Gene annotation
Transcriptome id Sobic.006G252700.2,Sobic.006G252700.4,Sobic.006G252700.5,Sobic.006G252700.3
Synonym Sb06g031750
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6PNU8
Pfam PF14531
Panther DB PTHR23257 PTHR23257:SF521
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G50180 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g38080.1,LOC_Os02g38080.2 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a031820
Brachypodium KQK00146 , KQK00147
Barley HORVU6Hr1G053310.1 , HORVU6Hr1G053310.2 , HORVU6Hr1G053310.3 , HORVU6Hr1G053310.4
Wheat TraesCS6B02G237600 , TraesCS6B02G237600 , TraesCS6A02G208500 , TraesCS6D02G192100
Populus -


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cDNA sequences
Sobic.006G252700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
2 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
3 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
4 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
5 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
6 Sobic.006G278700 expressed protein -
7 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
8 Sobic.003G439800 growth inhibition and differentiation-related protein 88, putative, expressed -
9 Sobic.002G034600 zinc ion binding protein, putative, expressed -
10 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
11 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
12 Sobic.003G114700 NAK-like ser/thr protein kinase, putative, expressed -
13 Sobic.006G267300 expressed protein -
14 Sobic.001G360200 novel plant SNARE 11, putative, expressed K08494: novel plant SNARE
15 Sobic.002G300700 peptidyl-prolyl cis-trans isomerase, putative, expressed -
16 Sobic.009G198100 expressed protein -
17 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
18 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
19 Sobic.002G126500 RNA recognition motif containing protein, expressed -
20 Sobic.001G356600 KH domain-containing protein, putative, expressed K13162: poly(rC)-binding protein 2


Gene co-expression network
sample Sobic006G252700 Sobic006G252700 Sobic003G081000 Sobic003G081000 Sobic006G252700--Sobic003G081000 Sobic001G466700 Sobic001G466700 Sobic006G252700--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic006G252700--Sobic004G350100 Sobic001G143500 Sobic001G143500 Sobic006G252700--Sobic001G143500 Sobic007G118200 Sobic007G118200 Sobic006G252700--Sobic007G118200 Sobic006G278700 Sobic006G278700 Sobic006G252700--Sobic006G278700 Sobic003G401100 Sobic003G401100 Sobic006G252700--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic006G252700--Sobic003G439800 Sobic002G034600 Sobic002G034600 Sobic006G252700--Sobic002G034600 Sobic003G081000--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic003G081000--Sobic008G174300 Sobic003G081000--Sobic002G034600 Sobic004G205600 Sobic004G205600 Sobic003G081000--Sobic004G205600 Sobic009G198100 Sobic009G198100 Sobic003G081000--Sobic009G198100 Sobic003G081000--Sobic006G252700 Sobic010G033400 Sobic010G033400 Sobic003G081000--Sobic010G033400 Sobic003G081000--Sobic001G466700 Sobic003G081000--Sobic004G350100 Sobic001G466700--Sobic006G252700 Sobic001G466700--Sobic003G081000 Sobic001G466700--Sobic001G143500 Sobic002G388200 Sobic002G388200 Sobic001G466700--Sobic002G388200 Sobic001G371200 Sobic001G371200 Sobic001G466700--Sobic001G371200 Sobic004G021100 Sobic004G021100 Sobic001G466700--Sobic004G021100 Sobic007G119200 Sobic007G119200 Sobic001G466700--Sobic007G119200 Sobic009G056800 Sobic009G056800 Sobic001G466700--Sobic009G056800 Sobic001G466700--Sobic007G118200 Sobic004G350100--Sobic007G118200 Sobic004G350100--Sobic010G033400 Sobic004G350100--Sobic006G252700 Sobic004G350100--Sobic003G081000 Sobic004G007300 Sobic004G007300 Sobic004G350100--Sobic004G007300 Sobic004G350100--Sobic009G056800 Sobic004G283000 Sobic004G283000 Sobic004G350100--Sobic004G283000 Sobic004G350100--Sobic001G143500 Sobic001G028400 Sobic001G028400 Sobic004G350100--Sobic001G028400 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic001G143500--Sobic004G350100 Sobic001G143500--Sobic003G401100 Sobic001G143500--Sobic003G439800 Sobic001G143500--Sobic001G466700 Sobic001G143500--Sobic006G278700 Sobic006G267300 Sobic006G267300 Sobic001G143500--Sobic006G267300 Sobic007G118200--Sobic010G033400 Sobic007G118200--Sobic003G081000 Sobic007G118200--Sobic004G350100 Sobic007G118200--Sobic009G198100 Sobic007G118200--Sobic008G174300 Sobic007G118200--Sobic002G034600 Sobic007G118200--Sobic006G252700 Sobic007G118200--Sobic001G028400 Sobic001G408700 Sobic001G408700 Sobic007G118200--Sobic001G408700 Sobic002G378200 Sobic002G378200 Sobic006G278700--Sobic002G378200 Sobic006G278700--Sobic006G252700 Sobic007G205000 Sobic007G205000 Sobic006G278700--Sobic007G205000 Sobic001G360200 Sobic001G360200 Sobic006G278700--Sobic001G360200 Sobic006G278700--Sobic003G401100 Sobic006G278700--Sobic001G143500 Sobic001G226000 Sobic001G226000 Sobic006G278700--Sobic001G226000 Sobic006G278700--Sobic007G118200 Sobic008G004400 Sobic008G004400 Sobic006G278700--Sobic008G004400 Sobic010G236400 Sobic010G236400 Sobic003G401100--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic003G401100--Sobic004G084300 Sobic001G281600 Sobic001G281600 Sobic003G401100--Sobic001G281600 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic003G439800--Sobic001G143500 Sobic003G439800--Sobic006G252700 Sobic003G439800--Sobic006G278700 Sobic010G018700 Sobic010G018700 Sobic003G439800--Sobic010G018700 Sobic002G268400 Sobic002G268400 Sobic003G439800--Sobic002G268400 Sobic001G142100 Sobic001G142100 Sobic003G439800--Sobic001G142100 Sobic009G058500 Sobic009G058500 Sobic003G439800--Sobic009G058500 Sobic003G439800--Sobic003G401100 Sobic010G279700 Sobic010G279700 Sobic003G439800--Sobic010G279700 Sobic002G034600--Sobic009G198100 Sobic002G034600--Sobic007G119200 Sobic002G034600--Sobic003G081000 Sobic001G473600 Sobic001G473600 Sobic002G034600--Sobic001G473600 Sobic003G355000 Sobic003G355000 Sobic002G034600--Sobic003G355000 Sobic002G034600--Sobic007G118200 Sobic002G264200 Sobic002G264200 Sobic002G034600--Sobic002G264200 Sobic001G356600 Sobic001G356600 Sobic002G034600--Sobic001G356600 Sobic002G034600--Sobic010G236400
Octagon: transcription factors


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