Gene annotation
Transcriptome id Sobic.001G016000.2,Sobic.001G016000.1
Synonym TEJ, Sb01g001560
Functional annotation expressed protein
UniProt C5WSZ9 , C5WSZ7
Pfam PF05028
Panther DB PTHR12837
NCBI CDD KOG2064; Poly(ADP-ribose) glycohydrolase
KEGG Orthology K07759; poly(ADP-ribose) glycohydrolase
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004649poly(ADP-ribose) glycohydrolase activity


Orthologs (automatic annotation)
TAIR AT2G31870 : Poly (ADP-ribose) glycohydrolase (PARG)
RAP-DB (Rice) LOC_Os03g62680.1 : expressed protein
MaizeGDB (Corn) Zm00025a008989
Brachypodium KQK12168 , PNT73808
Barley HORVU5Hr1G120400.9 , HORVU5Hr1G120400.2 , HORVU5Hr1G120400.3 , HORVU5Hr1G120400.1 , HORVU5Hr1G120400.4 , HORVU5Hr1G120400.5 , HORVU5Hr1G120400.20 , HORVU5Hr1G120400.18 , HORVU5Hr1G120400.19 , HORVU5Hr1G120400.10 , HORVU5Hr1G120400.12 , HORVU5Hr1G120400.14 , HORVU5Hr1G120400.15 , HORVU5Hr1G120400.16 , HORVU5Hr1G120400.17
Wheat TraesCS4A02G342200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G034600 zinc ion binding protein, putative, expressed -
2 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
3 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
4 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
5 Sobic.004G205600 bromodomain domain containing protein, expressed -
6 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
7 Sobic.002G283600 AGAP005770-PA, putative, expressed -
8 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
9 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
10 Sobic.001G088100 transcriptional adaptor, putative, expressed K11314: TADA2A, transcriptional adapter 2-alpha
11 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
12 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
13 Sobic.004G146500 ataxin-2 related protein, putative, expressed -
14 Sobic.006G133800 myb-like DNA-binding domain containing protein, expressed -
15 Sobic.002G264200 RNA recognition motif containing protein, expressed -
16 Sobic.002G297200 ZOS9-19 - C2H2 zinc finger protein, expressed -
17 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
18 Sobic.007G009400 bromodomain domain containing protein, expressed -
19 Sobic.001G109800 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C member, putative, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
20 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16


Gene co-expression network
sample Sobic001G016000 Sobic001G016000 Sobic002G034600 Sobic002G034600 Sobic001G016000--Sobic002G034600 Sobic010G236400 Sobic010G236400 Sobic001G016000--Sobic010G236400 Sobic003G397800 Sobic003G397800 Sobic001G016000--Sobic003G397800 Sobic001G409600 Sobic001G409600 Sobic001G016000--Sobic001G409600 Sobic004G205600 Sobic004G205600 Sobic001G016000--Sobic004G205600 Sobic004G274200 Sobic004G274200 Sobic001G016000--Sobic004G274200 Sobic002G283600 Sobic002G283600 Sobic001G016000--Sobic002G283600 Sobic007G119200 Sobic007G119200 Sobic001G016000--Sobic007G119200 Sobic006G173100 Sobic006G173100 Sobic001G016000--Sobic006G173100 Sobic009G198100 Sobic009G198100 Sobic002G034600--Sobic009G198100 Sobic002G034600--Sobic007G119200 Sobic003G081000 Sobic003G081000 Sobic002G034600--Sobic003G081000 Sobic001G473600 Sobic001G473600 Sobic002G034600--Sobic001G473600 Sobic003G355000 Sobic003G355000 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic002G034600--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic010G236400--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic002G071500 Sobic002G071500 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100 Sobic002G297200 Sobic002G297200 Sobic003G397800--Sobic002G297200 Sobic003G397800--Sobic001G409600 Sobic002G353600 Sobic002G353600 Sobic003G397800--Sobic002G353600 Sobic007G167500 Sobic007G167500 Sobic003G397800--Sobic007G167500 Sobic003G445400 Sobic003G445400 Sobic003G397800--Sobic003G445400 Sobic001G206100 Sobic001G206100 Sobic003G397800--Sobic001G206100 Sobic007G185900 Sobic007G185900 Sobic003G397800--Sobic007G185900 Sobic010G101800 Sobic010G101800 Sobic003G397800--Sobic010G101800 Sobic008G054500 Sobic008G054500 Sobic003G397800--Sobic008G054500 Sobic001G409600--Sobic003G397800 Sobic001G409600--Sobic010G101800 Sobic001G409600--Sobic002G297200 Sobic001G109800 Sobic001G109800 Sobic001G409600--Sobic001G109800 Sobic001G125200 Sobic001G125200 Sobic001G409600--Sobic001G125200 Sobic007G096000 Sobic007G096000 Sobic001G409600--Sobic007G096000 Sobic009G249200 Sobic009G249200 Sobic001G409600--Sobic009G249200 Sobic003G187400 Sobic003G187400 Sobic001G409600--Sobic003G187400 Sobic001G409600--Sobic001G016000 Sobic004G057400 Sobic004G057400 Sobic004G205600--Sobic004G057400 Sobic001G497300 Sobic001G497300 Sobic004G205600--Sobic001G497300 Sobic001G090400 Sobic001G090400 Sobic004G205600--Sobic001G090400 Sobic004G205600--Sobic003G081000 Sobic007G026300 Sobic007G026300 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic002G157000 Sobic002G157000 Sobic004G205600--Sobic002G157000 Sobic008G047800 Sobic008G047800 Sobic004G274200--Sobic008G047800 Sobic004G274200--Sobic010G236400 Sobic004G146500 Sobic004G146500 Sobic004G274200--Sobic004G146500 Sobic004G021100 Sobic004G021100 Sobic004G274200--Sobic004G021100 Sobic008G112800 Sobic008G112800 Sobic004G274200--Sobic008G112800 Sobic003G352200 Sobic003G352200 Sobic004G274200--Sobic003G352200 Sobic009G044800 Sobic009G044800 Sobic004G274200--Sobic009G044800 Sobic004G274200--Sobic002G071500 Sobic001G114000 Sobic001G114000 Sobic004G274200--Sobic001G114000 Sobic002G283600--Sobic001G016000 Sobic002G283600--Sobic002G034600 Sobic002G283600--Sobic010G101800 Sobic002G283600--Sobic002G264200 Sobic010G053800 Sobic010G053800 Sobic002G283600--Sobic010G053800 Sobic002G283600--Sobic001G409600 Sobic002G283600--Sobic007G119200 Sobic002G283600--Sobic003G397800 Sobic002G310200 Sobic002G310200 Sobic002G283600--Sobic002G310200 Sobic007G119200--Sobic002G034600 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic007G119200--Sobic002G264200 Sobic001G088100 Sobic001G088100 Sobic007G119200--Sobic001G088100 Sobic006G173100--Sobic001G090400 Sobic006G173100--Sobic002G157300 Sobic006G173100--Sobic003G187400 Sobic002G197100 Sobic002G197100 Sobic006G173100--Sobic002G197100 Sobic006G173100--Sobic004G021100 Sobic006G032400 Sobic006G032400 Sobic006G173100--Sobic006G032400 Sobic001G512700 Sobic001G512700 Sobic006G173100--Sobic001G512700 Sobic004G067700 Sobic004G067700 Sobic006G173100--Sobic004G067700 Sobic002G370900 Sobic002G370900 Sobic006G173100--Sobic002G370900
Octagon: transcription factors


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