Gene annotation
Transcriptome id Sobic.008G067600.1,Sobic.008G067600.3,Sobic.008G067600.2
Synonym Sb08g005610
Functional annotation protein kinase PKN/PRK1, effector, putative, expressed
UniProt C5YTE2
Pfam -
Panther DB PTHR33405 PTHR33405:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55170 : -
RAP-DB (Rice) LOC_Os12g09089.2 : protein kinase PKN/PRK1, effector, putative, expressed
MaizeGDB (Corn) Zm00025a029035
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.008G067600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
2 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
3 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
4 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
5 Sobic.001G315100 TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
6 Sobic.001G512700 myb/SANT domain protein, putative, expressed -
7 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
8 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
9 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
10 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
11 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
12 Sobic.004G205600 bromodomain domain containing protein, expressed -
13 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
14 Sobic.002G320500 MYB family transcription factor, putative, expressed -
15 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
16 Sobic.002G248400 ENT domain containing protein, expressed -
17 Sobic.007G096000 expressed protein -
18 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
19 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
20 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31


Gene co-expression network
sample Sobic008G067600 Sobic008G067600 Sobic001G090400 Sobic001G090400 Sobic008G067600--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic008G067600--Sobic003G445400 Sobic004G084300 Sobic004G084300 Sobic008G067600--Sobic004G084300 Sobic002G157300 Sobic002G157300 Sobic008G067600--Sobic002G157300 Sobic001G315100 Sobic001G315100 Sobic008G067600--Sobic001G315100 Sobic001G512700 Sobic001G512700 Sobic008G067600--Sobic001G512700 Sobic009G000500 Sobic009G000500 Sobic008G067600--Sobic009G000500 Sobic004G057400 Sobic004G057400 Sobic008G067600--Sobic004G057400 Sobic008G047800 Sobic008G047800 Sobic008G067600--Sobic008G047800 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic002G320500 Sobic002G320500 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400 Sobic004G031700 Sobic004G031700 Sobic003G445400--Sobic004G031700 Sobic003G445400--Sobic009G000500 Sobic003G445400--Sobic008G067600 Sobic003G307000 Sobic003G307000 Sobic003G445400--Sobic003G307000 Sobic002G158700 Sobic002G158700 Sobic003G445400--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic003G445400--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic003G445400--Sobic007G096000 Sobic001G511500 Sobic001G511500 Sobic003G445400--Sobic001G511500 Sobic008G153000 Sobic008G153000 Sobic003G445400--Sobic008G153000 Sobic004G084300--Sobic008G047800 Sobic001G222500 Sobic001G222500 Sobic004G084300--Sobic001G222500 Sobic003G241200 Sobic003G241200 Sobic004G084300--Sobic003G241200 Sobic002G006900 Sobic002G006900 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic009G040600 Sobic009G040600 Sobic004G084300--Sobic009G040600 Sobic004G084300--Sobic008G067600 Sobic009G065100 Sobic009G065100 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic003G187400 Sobic003G187400 Sobic002G157300--Sobic003G187400 Sobic007G011400 Sobic007G011400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic010G263800 Sobic010G263800 Sobic002G157300--Sobic010G263800 Sobic002G157300--Sobic006G173100 Sobic001G315100--Sobic008G067600 Sobic001G315100--Sobic001G090400 Sobic003G084700 Sobic003G084700 Sobic001G315100--Sobic003G084700 Sobic001G315100--Sobic004G084300 Sobic001G315100--Sobic002G157300 Sobic001G315100--Sobic001G176200 Sobic003G081000 Sobic003G081000 Sobic001G315100--Sobic003G081000 Sobic001G315100--Sobic003G241200 Sobic001G315100--Sobic004G057400 Sobic001G512700--Sobic008G047800 Sobic001G512700--Sobic002G006900 Sobic003G248200 Sobic003G248200 Sobic001G512700--Sobic003G248200 Sobic001G497300 Sobic001G497300 Sobic001G512700--Sobic001G497300 Sobic007G118600 Sobic007G118600 Sobic001G512700--Sobic007G118600 Sobic004G021100 Sobic004G021100 Sobic001G512700--Sobic004G021100 Sobic005G045300 Sobic005G045300 Sobic001G512700--Sobic005G045300 Sobic002G297200 Sobic002G297200 Sobic001G512700--Sobic002G297200 Sobic001G512700--Sobic008G067600 Sobic009G000500--Sobic004G031700 Sobic009G000500--Sobic003G445400 Sobic009G000500--Sobic002G320500 Sobic009G000500--Sobic006G128900 Sobic006G133800 Sobic006G133800 Sobic009G000500--Sobic006G133800 Sobic009G000500--Sobic001G090400 Sobic009G000500--Sobic003G307000 Sobic008G173900 Sobic008G173900 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic004G057400--Sobic001G090400 Sobic004G057400--Sobic004G205600 Sobic004G057400--Sobic002G157300 Sobic004G057400--Sobic009G000500 Sobic004G057400--Sobic008G067600 Sobic004G057400--Sobic006G128900 Sobic004G057400--Sobic007G011400 Sobic004G057400--Sobic004G031700 Sobic007G205800 Sobic007G205800 Sobic004G057400--Sobic007G205800 Sobic008G047800--Sobic002G006900 Sobic008G047800--Sobic004G084300 Sobic008G047800--Sobic001G512700 Sobic001G155000 Sobic001G155000 Sobic008G047800--Sobic001G155000 Sobic008G047800--Sobic009G040600 Sobic007G011300 Sobic007G011300 Sobic008G047800--Sobic007G011300 Sobic007G217000 Sobic007G217000 Sobic008G047800--Sobic007G217000 Sobic004G274200 Sobic004G274200 Sobic008G047800--Sobic004G274200 Sobic002G309600 Sobic002G309600 Sobic008G047800--Sobic002G309600
Octagon: transcription factors


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