Gene annotation
Transcriptome id Sobic.009G257800.1
Synonym ATHCX1, CAX3, ATCAX3, CAX1-LIKE
Functional annotation sodium/calcium exchanger protein, putative, expressed
UniProt A0A1B6PAL9
Pfam PF01699
Panther DB PTHR31503 PTHR31503:SF12
NCBI CDD KOG1397; Ca2+/H+ antiporter VCX1 and related proteins
KEGG Orthology K07300; chaA, Ca2+:H+ antiporter
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT2G38170 : cation exchanger 1
RAP-DB (Rice) LOC_Os05g51610.1 : sodium/calcium exchanger protein, putative, expressed
MaizeGDB (Corn) Zm00025a036818
Brachypodium KQJ84334
Barley -
Wheat TraesCS2B02G465600 , TraesCS2B02G465600 , TraesCS2A02G444600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
2 Sobic.006G267300 expressed protein -
3 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
4 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
5 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
6 Sobic.002G090800 expressed protein -
7 Sobic.006G252700 protein kinase domain containing protein, expressed -
8 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
9 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
10 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
11 Sobic.006G278700 expressed protein -
12 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
13 Sobic.008G083000 ZOS12-03 - C2H2 zinc finger protein, expressed -
14 Sobic.001G466700 peptidyl-prolyl cis-trans isomerase, putative, expressed K10598: PPIL2, CYC4, peptidyl-prolyl cis-trans isomerase-like 2
15 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
16 Sobic.004G205600 bromodomain domain containing protein, expressed -
17 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
18 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
19 Sobic.001G371200 SAC3/GANP family protein, putative, expressed -
20 Sobic.004G345700 TBC domain containing protein, expressed -


Gene co-expression network
sample Sobic009G257800 Sobic009G257800 Sobic003G401000 Sobic003G401000 Sobic009G257800--Sobic003G401000 Sobic006G267300 Sobic006G267300 Sobic009G257800--Sobic006G267300 Sobic003G081000 Sobic003G081000 Sobic009G257800--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic009G257800--Sobic004G283000 Sobic004G057400 Sobic004G057400 Sobic009G257800--Sobic004G057400 Sobic002G090800 Sobic002G090800 Sobic009G257800--Sobic002G090800 Sobic006G252700 Sobic006G252700 Sobic009G257800--Sobic006G252700 Sobic004G325400 Sobic004G325400 Sobic009G257800--Sobic004G325400 Sobic001G090400 Sobic001G090400 Sobic009G257800--Sobic001G090400 Sobic002G158700 Sobic002G158700 Sobic003G401000--Sobic002G158700 Sobic003G187400 Sobic003G187400 Sobic003G401000--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic003G401000--Sobic002G157300 Sobic003G401000--Sobic009G257800 Sobic001G155000 Sobic001G155000 Sobic003G401000--Sobic001G155000 Sobic009G040700 Sobic009G040700 Sobic003G401000--Sobic009G040700 Sobic001G094000 Sobic001G094000 Sobic003G401000--Sobic001G094000 Sobic006G028200 Sobic006G028200 Sobic003G401000--Sobic006G028200 Sobic003G008500 Sobic003G008500 Sobic003G401000--Sobic003G008500 Sobic007G111100 Sobic007G111100 Sobic006G267300--Sobic007G111100 Sobic006G267300--Sobic009G257800 Sobic003G205501 Sobic003G205501 Sobic006G267300--Sobic003G205501 Sobic001G408700 Sobic001G408700 Sobic006G267300--Sobic001G408700 Sobic009G195200 Sobic009G195200 Sobic006G267300--Sobic009G195200 Sobic007G118200 Sobic007G118200 Sobic006G267300--Sobic007G118200 Sobic010G202600 Sobic010G202600 Sobic006G267300--Sobic010G202600 Sobic003G433500 Sobic003G433500 Sobic006G267300--Sobic003G433500 Sobic008G127400 Sobic008G127400 Sobic006G267300--Sobic008G127400 Sobic003G081000--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic003G081000--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic003G081000--Sobic002G034600 Sobic004G205600 Sobic004G205600 Sobic003G081000--Sobic004G205600 Sobic009G198100 Sobic009G198100 Sobic003G081000--Sobic009G198100 Sobic003G081000--Sobic006G252700 Sobic010G033400 Sobic010G033400 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100 Sobic003G248500 Sobic003G248500 Sobic004G283000--Sobic003G248500 Sobic002G388200 Sobic002G388200 Sobic004G283000--Sobic002G388200 Sobic004G007300 Sobic004G007300 Sobic004G283000--Sobic004G007300 Sobic004G283000--Sobic004G350100 Sobic004G283000--Sobic008G174300 Sobic004G283000--Sobic007G118200 Sobic004G283000--Sobic009G257800 Sobic006G173100 Sobic006G173100 Sobic004G283000--Sobic006G173100 Sobic004G283000--Sobic002G157300 Sobic004G057400--Sobic001G090400 Sobic004G057400--Sobic004G205600 Sobic004G057400--Sobic002G157300 Sobic009G000500 Sobic009G000500 Sobic004G057400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic004G057400--Sobic008G067600 Sobic006G128900 Sobic006G128900 Sobic004G057400--Sobic006G128900 Sobic007G011400 Sobic007G011400 Sobic004G057400--Sobic007G011400 Sobic004G031700 Sobic004G031700 Sobic004G057400--Sobic004G031700 Sobic007G205800 Sobic007G205800 Sobic004G057400--Sobic007G205800 Sobic002G090800--Sobic004G057400 Sobic002G090800--Sobic009G257800 Sobic002G090800--Sobic003G081000 Sobic002G090800--Sobic004G205600 Sobic004G345700 Sobic004G345700 Sobic002G090800--Sobic004G345700 Sobic002G090800--Sobic009G198100 Sobic004G240800 Sobic004G240800 Sobic002G090800--Sobic004G240800 Sobic002G090800--Sobic010G033400 Sobic002G090800--Sobic007G205800 Sobic006G252700--Sobic003G081000 Sobic006G252700--Sobic001G466700 Sobic006G252700--Sobic004G350100 Sobic001G143500 Sobic001G143500 Sobic006G252700--Sobic001G143500 Sobic006G252700--Sobic007G118200 Sobic006G278700 Sobic006G278700 Sobic006G252700--Sobic006G278700 Sobic003G401100 Sobic003G401100 Sobic006G252700--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic006G252700--Sobic003G439800 Sobic006G252700--Sobic002G034600 Sobic004G325400--Sobic009G257800 Sobic007G027700 Sobic007G027700 Sobic004G325400--Sobic007G027700 Sobic007G009400 Sobic007G009400 Sobic004G325400--Sobic007G009400 Sobic004G325400--Sobic003G401100 Sobic004G325400--Sobic001G143500 Sobic004G021200 Sobic004G021200 Sobic004G325400--Sobic004G021200 Sobic004G325400--Sobic003G401000 Sobic004G072100 Sobic004G072100 Sobic004G325400--Sobic004G072100 Sobic004G325400--Sobic008G127400 Sobic001G090400--Sobic008G067600 Sobic001G090400--Sobic006G173100 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic002G320500 Sobic002G320500 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic001G090400--Sobic002G157300 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400
Octagon: transcription factors


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