Gene annotation
Transcriptome id Sobic.002G090800.1,Sobic.002G090800.2
Synonym Sb02g007530
Functional annotation expressed protein
UniProt A0A1B6QA14 , A0A1B6QA28
Pfam PF05623
Panther DB PTHR31343 PTHR31343:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G15030 : Protein of unknown function (DUF789)
RAP-DB (Rice) LOC_Os07g14310.1 : expressed protein
MaizeGDB (Corn) Zm00025a045505 , Zm00025a008926 , Zm00025a013608
Brachypodium KQK20259
Barley HORVU5Hr1G116340.4 , HORVU5Hr1G116340.5 , HORVU5Hr1G116340.6 , HORVU5Hr1G116340.7 , HORVU5Hr1G116340.1 , HORVU5Hr1G116340.2 , HORVU5Hr1G116340.3
Wheat TraesCS5D02G508900 , TraesCS5D02G508900 , TraesCS5D02G508900 , TraesCS4A02G364600 , TraesCS4A02G364600 , TraesCS5B02G508900 , TraesCS5B02G508900 , TraesCS5B02G508900 , TraesCS5B02G508900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
2 Sobic.009G257800 sodium/calcium exchanger protein, putative, expressed K07300: chaA, Ca2+:H+ antiporter
3 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
4 Sobic.004G205600 bromodomain domain containing protein, expressed -
5 Sobic.004G345700 TBC domain containing protein, expressed -
6 Sobic.009G198100 expressed protein -
7 Sobic.004G240800 protein kinase domain containing protein, expressed -
8 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
9 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
10 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
11 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
12 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
13 Sobic.001G119300 mRNA cap guanine-N7 methyltransferase 1, putative, expressed K00565: mRNA (guanine-N7-)-methyltransferase
14 Sobic.007G011400 armadillo/beta-catenin repeat family protein, putative, expressed -
15 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
16 Sobic.002G186000 CD2-binding protein-related, putative, expressed K13099: CD2BP2, CD2 antigen cytoplasmic tail-binding protein 2
17 Sobic.005G084100 Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(PubMedID : 31721651)@inactive receptor kinase At1g27190 precursor, putative, expressed -
18 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
19 Sobic.004G326400 ankyrin repeat-rich protein, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
20 Sobic.002G010300 photoperiodic flowering time gene(PubMedID : 22394582)@casein kinase II subunit alpha-2, putative, expressed K03097: casein kinase II subunit alpha


Gene co-expression network
sample Sobic002G090800 Sobic002G090800 Sobic004G057400 Sobic004G057400 Sobic002G090800--Sobic004G057400 Sobic009G257800 Sobic009G257800 Sobic002G090800--Sobic009G257800 Sobic003G081000 Sobic003G081000 Sobic002G090800--Sobic003G081000 Sobic004G205600 Sobic004G205600 Sobic002G090800--Sobic004G205600 Sobic004G345700 Sobic004G345700 Sobic002G090800--Sobic004G345700 Sobic009G198100 Sobic009G198100 Sobic002G090800--Sobic009G198100 Sobic004G240800 Sobic004G240800 Sobic002G090800--Sobic004G240800 Sobic010G033400 Sobic010G033400 Sobic002G090800--Sobic010G033400 Sobic007G205800 Sobic007G205800 Sobic002G090800--Sobic007G205800 Sobic001G090400 Sobic001G090400 Sobic004G057400--Sobic001G090400 Sobic004G057400--Sobic004G205600 Sobic002G157300 Sobic002G157300 Sobic004G057400--Sobic002G157300 Sobic009G000500 Sobic009G000500 Sobic004G057400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic004G057400--Sobic008G067600 Sobic006G128900 Sobic006G128900 Sobic004G057400--Sobic006G128900 Sobic007G011400 Sobic007G011400 Sobic004G057400--Sobic007G011400 Sobic004G031700 Sobic004G031700 Sobic004G057400--Sobic004G031700 Sobic004G057400--Sobic007G205800 Sobic003G401000 Sobic003G401000 Sobic009G257800--Sobic003G401000 Sobic006G267300 Sobic006G267300 Sobic009G257800--Sobic006G267300 Sobic009G257800--Sobic003G081000 Sobic004G283000 Sobic004G283000 Sobic009G257800--Sobic004G283000 Sobic009G257800--Sobic004G057400 Sobic009G257800--Sobic002G090800 Sobic006G252700 Sobic006G252700 Sobic009G257800--Sobic006G252700 Sobic004G325400 Sobic004G325400 Sobic009G257800--Sobic004G325400 Sobic009G257800--Sobic001G090400 Sobic007G118200 Sobic007G118200 Sobic003G081000--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic003G081000--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic003G081000--Sobic002G034600 Sobic003G081000--Sobic004G205600 Sobic003G081000--Sobic009G198100 Sobic003G081000--Sobic006G252700 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100 Sobic004G205600--Sobic004G057400 Sobic001G497300 Sobic001G497300 Sobic004G205600--Sobic001G497300 Sobic004G205600--Sobic001G090400 Sobic004G205600--Sobic003G081000 Sobic007G026300 Sobic007G026300 Sobic004G205600--Sobic007G026300 Sobic004G205600--Sobic009G000500 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic002G157000 Sobic002G157000 Sobic004G205600--Sobic002G157000 Sobic002G197100 Sobic002G197100 Sobic004G345700--Sobic002G197100 Sobic001G514000 Sobic001G514000 Sobic004G345700--Sobic001G514000 Sobic004G007300 Sobic004G007300 Sobic004G345700--Sobic004G007300 Sobic001G408700 Sobic001G408700 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic006G092800 Sobic006G092800 Sobic004G345700--Sobic006G092800 Sobic003G205501 Sobic003G205501 Sobic004G345700--Sobic003G205501 Sobic010G245000 Sobic010G245000 Sobic004G345700--Sobic010G245000 Sobic009G198100--Sobic007G118200 Sobic009G198100--Sobic002G034600 Sobic009G198100--Sobic010G033400 Sobic003G355000 Sobic003G355000 Sobic009G198100--Sobic003G355000 Sobic009G198100--Sobic003G081000 Sobic009G198100--Sobic008G174300 Sobic001G131800 Sobic001G131800 Sobic009G198100--Sobic001G131800 Sobic003G359300 Sobic003G359300 Sobic009G198100--Sobic003G359300 Sobic007G205000 Sobic007G205000 Sobic009G198100--Sobic007G205000 Sobic001G413500 Sobic001G413500 Sobic004G240800--Sobic001G413500 Sobic009G083900 Sobic009G083900 Sobic004G240800--Sobic009G083900 Sobic004G240800--Sobic001G497300 Sobic002G133400 Sobic002G133400 Sobic004G240800--Sobic002G133400 Sobic005G023900 Sobic005G023900 Sobic004G240800--Sobic005G023900 Sobic004G145500 Sobic004G145500 Sobic004G240800--Sobic004G145500 Sobic004G240800--Sobic002G090800 Sobic004G240800--Sobic004G057400 Sobic004G240800--Sobic002G157000 Sobic010G033400--Sobic007G118200 Sobic010G033400--Sobic008G174300 Sobic010G033400--Sobic009G198100 Sobic010G033400--Sobic004G350100 Sobic001G028400 Sobic001G028400 Sobic010G033400--Sobic001G028400 Sobic010G260500 Sobic010G260500 Sobic010G033400--Sobic010G260500 Sobic010G033400--Sobic003G359300 Sobic010G033400--Sobic003G081000 Sobic010G033400--Sobic001G131800 Sobic007G205800--Sobic007G011400 Sobic009G087800 Sobic009G087800 Sobic007G205800--Sobic009G087800 Sobic010G263800 Sobic010G263800 Sobic007G205800--Sobic010G263800 Sobic008G034600 Sobic008G034600 Sobic007G205800--Sobic008G034600 Sobic004G271900 Sobic004G271900 Sobic007G205800--Sobic004G271900 Sobic009G022200 Sobic009G022200 Sobic007G205800--Sobic009G022200 Sobic003G093600 Sobic003G093600 Sobic007G205800--Sobic003G093600 Sobic003G258400 Sobic003G258400 Sobic007G205800--Sobic003G258400 Sobic002G077200 Sobic002G077200 Sobic007G205800--Sobic002G077200
Octagon: transcription factors


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