Gene annotation
Transcriptome id Sobic.001G315100.2,Sobic.001G315100.1,Sobic.001G315100.3
Synonym Sb01g030635
Functional annotation TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
UniProt A0A1B6QM69
Pfam PF00076
Panther DB PTHR21245 PTHR21245:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003676; nucleic acid binding


Orthologs (automatic annotation)
TAIR AT3G10400 : RNA recognition motif and CCHC-type zinc finger domains containing protein
RAP-DB (Rice) LOC_Os10g39010.5 : TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MaizeGDB (Corn) Zm00025a003143
Brachypodium KQK20935 , KQK20934 , KQK20933
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
2 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
3 Sobic.003G084700 - -
4 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
5 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
6 Sobic.001G176200 FHA domain containing protein, putative, expressed K13216: PPP1R8, nuclear inhibitor of protein phosphatase 1
7 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
8 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
9 Sobic.004G057400 copper-transporting ATPase, putative, expressed K17686: copA, ctpA, P-type Cu+ transporter
10 Sobic.010G028300 bromodomain domain containing protein, expressed -
11 Sobic.006G128800 expressed protein -
12 Sobic.003G202800 holocarboxylase synthetase, putative, expressed -
13 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
14 Sobic.008G034600 protein kinase PKN/PRK1, effector, putative, expressed -
15 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
16 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
17 Sobic.004G271900 RMD5 homolog A, putative, expressed -
18 Sobic.005G015100 OsFBX291 - F-box domain containing protein, expressed -
19 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
20 Sobic.010G202600 zinc finger, C3HC4 type domain containing protein, expressed K10661: MARCH6, E3 ubiquitin-protein ligase MARCH6


Gene co-expression network
sample Sobic001G315100 Sobic001G315100 Sobic008G067600 Sobic008G067600 Sobic001G315100--Sobic008G067600 Sobic001G090400 Sobic001G090400 Sobic001G315100--Sobic001G090400 Sobic003G084700 Sobic003G084700 Sobic001G315100--Sobic003G084700 Sobic004G084300 Sobic004G084300 Sobic001G315100--Sobic004G084300 Sobic002G157300 Sobic002G157300 Sobic001G315100--Sobic002G157300 Sobic001G176200 Sobic001G176200 Sobic001G315100--Sobic001G176200 Sobic003G081000 Sobic003G081000 Sobic001G315100--Sobic003G081000 Sobic003G241200 Sobic003G241200 Sobic001G315100--Sobic003G241200 Sobic004G057400 Sobic004G057400 Sobic001G315100--Sobic004G057400 Sobic008G067600--Sobic001G090400 Sobic003G445400 Sobic003G445400 Sobic008G067600--Sobic003G445400 Sobic008G067600--Sobic004G084300 Sobic008G067600--Sobic002G157300 Sobic008G067600--Sobic001G315100 Sobic001G512700 Sobic001G512700 Sobic008G067600--Sobic001G512700 Sobic009G000500 Sobic009G000500 Sobic008G067600--Sobic009G000500 Sobic008G067600--Sobic004G057400 Sobic008G047800 Sobic008G047800 Sobic008G067600--Sobic008G047800 Sobic001G090400--Sobic008G067600 Sobic006G173100 Sobic006G173100 Sobic001G090400--Sobic006G173100 Sobic001G090400--Sobic004G057400 Sobic001G090400--Sobic001G176200 Sobic002G320500 Sobic002G320500 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic002G248400 Sobic002G248400 Sobic001G090400--Sobic002G248400 Sobic001G107500 Sobic001G107500 Sobic003G084700--Sobic001G107500 Sobic007G078600 Sobic007G078600 Sobic003G084700--Sobic007G078600 Sobic009G065100 Sobic009G065100 Sobic003G084700--Sobic009G065100 Sobic003G084700--Sobic004G057400 Sobic003G084700--Sobic008G067600 Sobic003G084700--Sobic001G315100 Sobic003G084700--Sobic001G090400 Sobic004G271900 Sobic004G271900 Sobic003G084700--Sobic004G271900 Sobic009G215800 Sobic009G215800 Sobic003G084700--Sobic009G215800 Sobic004G084300--Sobic008G047800 Sobic001G222500 Sobic001G222500 Sobic004G084300--Sobic001G222500 Sobic004G084300--Sobic003G241200 Sobic002G006900 Sobic002G006900 Sobic004G084300--Sobic002G006900 Sobic010G236400 Sobic010G236400 Sobic004G084300--Sobic010G236400 Sobic009G040600 Sobic009G040600 Sobic004G084300--Sobic009G040600 Sobic004G084300--Sobic008G067600 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic003G187400 Sobic003G187400 Sobic002G157300--Sobic003G187400 Sobic007G011400 Sobic007G011400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic007G185900 Sobic007G185900 Sobic002G157300--Sobic007G185900 Sobic010G263800 Sobic010G263800 Sobic002G157300--Sobic010G263800 Sobic002G157300--Sobic006G173100 Sobic001G176200--Sobic001G090400 Sobic002G370900 Sobic002G370900 Sobic001G176200--Sobic002G370900 Sobic002G197100 Sobic002G197100 Sobic001G176200--Sobic002G197100 Sobic005G154500 Sobic005G154500 Sobic001G176200--Sobic005G154500 Sobic005G015900 Sobic005G015900 Sobic001G176200--Sobic005G015900 Sobic004G345700 Sobic004G345700 Sobic001G176200--Sobic004G345700 Sobic001G176200--Sobic006G173100 Sobic010G245000 Sobic010G245000 Sobic001G176200--Sobic010G245000 Sobic001G176200--Sobic002G320500 Sobic007G118200 Sobic007G118200 Sobic003G081000--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic003G081000--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic003G081000--Sobic002G034600 Sobic003G081000--Sobic004G205600 Sobic009G198100 Sobic009G198100 Sobic003G081000--Sobic009G198100 Sobic006G252700 Sobic006G252700 Sobic003G081000--Sobic006G252700 Sobic010G033400 Sobic010G033400 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic006G032400 Sobic006G032400 Sobic003G241200--Sobic006G032400 Sobic003G241200--Sobic002G248400 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic002G157000 Sobic002G157000 Sobic003G241200--Sobic002G157000 Sobic004G057400--Sobic001G090400 Sobic004G057400--Sobic004G205600 Sobic004G057400--Sobic002G157300 Sobic004G057400--Sobic009G000500 Sobic004G057400--Sobic008G067600 Sobic006G128900 Sobic006G128900 Sobic004G057400--Sobic006G128900 Sobic004G057400--Sobic007G011400 Sobic004G031700 Sobic004G031700 Sobic004G057400--Sobic004G031700 Sobic007G205800 Sobic007G205800 Sobic004G057400--Sobic007G205800
Octagon: transcription factors


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