Gene annotation
Transcriptome id Sobic.004G240800.1
Synonym Sb04g028160
Functional annotation protein kinase domain containing protein, expressed
UniProt C5XYV4
Pfam PF14381 PF07714
Panther DB PTHR23257 PTHR23257:SF381
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G18160 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os02g50970.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049451 , Zm00025a022021
Brachypodium KQK01959
Barley HORVU7Hr1G038650.5 , HORVU7Hr1G038650.4 , HORVU7Hr1G038650.3 , HORVU7Hr1G038650.2 , HORVU7Hr1G038650.1 , HORVU6Hr1G076070.1 , HORVU6Hr1G076070.2 , HORVU6Hr1G076070.3 , HORVU6Hr1G076070.4 , HORVU6Hr1G076070.5 , HORVU6Hr1G076070.6 , HORVU6Hr1G076070.7 , HORVU6Hr1G076070.8
Wheat TraesCS7A02G190300 , TraesCS6B02G337200 , TraesCS6B02G337200 , TraesCS7B02G095300 , TraesCS7B02G095300 , TraesCS7B02G095300 , TraesCS6D02G287700 , TraesCS6D02G287700 , TraesCS6A02G308500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G413500 expressed protein -
2 Sobic.009G083900 C-5 cytosine-specific DNA methylase, putative, expressed K00558: DNMT1, DNA (cytosine-5)-methyltransferase 1
3 Sobic.001G497300 protein kinase domain containing protein, expressed -
4 Sobic.002G133400 CTR1-like protein kinase, putative, expressed K14510: serine/threonine-protein kinase CTR1
5 Sobic.005G023900 expressed protein -
6 Sobic.004G145500 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
7 Sobic.002G090800 expressed protein -
8 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
9 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
10 Sobic.006G237400 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
11 Sobic.004G205600 bromodomain domain containing protein, expressed -
12 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
13 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
14 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
15 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
16 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
17 Sobic.002G248400 ENT domain containing protein, expressed -
18 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
19 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
20 Sobic.009G005500 expressed protein -


Gene co-expression network
sample Sobic004G240800 Sobic004G240800 Sobic001G413500 Sobic001G413500 Sobic004G240800--Sobic001G413500 Sobic009G083900 Sobic009G083900 Sobic004G240800--Sobic009G083900 Sobic001G497300 Sobic001G497300 Sobic004G240800--Sobic001G497300 Sobic002G133400 Sobic002G133400 Sobic004G240800--Sobic002G133400 Sobic005G023900 Sobic005G023900 Sobic004G240800--Sobic005G023900 Sobic004G145500 Sobic004G145500 Sobic004G240800--Sobic004G145500 Sobic002G090800 Sobic002G090800 Sobic004G240800--Sobic002G090800 Sobic004G057400 Sobic004G057400 Sobic004G240800--Sobic004G057400 Sobic002G157000 Sobic002G157000 Sobic004G240800--Sobic002G157000 Sobic001G413500--Sobic009G083900 Sobic008G173900 Sobic008G173900 Sobic001G413500--Sobic008G173900 Sobic001G413500--Sobic002G157000 Sobic001G413500--Sobic004G240800 Sobic001G413500--Sobic001G497300 Sobic001G413500--Sobic005G023900 Sobic003G200200 Sobic003G200200 Sobic001G413500--Sobic003G200200 Sobic001G413500--Sobic004G145500 Sobic003G268300 Sobic003G268300 Sobic001G413500--Sobic003G268300 Sobic009G083900--Sobic001G413500 Sobic009G083900--Sobic004G240800 Sobic009G083900--Sobic001G497300 Sobic007G185900 Sobic007G185900 Sobic009G083900--Sobic007G185900 Sobic009G000500 Sobic009G000500 Sobic009G083900--Sobic009G000500 Sobic004G196700 Sobic004G196700 Sobic009G083900--Sobic004G196700 Sobic009G083900--Sobic004G145500 Sobic008G054500 Sobic008G054500 Sobic009G083900--Sobic008G054500 Sobic005G045300 Sobic005G045300 Sobic009G083900--Sobic005G045300 Sobic007G104800 Sobic007G104800 Sobic001G497300--Sobic007G104800 Sobic001G512700 Sobic001G512700 Sobic001G497300--Sobic001G512700 Sobic002G006900 Sobic002G006900 Sobic001G497300--Sobic002G006900 Sobic006G237400 Sobic006G237400 Sobic001G497300--Sobic006G237400 Sobic004G205600 Sobic004G205600 Sobic001G497300--Sobic004G205600 Sobic001G497300--Sobic001G413500 Sobic008G047800 Sobic008G047800 Sobic001G497300--Sobic008G047800 Sobic001G497300--Sobic005G023900 Sobic001G497300--Sobic002G157000 Sobic006G216800 Sobic006G216800 Sobic002G133400--Sobic006G216800 Sobic002G134200 Sobic002G134200 Sobic002G133400--Sobic002G134200 Sobic002G133400--Sobic002G006900 Sobic002G133400--Sobic008G047800 Sobic007G065400 Sobic007G065400 Sobic002G133400--Sobic007G065400 Sobic002G309600 Sobic002G309600 Sobic002G133400--Sobic002G309600 Sobic010G139000 Sobic010G139000 Sobic002G133400--Sobic010G139000 Sobic001G036050 Sobic001G036050 Sobic002G133400--Sobic001G036050 Sobic006G048500 Sobic006G048500 Sobic002G133400--Sobic006G048500 Sobic005G023900--Sobic002G157000 Sobic005G023900--Sobic003G200200 Sobic005G023900--Sobic001G413500 Sobic005G023900--Sobic001G497300 Sobic005G023900--Sobic002G006900 Sobic001G486300 Sobic001G486300 Sobic005G023900--Sobic001G486300 Sobic005G023900--Sobic003G268300 Sobic005G023900--Sobic007G065400 Sobic009G210500 Sobic009G210500 Sobic005G023900--Sobic009G210500 Sobic004G145500--Sobic007G065400 Sobic004G145500--Sobic008G173900 Sobic002G144933 Sobic002G144933 Sobic004G145500--Sobic002G144933 Sobic008G009700 Sobic008G009700 Sobic004G145500--Sobic008G009700 Sobic001G306900 Sobic001G306900 Sobic004G145500--Sobic001G306900 Sobic004G145500--Sobic003G200200 Sobic004G145500--Sobic009G210500 Sobic010G136600 Sobic010G136600 Sobic004G145500--Sobic010G136600 Sobic001G241200 Sobic001G241200 Sobic004G145500--Sobic001G241200 Sobic002G090800--Sobic004G057400 Sobic009G257800 Sobic009G257800 Sobic002G090800--Sobic009G257800 Sobic003G081000 Sobic003G081000 Sobic002G090800--Sobic003G081000 Sobic002G090800--Sobic004G205600 Sobic004G345700 Sobic004G345700 Sobic002G090800--Sobic004G345700 Sobic009G198100 Sobic009G198100 Sobic002G090800--Sobic009G198100 Sobic002G090800--Sobic004G240800 Sobic010G033400 Sobic010G033400 Sobic002G090800--Sobic010G033400 Sobic007G205800 Sobic007G205800 Sobic002G090800--Sobic007G205800 Sobic001G090400 Sobic001G090400 Sobic004G057400--Sobic001G090400 Sobic004G057400--Sobic004G205600 Sobic002G157300 Sobic002G157300 Sobic004G057400--Sobic002G157300 Sobic004G057400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic004G057400--Sobic008G067600 Sobic006G128900 Sobic006G128900 Sobic004G057400--Sobic006G128900 Sobic007G011400 Sobic007G011400 Sobic004G057400--Sobic007G011400 Sobic004G031700 Sobic004G031700 Sobic004G057400--Sobic004G031700 Sobic004G057400--Sobic007G205800 Sobic002G248400 Sobic002G248400 Sobic002G157000--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic001G094000 Sobic001G094000 Sobic002G157000--Sobic001G094000
Octagon: transcription factors


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