Gene annotation
Transcriptome id Sobic.001G193000.2,Sobic.001G193000.1
Synonym Sb01g016990
Functional annotation STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt C5WVC7 , A0A1B6QJT2
Pfam PF00069
Panther DB PTHR24361 PTHR24361:SF363
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G24100 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os10g37480.1 : STE_PAK_Ste20_STLK.6 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a000202 , Zm00025a017413 , Zm00025a006284
Brachypodium PNT67733 , PNT67732 , PNT67731 , PNT67730 , PNT67734 , KQJ97481 , KQK24030 , KQK24031
Barley HORVU1Hr1G048230.16 , HORVU1Hr1G048230.17 , HORVU1Hr1G048230.14 , HORVU1Hr1G048230.15 , HORVU1Hr1G048230.12 , HORVU1Hr1G048230.13 , HORVU1Hr1G048230.10 , HORVU1Hr1G048230.11 , HORVU1Hr1G048230.18 , HORVU1Hr1G048230.19 , HORVU4Hr1G088910.12 , HORVU4Hr1G088910.10 , HORVU4Hr1G088910.14 , HORVU1Hr1G048230.4 , HORVU1Hr1G048230.5 , HORVU1Hr1G048230.6 , HORVU1Hr1G048230.7 , HORVU1Hr1G048230.1 , HORVU1Hr1G048230.2 , HORVU1Hr1G048230.9 , HORVU1Hr1G048230.8 , HORVU4Hr1G088910.16 , HORVU4Hr1G088910.13 , HORVU4Hr1G088910.11 , HORVU4Hr1G088910.17 , HORVU4Hr1G088910.15 , HORVU4Hr1G088910.1 , HORVU4Hr1G088910.2 , HORVU4Hr1G088910.3 , HORVU4Hr1G088910.4 , HORVU4Hr1G088910.5 , HORVU4Hr1G088910.6 , HORVU4Hr1G088910.7 , HORVU4Hr1G088910.8 , HORVU4Hr1G088910.9 , HORVU1Hr1G048230.21 , HORVU1Hr1G048230.20
Wheat TraesCS1D02G185000 , TraesCS1D02G185000 , TraesCS1D02G185000 , TraesCS1D02G185000 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS5A02G556400 , TraesCS4B02G395600 , TraesCS1A02G181900 , TraesCS1A02G181900 , TraesCS1D02G185000 , TraesCS1B02G199100 , TraesCS1B02G199100
Populus -


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cDNA sequences
Sobic.001G193000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G146500 ataxin-2 related protein, putative, expressed -
2 Sobic.003G187500 ATP-binding region, ATPase-like domain containing protein, expressed -
3 Sobic.001G220300 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''
4 Sobic.001G281100 START domain containing protein, expressed -
5 Sobic.002G137400 protein binding protein, putative, expressed -
6 Sobic.003G195500 SEY1, putative, expressed -
7 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
8 Sobic.004G264400 TBC domain containing protein, expressed -
9 Sobic.001G163400 roothairless 1, putative, expressed -
10 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
11 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
12 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
13 Sobic.004G269200 protein kinase, putative, expressed K18670: dual specificity protein kinase YAK1
14 Sobic.004G344901 - K10357: myosin V
15 Sobic.009G042700 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed -
16 Sobic.010G053800 AP-1 complex subunit gamma-1, putative, expressed K12391: AP-1 complex subunit gamma-1
17 Sobic.006G163800 diacylglycerol kinase, putative, expressed -
18 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
19 Sobic.007G207000 Highest expression level in primordial inflorescence(PubMedID : 27501690)@OsSPL15 - SBP-box gene family member, expressed -
20 Sobic.010G275500 EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic001G193000 Sobic001G193000 Sobic004G146500 Sobic004G146500 Sobic001G193000--Sobic004G146500 Sobic003G187500 Sobic003G187500 Sobic001G193000--Sobic003G187500 Sobic001G220300 Sobic001G220300 Sobic001G193000--Sobic001G220300 Sobic001G281100 Sobic001G281100 Sobic001G193000--Sobic001G281100 Sobic002G137400 Sobic002G137400 Sobic001G193000--Sobic002G137400 Sobic003G195500 Sobic003G195500 Sobic001G193000--Sobic003G195500 Sobic007G119200 Sobic007G119200 Sobic001G193000--Sobic007G119200 Sobic004G264400 Sobic004G264400 Sobic001G193000--Sobic004G264400 Sobic001G163400 Sobic001G163400 Sobic001G193000--Sobic001G163400 Sobic001G109800 Sobic001G109800 Sobic004G146500--Sobic001G109800 Sobic010G069100 Sobic010G069100 Sobic004G146500--Sobic010G069100 Sobic002G297200 Sobic002G297200 Sobic004G146500--Sobic002G297200 Sobic004G146500--Sobic007G119200 Sobic004G274200 Sobic004G274200 Sobic004G146500--Sobic004G274200 Sobic004G146500--Sobic001G220300 Sobic001G155000 Sobic001G155000 Sobic004G146500--Sobic001G155000 Sobic002G034600 Sobic002G034600 Sobic004G146500--Sobic002G034600 Sobic008G047800 Sobic008G047800 Sobic004G146500--Sobic008G047800 Sobic010G053800 Sobic010G053800 Sobic003G187500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic003G187500--Sobic004G072100 Sobic007G132100 Sobic007G132100 Sobic003G187500--Sobic007G132100 Sobic002G310200 Sobic002G310200 Sobic003G187500--Sobic002G310200 Sobic010G275500 Sobic010G275500 Sobic003G187500--Sobic010G275500 Sobic003G187500--Sobic008G047800 Sobic004G039600 Sobic004G039600 Sobic003G187500--Sobic004G039600 Sobic006G012500 Sobic006G012500 Sobic003G187500--Sobic006G012500 Sobic010G236400 Sobic010G236400 Sobic003G187500--Sobic010G236400 Sobic001G220300--Sobic004G146500 Sobic001G220300--Sobic008G047800 Sobic002G315200 Sobic002G315200 Sobic001G220300--Sobic002G315200 Sobic010G101800 Sobic010G101800 Sobic001G220300--Sobic010G101800 Sobic001G220300--Sobic001G109800 Sobic009G191000 Sobic009G191000 Sobic001G220300--Sobic009G191000 Sobic004G065100 Sobic004G065100 Sobic001G220300--Sobic004G065100 Sobic001G220300--Sobic004G274200 Sobic001G220300--Sobic002G297200 Sobic001G534800 Sobic001G534800 Sobic001G281100--Sobic001G534800 Sobic004G004300 Sobic004G004300 Sobic001G281100--Sobic004G004300 Sobic001G065000 Sobic001G065000 Sobic001G281100--Sobic001G065000 Sobic005G026200 Sobic005G026200 Sobic001G281100--Sobic005G026200 Sobic008G099800 Sobic008G099800 Sobic001G281100--Sobic008G099800 Sobic003G229500 Sobic003G229500 Sobic001G281100--Sobic003G229500 Sobic001G281100--Sobic006G012500 Sobic001G281100--Sobic004G072100 Sobic001G281100--Sobic010G275500 Sobic001G415300 Sobic001G415300 Sobic002G137400--Sobic001G415300 Sobic004G002100 Sobic004G002100 Sobic002G137400--Sobic004G002100 Sobic010G004100 Sobic010G004100 Sobic002G137400--Sobic010G004100 Sobic003G337300 Sobic003G337300 Sobic002G137400--Sobic003G337300 Sobic003G331400 Sobic003G331400 Sobic002G137400--Sobic003G331400 Sobic002G137400--Sobic001G281100 Sobic002G137400--Sobic004G004300 Sobic002G137400--Sobic001G534800 Sobic002G031100 Sobic002G031100 Sobic002G137400--Sobic002G031100 Sobic003G195500--Sobic001G065000 Sobic003G195500--Sobic006G012500 Sobic003G195500--Sobic001G534800 Sobic003G195500--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic003G195500--Sobic004G178200 Sobic003G195500--Sobic001G281100 Sobic003G195500--Sobic004G146500 Sobic003G195500--Sobic007G119200 Sobic006G131000 Sobic006G131000 Sobic003G195500--Sobic006G131000 Sobic007G119200--Sobic002G034600 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic002G264200 Sobic002G264200 Sobic007G119200--Sobic002G264200 Sobic001G088100 Sobic001G088100 Sobic007G119200--Sobic001G088100 Sobic004G264400--Sobic001G109800 Sobic009G113000 Sobic009G113000 Sobic004G264400--Sobic009G113000 Sobic002G132000 Sobic002G132000 Sobic004G264400--Sobic002G132000 Sobic007G024700 Sobic007G024700 Sobic004G264400--Sobic007G024700 Sobic004G331100 Sobic004G331100 Sobic004G264400--Sobic004G331100 Sobic006G115600 Sobic006G115600 Sobic004G264400--Sobic006G115600 Sobic004G264400--Sobic001G065000 Sobic004G264400--Sobic004G274200 Sobic007G075400 Sobic007G075400 Sobic004G264400--Sobic007G075400 Sobic004G344901 Sobic004G344901 Sobic001G163400--Sobic004G344901 Sobic001G163400--Sobic003G337300 Sobic001G015800 Sobic001G015800 Sobic001G163400--Sobic001G015800 Sobic001G163400--Sobic006G131000 Sobic001G163400--Sobic004G039600 Sobic001G096000 Sobic001G096000 Sobic001G163400--Sobic001G096000 Sobic001G163400--Sobic001G415300 Sobic001G124200 Sobic001G124200 Sobic001G163400--Sobic001G124200 Sobic006G163800 Sobic006G163800 Sobic001G163400--Sobic006G163800
Octagon: transcription factors


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