfam -
Panther DB PTHR33870 PTHR33870:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17910 : -
RAP-DB (Rice) LOC_Os01g59670.1 : expressed protein
MaizeGDB (Corn) Zm00025a027135 , Zm00025a027132
Brachypodium KQK10258
Barley HORVU3Hr1G079500.2 , HORVU3Hr1G079500.1 , HORVU3Hr1G079500.3 , HORVU3Hr1G079500.4
Wheat TraesCS2A02G242500 , TraesCS3B02G367600 , TraesCS3D02G329500 , TraesCS7B02G031700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G344901 - K10357: myosin V
2 Sobic.002G137400 protein binding protein, putative, expressed -
3 Sobic.001G415300 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
4 Sobic.004G358400 callose synthase-like enzyme(PubMedID : 25311645)@1,3-beta-glucan synthase component domain containing protein, expressed K11000: callose synthase
5 Sobic.004G004300 expressed protein -
6 Sobic.002G031100 resistance protein LR10, putative, expressed -
7 Sobic.005G026200 HEAT repeat family protein, putative, expressed K11886: proteasome component ECM29
8 Sobic.010G004100 expressed protein -
9 Sobic.001G163400 roothairless 1, putative, expressed -
10 Sobic.003G337300 HEAT repeat family protein, putative, expressed K08876: SCY1-like protein 1
11 Sobic.001G015800 serine/threonine protein phosphatase 2A 59 kDa regulatory subunit Bgamma isoform, putative, expressed K11584: serine/threonine-protein phosphatase 2A regulatory subunit B'
12 Sobic.004G002100 G-protein alpha subunit, putative, expressed -
13 Sobic.009G042700 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
14 Sobic.004G261600 expressed protein -
15 Sobic.008G003700 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
16 Sobic.001G127200 zinc finger family protein, putative, expressed -
17 Sobic.001G281100 START domain containing protein, expressed -
18 Sobic.005G003300 clathrin heavy chain, putative, expressed K04646: clathrin heavy chain
19 Sobic.008G123500 auxilin, putative, expressed -
20 Sobic.001G193000 STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -


Gene co-expression network
sample Sobic003G331400 Sobic003G331400 Sobic004G344901 Sobic004G344901 Sobic003G331400--Sobic004G344901 Sobic002G137400 Sobic002G137400 Sobic003G331400--Sobic002G137400 Sobic001G415300 Sobic001G415300 Sobic003G331400--Sobic001G415300 Sobic004G358400 Sobic004G358400 Sobic003G331400--Sobic004G358400 Sobic004G004300 Sobic004G004300 Sobic003G331400--Sobic004G004300 Sobic002G031100 Sobic002G031100 Sobic003G331400--Sobic002G031100 Sobic005G026200 Sobic005G026200 Sobic003G331400--Sobic005G026200 Sobic010G004100 Sobic010G004100 Sobic003G331400--Sobic010G004100 Sobic001G163400 Sobic001G163400 Sobic003G331400--Sobic001G163400 Sobic004G344901--Sobic003G331400 Sobic003G337300 Sobic003G337300 Sobic004G344901--Sobic003G337300 Sobic004G344901--Sobic001G163400 Sobic006G131000 Sobic006G131000 Sobic004G344901--Sobic006G131000 Sobic004G344901--Sobic004G004300 Sobic004G344901--Sobic001G415300 Sobic008G003700 Sobic008G003700 Sobic004G344901--Sobic008G003700 Sobic001G281100 Sobic001G281100 Sobic004G344901--Sobic001G281100 Sobic004G344901--Sobic002G137400 Sobic002G137400--Sobic001G415300 Sobic004G002100 Sobic004G002100 Sobic002G137400--Sobic004G002100 Sobic002G137400--Sobic010G004100 Sobic002G137400--Sobic003G337300 Sobic002G137400--Sobic003G331400 Sobic002G137400--Sobic001G281100 Sobic002G137400--Sobic004G004300 Sobic001G534800 Sobic001G534800 Sobic002G137400--Sobic001G534800 Sobic002G137400--Sobic002G031100 Sobic001G415300--Sobic002G137400 Sobic001G415300--Sobic004G004300 Sobic001G415300--Sobic001G281100 Sobic001G085300 Sobic001G085300 Sobic001G415300--Sobic001G085300 Sobic001G415300--Sobic003G337300 Sobic006G126100 Sobic006G126100 Sobic001G415300--Sobic006G126100 Sobic001G415300--Sobic001G534800 Sobic001G415300--Sobic004G002100 Sobic001G457900 Sobic001G457900 Sobic001G415300--Sobic001G457900 Sobic004G358400--Sobic004G004300 Sobic004G358400--Sobic005G026200 Sobic004G358400--Sobic001G281100 Sobic010G275500 Sobic010G275500 Sobic004G358400--Sobic010G275500 Sobic004G358400--Sobic001G534800 Sobic004G358400--Sobic003G331400 Sobic004G358400--Sobic004G344901 Sobic001G196500 Sobic001G196500 Sobic004G358400--Sobic001G196500 Sobic001G251200 Sobic001G251200 Sobic004G358400--Sobic001G251200 Sobic004G004300--Sobic001G281100 Sobic004G004300--Sobic005G026200 Sobic004G004300--Sobic001G534800 Sobic004G004300--Sobic006G126100 Sobic001G117200 Sobic001G117200 Sobic004G004300--Sobic001G117200 Sobic004G004200 Sobic004G004200 Sobic004G004300--Sobic004G004200 Sobic004G004300--Sobic001G415300 Sobic004G004300--Sobic010G275500 Sobic005G003300 Sobic005G003300 Sobic004G004300--Sobic005G003300 Sobic002G031100--Sobic004G002100 Sobic002G031100--Sobic002G137400 Sobic002G031100--Sobic001G415300 Sobic002G031100--Sobic003G331400 Sobic004G261600 Sobic004G261600 Sobic002G031100--Sobic004G261600 Sobic010G093100 Sobic010G093100 Sobic002G031100--Sobic010G093100 Sobic001G127200 Sobic001G127200 Sobic002G031100--Sobic001G127200 Sobic002G031100--Sobic001G281100 Sobic002G031100--Sobic004G344901 Sobic005G026200--Sobic004G004300 Sobic005G026200--Sobic001G534800 Sobic005G026200--Sobic001G281100 Sobic005G026200--Sobic005G003300 Sobic002G397500 Sobic002G397500 Sobic005G026200--Sobic002G397500 Sobic010G053800 Sobic010G053800 Sobic005G026200--Sobic010G053800 Sobic003G072200 Sobic003G072200 Sobic005G026200--Sobic003G072200 Sobic001G065000 Sobic001G065000 Sobic005G026200--Sobic001G065000 Sobic004G113400 Sobic004G113400 Sobic005G026200--Sobic004G113400 Sobic007G163100 Sobic007G163100 Sobic010G004100--Sobic007G163100 Sobic010G004100--Sobic001G117200 Sobic010G004100--Sobic002G137400 Sobic010G004100--Sobic003G337300 Sobic003G104000 Sobic003G104000 Sobic010G004100--Sobic003G104000 Sobic010G004100--Sobic004G113400 Sobic003G408600 Sobic003G408600 Sobic010G004100--Sobic003G408600 Sobic010G004100--Sobic004G004300 Sobic010G004100--Sobic001G415300 Sobic001G163400--Sobic004G344901 Sobic001G163400--Sobic003G337300 Sobic001G015800 Sobic001G015800 Sobic001G163400--Sobic001G015800 Sobic001G163400--Sobic006G131000 Sobic004G039600 Sobic004G039600 Sobic001G163400--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic001G163400--Sobic001G096000 Sobic001G163400--Sobic001G415300 Sobic001G124200 Sobic001G124200 Sobic001G163400--Sobic001G124200 Sobic006G163800 Sobic006G163800 Sobic001G163400--Sobic006G163800
Octagon: transcription factors


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