Gene annotation
Transcriptome id Sobic.001G088100.2,Sobic.001G088100.3
Synonym ADA2B, Sb01g007950, PRZ1
Functional annotation transcriptional adaptor, putative, expressed
UniProt C5X0B4
Pfam PF00569 PF00249
Panther DB PTHR12374 PTHR12374:SF23
NCBI CDD KOG0457; Histone acetyltransferase complex SAGA/ADA, subunit ADA2
KEGG Orthology K11314; TADA2A, transcriptional adapter 2-alpha
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT4G16420 : homolog of yeast ADA2 2B
RAP-DB (Rice) LOC_Os03g53960.1 : transcriptional adaptor, putative, expressed
MaizeGDB (Corn) Zm00025a008172 , Zm00025a016793
Brachypodium KQK13184
Barley HORVU5Hr1G095400.5 , HORVU5Hr1G095400.4 , HORVU5Hr1G095400.7 , HORVU5Hr1G095400.6 , HORVU5Hr1G095400.1 , HORVU5Hr1G095400.3 , HORVU5Hr1G095400.2 , HORVU5Hr1G095400.9 , HORVU5Hr1G095400.8
Wheat TraesCS5D02G400100 , TraesCS5D02G400100 , TraesCS5A02G390300 , TraesCS5A02G390300 , TraesCS5B02G395200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G005500 expressed protein -
2 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
3 Sobic.010G069100 expressed protein -
4 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
5 Sobic.003G394300 tetratricopeptide repeat domain containing protein, expressed -
6 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
7 Sobic.001G241200 protein kinase domain containing protein, expressed -
8 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
9 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
10 Sobic.003G266001 - -
11 Sobic.001G016000 expressed protein K07759: poly(ADP-ribose) glycohydrolase
12 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
13 Sobic.008G103200 OsPOP1 - Putative Prolyl Oligopeptidase homologue, expressed K01322: prolyl oligopeptidase
14 Sobic.007G117400 expressed protein -
15 Sobic.007G009700 nucleic acid binding protein, putative, expressed K12839: SMNDC1, survival of motor neuron-related-splicing factor 30
16 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
17 Sobic.002G366400 histone deacetylase, putative, expressed K11407: histone deacetylase 6
18 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
19 Sobic.005G128400 NLI interacting factor-like phosphatase, putative, expressed K18999: RNA polymerase II C-terminal domain phosphatase-like 3/4
20 Sobic.003G293200 plus-3 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G088100 Sobic001G088100 Sobic009G005500 Sobic009G005500 Sobic001G088100--Sobic009G005500 Sobic007G119200 Sobic007G119200 Sobic001G088100--Sobic007G119200 Sobic010G069100 Sobic010G069100 Sobic001G088100--Sobic010G069100 Sobic010G236400 Sobic010G236400 Sobic001G088100--Sobic010G236400 Sobic003G394300 Sobic003G394300 Sobic001G088100--Sobic003G394300 Sobic007G105100 Sobic007G105100 Sobic001G088100--Sobic007G105100 Sobic001G241200 Sobic001G241200 Sobic001G088100--Sobic001G241200 Sobic004G274200 Sobic004G274200 Sobic001G088100--Sobic004G274200 Sobic003G408600 Sobic003G408600 Sobic001G088100--Sobic003G408600 Sobic009G005500--Sobic010G069100 Sobic009G005500--Sobic001G088100 Sobic001G289600 Sobic001G289600 Sobic009G005500--Sobic001G289600 Sobic007G117400 Sobic007G117400 Sobic009G005500--Sobic007G117400 Sobic001G540400 Sobic001G540400 Sobic009G005500--Sobic001G540400 Sobic008G047800 Sobic008G047800 Sobic009G005500--Sobic008G047800 Sobic003G389200 Sobic003G389200 Sobic009G005500--Sobic003G389200 Sobic001G409600 Sobic001G409600 Sobic009G005500--Sobic001G409600 Sobic009G005500--Sobic007G105100 Sobic002G034600 Sobic002G034600 Sobic007G119200--Sobic002G034600 Sobic004G146500 Sobic004G146500 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic001G109800 Sobic001G109800 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic002G264200 Sobic002G264200 Sobic007G119200--Sobic002G264200 Sobic007G119200--Sobic001G088100 Sobic002G071500 Sobic002G071500 Sobic010G069100--Sobic002G071500 Sobic010G069100--Sobic002G264200 Sobic005G112300 Sobic005G112300 Sobic010G069100--Sobic005G112300 Sobic010G069100--Sobic008G047800 Sobic008G009700 Sobic008G009700 Sobic010G069100--Sobic008G009700 Sobic001G154900 Sobic001G154900 Sobic010G069100--Sobic001G154900 Sobic010G069100--Sobic004G146500 Sobic007G065400 Sobic007G065400 Sobic010G069100--Sobic007G065400 Sobic010G069100--Sobic009G005500 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic010G236400--Sobic002G264200 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100 Sobic003G445400 Sobic003G445400 Sobic003G394300--Sobic003G445400 Sobic003G394300--Sobic004G084300 Sobic003G307000 Sobic003G307000 Sobic003G394300--Sobic003G307000 Sobic004G088200 Sobic004G088200 Sobic003G394300--Sobic004G088200 Sobic005G021500 Sobic005G021500 Sobic003G394300--Sobic005G021500 Sobic008G067600 Sobic008G067600 Sobic003G394300--Sobic008G067600 Sobic004G158200 Sobic004G158200 Sobic003G394300--Sobic004G158200 Sobic009G000500 Sobic009G000500 Sobic003G394300--Sobic009G000500 Sobic007G078600 Sobic007G078600 Sobic003G394300--Sobic007G078600 Sobic007G105100--Sobic005G112300 Sobic007G105100--Sobic001G289600 Sobic007G105100--Sobic003G408600 Sobic010G010700 Sobic010G010700 Sobic007G105100--Sobic010G010700 Sobic007G062800 Sobic007G062800 Sobic007G105100--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic007G105100--Sobic005G008800 Sobic007G105100--Sobic001G540400 Sobic003G360400 Sobic003G360400 Sobic007G105100--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic007G105100--Sobic010G112100 Sobic001G241200--Sobic007G117400 Sobic001G241200--Sobic005G112300 Sobic004G065100 Sobic004G065100 Sobic001G241200--Sobic004G065100 Sobic002G309600 Sobic002G309600 Sobic001G241200--Sobic002G309600 Sobic001G241200--Sobic005G008800 Sobic001G241200--Sobic008G009700 Sobic001G241200--Sobic001G154900 Sobic003G119000 Sobic003G119000 Sobic001G241200--Sobic003G119000 Sobic001G241200--Sobic001G540400 Sobic004G274200--Sobic008G047800 Sobic004G274200--Sobic010G236400 Sobic004G274200--Sobic004G146500 Sobic004G021100 Sobic004G021100 Sobic004G274200--Sobic004G021100 Sobic008G112800 Sobic008G112800 Sobic004G274200--Sobic008G112800 Sobic003G352200 Sobic003G352200 Sobic004G274200--Sobic003G352200 Sobic009G044800 Sobic009G044800 Sobic004G274200--Sobic009G044800 Sobic004G274200--Sobic002G071500 Sobic001G114000 Sobic001G114000 Sobic004G274200--Sobic001G114000 Sobic003G408600--Sobic001G540400 Sobic003G408600--Sobic005G008800 Sobic002G397500 Sobic002G397500 Sobic003G408600--Sobic002G397500 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic003G408600--Sobic010G112100 Sobic001G058700 Sobic001G058700 Sobic003G408600--Sobic001G058700 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600
Octagon: transcription factors


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