Gene annotation
Transcriptome id Sobic.002G034600.1,Sobic.002G034600.2
Synonym Sb02g003020, ILP1, ATILP1
Functional annotation zinc ion binding protein, putative, expressed
UniProt A0A1B6Q908 , A0A1B6Q901
Pfam PF07967
Panther DB PTHR15835 PTHR15835:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT1G17210 : IAP-like protein 1
RAP-DB (Rice) LOC_Os07g05610.1 : zinc ion binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a016163 , Zm00025a045014
Brachypodium KQK12864 , KQK12865 , KQK21051 , KQK21050
Barley HORVU2Hr1G060380.9 , HORVU2Hr1G060380.1 , HORVU2Hr1G060380.3 , HORVU2Hr1G060380.2 , HORVU2Hr1G060380.5 , HORVU2Hr1G060380.7 , HORVU2Hr1G060380.6 , HORVU2Hr1G060380.10 , HORVU2Hr1G060380.8 , HORVU2Hr1G060380.4
Wheat TraesCS2A02G251900 , TraesCS2A02G251900 , TraesCS2A02G251900 , TraesCS2B02G271800 , TraesCS2D02G252700
Populus PNT12373 , PNT12377 , PNT12376 , PNT12375 , PNT12374


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G198100 expressed protein -
2 Sobic.007G119200 intracellular protein transport protein USO1-related, putative, expressed -
3 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
4 Sobic.001G473600 ZOS5-06 - C2H2 zinc finger protein, expressed -
5 Sobic.003G355000 Transcription initiation factor TFIID subunit A containing protein, expressed K03126: transcription initiation factor TFIID subunit 12
6 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
7 Sobic.002G264200 RNA recognition motif containing protein, expressed -
8 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2
9 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
10 Sobic.003G352200 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.004G146500 ataxin-2 related protein, putative, expressed -
12 Sobic.001G016000 expressed protein K07759: poly(ADP-ribose) glycohydrolase
13 Sobic.001G395100 - K12835: DDX42, ATP-dependent RNA helicase DDX42
14 Sobic.002G297200 ZOS9-19 - C2H2 zinc finger protein, expressed -
15 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
16 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
17 Sobic.001G497900 XS domain containing protein, expressed -
18 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
19 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
20 Sobic.006G252700 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic002G034600 Sobic002G034600 Sobic009G198100 Sobic009G198100 Sobic002G034600--Sobic009G198100 Sobic007G119200 Sobic007G119200 Sobic002G034600--Sobic007G119200 Sobic003G081000 Sobic003G081000 Sobic002G034600--Sobic003G081000 Sobic001G473600 Sobic001G473600 Sobic002G034600--Sobic001G473600 Sobic003G355000 Sobic003G355000 Sobic002G034600--Sobic003G355000 Sobic007G118200 Sobic007G118200 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic010G236400 Sobic010G236400 Sobic002G034600--Sobic010G236400 Sobic009G198100--Sobic007G118200 Sobic009G198100--Sobic002G034600 Sobic010G033400 Sobic010G033400 Sobic009G198100--Sobic010G033400 Sobic009G198100--Sobic003G355000 Sobic009G198100--Sobic003G081000 Sobic008G174300 Sobic008G174300 Sobic009G198100--Sobic008G174300 Sobic001G131800 Sobic001G131800 Sobic009G198100--Sobic001G131800 Sobic003G359300 Sobic003G359300 Sobic009G198100--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic009G198100--Sobic007G205000 Sobic007G119200--Sobic002G034600 Sobic004G146500 Sobic004G146500 Sobic007G119200--Sobic004G146500 Sobic008G153000 Sobic008G153000 Sobic007G119200--Sobic008G153000 Sobic001G109800 Sobic001G109800 Sobic007G119200--Sobic001G109800 Sobic007G041500 Sobic007G041500 Sobic007G119200--Sobic007G041500 Sobic010G069100 Sobic010G069100 Sobic007G119200--Sobic010G069100 Sobic007G218000 Sobic007G218000 Sobic007G119200--Sobic007G218000 Sobic007G119200--Sobic002G264200 Sobic001G088100 Sobic001G088100 Sobic007G119200--Sobic001G088100 Sobic003G081000--Sobic007G118200 Sobic003G081000--Sobic008G174300 Sobic003G081000--Sobic002G034600 Sobic004G205600 Sobic004G205600 Sobic003G081000--Sobic004G205600 Sobic003G081000--Sobic009G198100 Sobic006G252700 Sobic006G252700 Sobic003G081000--Sobic006G252700 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100 Sobic001G473600--Sobic002G034600 Sobic003G352200 Sobic003G352200 Sobic001G473600--Sobic003G352200 Sobic007G046200 Sobic007G046200 Sobic001G473600--Sobic007G046200 Sobic001G395100 Sobic001G395100 Sobic001G473600--Sobic001G395100 Sobic004G353000 Sobic004G353000 Sobic001G473600--Sobic004G353000 Sobic007G084100 Sobic007G084100 Sobic001G473600--Sobic007G084100 Sobic001G473600--Sobic001G088100 Sobic007G041300 Sobic007G041300 Sobic001G473600--Sobic007G041300 Sobic007G075900 Sobic007G075900 Sobic001G473600--Sobic007G075900 Sobic003G355000--Sobic009G198100 Sobic003G355000--Sobic002G034600 Sobic002G045400 Sobic002G045400 Sobic003G355000--Sobic002G045400 Sobic003G433500 Sobic003G433500 Sobic003G355000--Sobic003G433500 Sobic003G355000--Sobic008G174300 Sobic001G517500 Sobic001G517500 Sobic003G355000--Sobic001G517500 Sobic003G355000--Sobic007G118200 Sobic003G355000--Sobic010G033400 Sobic001G497900 Sobic001G497900 Sobic003G355000--Sobic001G497900 Sobic007G118200--Sobic010G033400 Sobic007G118200--Sobic003G081000 Sobic007G118200--Sobic004G350100 Sobic007G118200--Sobic009G198100 Sobic007G118200--Sobic008G174300 Sobic007G118200--Sobic002G034600 Sobic007G118200--Sobic006G252700 Sobic001G028400 Sobic001G028400 Sobic007G118200--Sobic001G028400 Sobic001G408700 Sobic001G408700 Sobic007G118200--Sobic001G408700 Sobic002G264200--Sobic010G069100 Sobic003G416700 Sobic003G416700 Sobic002G264200--Sobic003G416700 Sobic001G461400 Sobic001G461400 Sobic002G264200--Sobic001G461400 Sobic002G264200--Sobic008G153000 Sobic002G264200--Sobic010G236400 Sobic002G071500 Sobic002G071500 Sobic002G264200--Sobic002G071500 Sobic007G065400 Sobic007G065400 Sobic002G264200--Sobic007G065400 Sobic002G153700 Sobic002G153700 Sobic002G264200--Sobic002G153700 Sobic006G118700 Sobic006G118700 Sobic002G264200--Sobic006G118700 Sobic004G066200 Sobic004G066200 Sobic001G356600--Sobic004G066200 Sobic003G248200 Sobic003G248200 Sobic001G356600--Sobic003G248200 Sobic001G356600--Sobic002G034600 Sobic001G512700 Sobic001G512700 Sobic001G356600--Sobic001G512700 Sobic009G228700 Sobic009G228700 Sobic001G356600--Sobic009G228700 Sobic009G179700 Sobic009G179700 Sobic001G356600--Sobic009G179700 Sobic010G018700 Sobic010G018700 Sobic001G356600--Sobic010G018700 Sobic008G179700 Sobic008G179700 Sobic001G356600--Sobic008G179700 Sobic004G274200 Sobic004G274200 Sobic001G356600--Sobic004G274200 Sobic004G084300 Sobic004G084300 Sobic010G236400--Sobic004G084300 Sobic010G236400--Sobic002G264200 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic010G236400--Sobic002G071500 Sobic003G401100 Sobic003G401100 Sobic010G236400--Sobic003G401100
Octagon: transcription factors


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