Gene annotation
Transcriptome id Sobic.006G128900.1
Synonym Sb06g020890
Functional annotation cyclin-dependent kinase G-2, putative, expressed
UniProt C5YBB5
Pfam PF00069
Panther DB PTHR24056 PTHR24056:SF107
NCBI CDD -
KEGG Orthology K08818; cell division cycle 2-like
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G67580 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os04g41100.3 : cyclin-dependent kinase G-2, putative, expressed
MaizeGDB (Corn) Zm00025a021275 , Zm00025a010920 , Zm00025a056355
Brachypodium KQK00216 , PNT61339 , PNT61338 , PNT61337 , KQJ83258
Barley HORVU6Hr1G054600.6 , HORVU6Hr1G054600.5 , HORVU6Hr1G054600.4 , HORVU6Hr1G054600.3 , HORVU6Hr1G054600.2 , HORVU6Hr1G054600.1 , HORVU2Hr1G084400.1 , HORVU2Hr1G084400.2 , HORVU2Hr1G084400.3 , HORVU2Hr1G084400.4 , HORVU2Hr1G084400.5 , HORVU2Hr1G084400.6 , HORVU2Hr1G084440.21 , HORVU2Hr1G084440.20 , HORVU2Hr1G084440.18 , HORVU2Hr1G084440.19
Wheat TraesCS2D02G345200 , TraesCS2D02G345200 , TraesCS2D02G345200 , TraesCS2D02G345200 , TraesCS2B02G364800 , TraesCS2B02G364800 , TraesCS2B02G364800 , TraesCS2B02G364800 , TraesCS2B02G364800 , TraesCS6A02G214100 , TraesCS6A02G214100 , TraesCS6D02G196700 , TraesCS6D02G196700 , TraesCS2A02G346500 , TraesCS2A02G346500 , TraesCS2A02G346500 , TraesCS2A02G346500 , TraesCS6B02G244100 , TraesCS6B02G244100
Populus PNT25292 , PNT25290 , PNT25291 , PNT14260 , PNT25289


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cDNA sequences
Sobic.006G128900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G209850 - -
2 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
3 Sobic.004G031700 expressed protein -
4 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
5 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
6 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
7 Sobic.003G268300 surp module family protein, putative, expressed -
8 Sobic.001G477800 expressed protein -
9 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
10 Sobic.008G024600 expressed protein -
11 Sobic.002G053000 expressed protein -
12 Sobic.003G422300 recA protein, expressed K03553: recombination protein RecA
13 Sobic.001G464200 flap endonuclease, putative, expressed K10846: ERCC5, XPG, DNA excision repair protein ERCC-5
14 Sobic.003G113200 5-nucleotidase domain-containing protein, putative, expressed -
15 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4
16 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
17 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
18 Sobic.009G040700 "OsPPKL2(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659919)@serine/threonine protein phosphatase, putative, expressed K01090: protein phosphatase
19 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
20 Sobic.005G045300 PX domain containing protein, putative, expressed K17925: sorting nexin-13


Gene co-expression network
sample Sobic006G128900 Sobic006G128900 Sobic006G209850 Sobic006G209850 Sobic006G128900--Sobic006G209850 Sobic001G511500 Sobic001G511500 Sobic006G128900--Sobic001G511500 Sobic004G031700 Sobic004G031700 Sobic006G128900--Sobic004G031700 Sobic009G000500 Sobic009G000500 Sobic006G128900--Sobic009G000500 Sobic001G090400 Sobic001G090400 Sobic006G128900--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic006G128900--Sobic003G445400 Sobic003G268300 Sobic003G268300 Sobic006G128900--Sobic003G268300 Sobic001G477800 Sobic001G477800 Sobic006G128900--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic006G128900--Sobic002G157000 Sobic006G209850--Sobic006G128900 Sobic006G209850--Sobic001G511500 Sobic003G280800 Sobic003G280800 Sobic006G209850--Sobic003G280800 Sobic010G277500 Sobic010G277500 Sobic006G209850--Sobic010G277500 Sobic008G024600 Sobic008G024600 Sobic006G209850--Sobic008G024600 Sobic002G053000 Sobic002G053000 Sobic006G209850--Sobic002G053000 Sobic010G129200 Sobic010G129200 Sobic006G209850--Sobic010G129200 Sobic004G145500 Sobic004G145500 Sobic006G209850--Sobic004G145500 Sobic002G243900 Sobic002G243900 Sobic006G209850--Sobic002G243900 Sobic007G000100 Sobic007G000100 Sobic001G511500--Sobic007G000100 Sobic001G511500--Sobic006G209850 Sobic001G511500--Sobic006G128900 Sobic003G119000 Sobic003G119000 Sobic001G511500--Sobic003G119000 Sobic001G511500--Sobic004G031700 Sobic001G306900 Sobic001G306900 Sobic001G511500--Sobic001G306900 Sobic001G511500--Sobic003G445400 Sobic003G307000 Sobic003G307000 Sobic001G511500--Sobic003G307000 Sobic006G032400 Sobic006G032400 Sobic001G511500--Sobic006G032400 Sobic004G031700--Sobic009G000500 Sobic004G031700--Sobic003G445400 Sobic001G544200 Sobic001G544200 Sobic004G031700--Sobic001G544200 Sobic004G031700--Sobic001G477800 Sobic006G080300 Sobic006G080300 Sobic004G031700--Sobic006G080300 Sobic004G031700--Sobic006G128900 Sobic001G094000 Sobic001G094000 Sobic004G031700--Sobic001G094000 Sobic004G031700--Sobic001G511500 Sobic002G158700 Sobic002G158700 Sobic004G031700--Sobic002G158700 Sobic009G000500--Sobic004G031700 Sobic009G000500--Sobic003G445400 Sobic002G320500 Sobic002G320500 Sobic009G000500--Sobic002G320500 Sobic009G000500--Sobic006G128900 Sobic006G133800 Sobic006G133800 Sobic009G000500--Sobic006G133800 Sobic009G000500--Sobic001G090400 Sobic009G000500--Sobic003G307000 Sobic008G173900 Sobic008G173900 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400 Sobic003G445400--Sobic004G031700 Sobic003G445400--Sobic009G000500 Sobic003G445400--Sobic008G067600 Sobic003G445400--Sobic003G307000 Sobic003G445400--Sobic002G158700 Sobic003G445400--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic003G445400--Sobic007G096000 Sobic003G445400--Sobic001G511500 Sobic008G153000 Sobic008G153000 Sobic003G445400--Sobic008G153000 Sobic007G096600 Sobic007G096600 Sobic003G268300--Sobic007G096600 Sobic003G268300--Sobic002G157000 Sobic001G420200 Sobic001G420200 Sobic003G268300--Sobic001G420200 Sobic003G200200 Sobic003G200200 Sobic003G268300--Sobic003G200200 Sobic003G268300--Sobic002G248400 Sobic009G127900 Sobic009G127900 Sobic003G268300--Sobic009G127900 Sobic007G178700 Sobic007G178700 Sobic003G268300--Sobic007G178700 Sobic007G037900 Sobic007G037900 Sobic003G268300--Sobic007G037900 Sobic003G268300--Sobic008G173900 Sobic002G313300 Sobic002G313300 Sobic001G477800--Sobic002G313300 Sobic001G477800--Sobic004G031700 Sobic001G477800--Sobic001G094000 Sobic001G477800--Sobic001G544200 Sobic001G543900 Sobic001G543900 Sobic001G477800--Sobic001G543900 Sobic001G477800--Sobic006G080300 Sobic009G040700 Sobic009G040700 Sobic001G477800--Sobic009G040700 Sobic007G011400 Sobic007G011400 Sobic001G477800--Sobic007G011400 Sobic006G009400 Sobic006G009400 Sobic001G477800--Sobic006G009400 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000
Octagon: transcription factors


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