Gene annotation
Transcriptome id Sobic.004G205600.1,Sobic.004G205600.2
Synonym ATBET10, Sb04g025160, BET10
Functional annotation bromodomain domain containing protein, expressed
UniProt A0A194YQV2 , C5XX56
Pfam PF00439
Panther DB PTHR22880 PTHR22880:SF155
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT3G01770 : bromodomain and extraterminal domain protein 9,bromodomain and extraterminal domain protein 10
RAP-DB (Rice) LOC_Os02g38980.1 : bromodomain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a021277
Brachypodium KQK00211 , KQK00212 , PNT68978
Barley HORVU3Hr1G015760.4 , HORVU6Hr1G054560.2 , HORVU6Hr1G054560.3 , HORVU6Hr1G054560.1 , HORVU6Hr1G054560.6 , HORVU6Hr1G054560.7 , HORVU6Hr1G054560.4 , HORVU6Hr1G054560.5 , HORVU3Hr1G015740.1 , HORVU6Hr1G054560.8 , HORVU3Hr1G015740.3 , HORVU3Hr1G015740.4 , HORVU3Hr1G015740.5 , HORVU3Hr1G015740.6 , HORVU3Hr1G015740.2 , HORVU6Hr1G054560.9 , HORVU3Hr1G015760.6 , HORVU3Hr1G015760.5 , HORVU3Hr1G015760.2 , HORVU3Hr1G015760.3 , HORVU3Hr1G015760.1 , HORVU3Hr1G022660.8 , HORVU3Hr1G022660.1 , HORVU3Hr1G022660.3 , HORVU3Hr1G022660.2 , HORVU3Hr1G022660.5 , HORVU3Hr1G022660.4 , HORVU3Hr1G022660.7 , HORVU3Hr1G022660.6 , HORVU6Hr1G054560.10 , HORVU6Hr1G054560.11 , HORVU6Hr1G054560.12 , HORVU6Hr1G054560.13 , HORVU6Hr1G054560.14 , HORVU6Hr1G054560.15 , HORVU6Hr1G054560.16 , HORVU6Hr1G054560.17 , HORVU6Hr1G054560.18 , HORVU6Hr1G054560.19
Wheat TraesCS3B02G141400 , TraesCS3B02G141400 , TraesCS3B02G141400 , TraesCS3B02G141400 , TraesCS3B02G141400 , TraesCS3B02G141400 , TraesCS3B02G141400 , TraesCS3D02G124100 , TraesCS3D02G124100 , TraesCS3D02G124100 , TraesCS3D02G124100 , TraesCS3B02G103200 , TraesCS3B02G103200 , TraesCS3A02G122200 , TraesCS3A02G122200 , TraesCS3A02G122200 , TraesCS3A02G122200 , TraesCS3A02G122200 , TraesCS3A02G122200 , TraesCS3A02G122200 , TraesCS6D02G196600 , TraesCS6D02G196600 , TraesCS3A02G087800 , TraesCS6A02G214000 , TraesCS6A02G214000 , TraesCS6B02G244000 , TraesCS6B02G244000 , TraesCS6B02G244000 , TraesCS6B02G244000 , TraesCS3D02G087900 , TraesCS3D02G087900 , TraesCS3D02G087900 , TraesCS3D02G087900
Populus -


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cDNA sequences
Sobic.004G205600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
2 Sobic.001G497300 protein kinase domain containing protein, expressed -
3 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
4 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
5 Sobic.007G026300 pre-mRNA-splicing factor SLU7, putative, expressed K12819: pre-mRNA-processing factor SLU7
6 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
7 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
8 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
9 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
10 Sobic.007G104800 expressed protein -
11 Sobic.002G248400 ENT domain containing protein, expressed -
12 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
13 Sobic.003G187400 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
14 Sobic.001G107500 cyclin-dependent kinase, putative, expressed K08819: cyclin-dependent kinase 12/13
15 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
16 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
17 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
18 Sobic.003G408500 beclin-1, putative, expressed K08334: BECN, VPS30, beclin
19 Sobic.001G413500 expressed protein -
20 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like


Gene co-expression network
sample Sobic004G205600 Sobic004G205600 Sobic004G057400 Sobic004G057400 Sobic004G205600--Sobic004G057400 Sobic001G497300 Sobic001G497300 Sobic004G205600--Sobic001G497300 Sobic001G090400 Sobic001G090400 Sobic004G205600--Sobic001G090400 Sobic003G081000 Sobic003G081000 Sobic004G205600--Sobic003G081000 Sobic007G026300 Sobic007G026300 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic002G157000 Sobic002G157000 Sobic004G205600--Sobic002G157000 Sobic004G057400--Sobic001G090400 Sobic004G057400--Sobic004G205600 Sobic004G057400--Sobic002G157300 Sobic004G057400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic004G057400--Sobic008G067600 Sobic006G128900 Sobic006G128900 Sobic004G057400--Sobic006G128900 Sobic007G011400 Sobic007G011400 Sobic004G057400--Sobic007G011400 Sobic004G031700 Sobic004G031700 Sobic004G057400--Sobic004G031700 Sobic007G205800 Sobic007G205800 Sobic004G057400--Sobic007G205800 Sobic007G104800 Sobic007G104800 Sobic001G497300--Sobic007G104800 Sobic001G512700 Sobic001G512700 Sobic001G497300--Sobic001G512700 Sobic002G006900 Sobic002G006900 Sobic001G497300--Sobic002G006900 Sobic006G237400 Sobic006G237400 Sobic001G497300--Sobic006G237400 Sobic001G497300--Sobic004G205600 Sobic001G413500 Sobic001G413500 Sobic001G497300--Sobic001G413500 Sobic008G047800 Sobic008G047800 Sobic001G497300--Sobic008G047800 Sobic005G023900 Sobic005G023900 Sobic001G497300--Sobic005G023900 Sobic001G497300--Sobic002G157000 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic002G320500 Sobic002G320500 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic001G090400--Sobic002G157300 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400 Sobic007G118200 Sobic007G118200 Sobic003G081000--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic003G081000--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic003G081000--Sobic002G034600 Sobic003G081000--Sobic004G205600 Sobic009G198100 Sobic009G198100 Sobic003G081000--Sobic009G198100 Sobic006G252700 Sobic006G252700 Sobic003G081000--Sobic006G252700 Sobic010G033400 Sobic010G033400 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100 Sobic004G021100 Sobic004G021100 Sobic007G026300--Sobic004G021100 Sobic007G026300--Sobic004G205600 Sobic007G026300--Sobic001G512700 Sobic007G026300--Sobic007G104800 Sobic004G257400 Sobic004G257400 Sobic007G026300--Sobic004G257400 Sobic007G026300--Sobic001G497300 Sobic007G200600 Sobic007G200600 Sobic007G026300--Sobic007G200600 Sobic007G026300--Sobic001G090400 Sobic007G026300--Sobic004G057400 Sobic009G000500--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic009G000500--Sobic003G445400 Sobic009G000500--Sobic002G320500 Sobic009G000500--Sobic006G128900 Sobic006G133800 Sobic006G133800 Sobic009G000500--Sobic006G133800 Sobic009G000500--Sobic001G090400 Sobic003G307000 Sobic003G307000 Sobic009G000500--Sobic003G307000 Sobic008G173900 Sobic008G173900 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic003G187400 Sobic003G187400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic010G263800 Sobic010G263800 Sobic002G157300--Sobic010G263800 Sobic002G157300--Sobic006G173100 Sobic009G065100--Sobic002G320500 Sobic009G065100--Sobic002G157000 Sobic009G065100--Sobic008G173900 Sobic009G215800 Sobic009G215800 Sobic009G065100--Sobic009G215800 Sobic004G084300 Sobic004G084300 Sobic009G065100--Sobic004G084300 Sobic002G144933 Sobic002G144933 Sobic009G065100--Sobic002G144933 Sobic002G309800 Sobic002G309800 Sobic009G065100--Sobic002G309800 Sobic001G107500 Sobic001G107500 Sobic009G065100--Sobic001G107500 Sobic003G197800 Sobic003G197800 Sobic009G065100--Sobic003G197800 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic003G268300 Sobic003G268300 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000
Octagon: transcription factors


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