Gene annotation
Transcriptome id Sobic.006G128800.2,Sobic.006G128800.1
Synonym Sb06g020880
Functional annotation expressed protein
UniProt A0A1Z5RDL1 , C5YBB3
Pfam -
Panther DB PTHR36310:SF1 PTHR36310
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g02690.2,LOC_Os12g02690.4 : expressed protein
MaizeGDB (Corn) Zm00025a010921
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G128800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G205501 - -
2 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
3 Sobic.004G349900 -(PubMedID : 27329702)@expressed protein -
4 Sobic.002G157300 Ser/Thr protein phosphatase family protein, putative, expressed K15423: serine/threonine-protein phosphatase 4 catalytic subunit
5 Sobic.003G261300 arginine/serine-rich coiled-coil protein 1, putative, expressed -
6 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.006G130200 expressed protein -
8 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
9 Sobic.003G008500 VHS and GAT domain containing protein, expressed -
10 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
11 Sobic.004G345700 TBC domain containing protein, expressed -
12 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
13 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
14 Sobic.004G007300 expressed protein -
15 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
16 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
17 Sobic.003G202800 holocarboxylase synthetase, putative, expressed -
18 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
19 Sobic.004G015800 zinc carboxypeptidase family protein, putative, expressed -
20 Sobic.003G336800 expressed protein -


Gene co-expression network
sample Sobic006G128800 Sobic006G128800 Sobic003G205501 Sobic003G205501 Sobic006G128800--Sobic003G205501 Sobic010G174800 Sobic010G174800 Sobic006G128800--Sobic010G174800 Sobic004G349900 Sobic004G349900 Sobic006G128800--Sobic004G349900 Sobic002G157300 Sobic002G157300 Sobic006G128800--Sobic002G157300 Sobic003G261300 Sobic003G261300 Sobic006G128800--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic006G128800--Sobic003G248500 Sobic006G130200 Sobic006G130200 Sobic006G128800--Sobic006G130200 Sobic001G514000 Sobic001G514000 Sobic006G128800--Sobic001G514000 Sobic003G008500 Sobic003G008500 Sobic006G128800--Sobic003G008500 Sobic001G408700 Sobic001G408700 Sobic003G205501--Sobic001G408700 Sobic003G205501--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic003G205501--Sobic004G345700 Sobic006G267300 Sobic006G267300 Sobic003G205501--Sobic006G267300 Sobic010G202600 Sobic010G202600 Sobic003G205501--Sobic010G202600 Sobic010G245000 Sobic010G245000 Sobic003G205501--Sobic010G245000 Sobic008G127400 Sobic008G127400 Sobic003G205501--Sobic008G127400 Sobic008G058800 Sobic008G058800 Sobic003G205501--Sobic008G058800 Sobic003G205501--Sobic003G248500 Sobic010G174800--Sobic003G248500 Sobic010G174800--Sobic006G128800 Sobic003G185200 Sobic003G185200 Sobic010G174800--Sobic003G185200 Sobic003G359300 Sobic003G359300 Sobic010G174800--Sobic003G359300 Sobic010G174800--Sobic006G130200 Sobic003G336800 Sobic003G336800 Sobic010G174800--Sobic003G336800 Sobic004G263900 Sobic004G263900 Sobic010G174800--Sobic004G263900 Sobic001G390500 Sobic001G390500 Sobic010G174800--Sobic001G390500 Sobic001G028400 Sobic001G028400 Sobic010G174800--Sobic001G028400 Sobic007G137900 Sobic007G137900 Sobic004G349900--Sobic007G137900 Sobic004G349900--Sobic002G157300 Sobic004G349900--Sobic006G128800 Sobic001G206100 Sobic001G206100 Sobic004G349900--Sobic001G206100 Sobic003G220200 Sobic003G220200 Sobic004G349900--Sobic003G220200 Sobic007G011400 Sobic007G011400 Sobic004G349900--Sobic007G011400 Sobic004G349900--Sobic003G261300 Sobic008G116500 Sobic008G116500 Sobic004G349900--Sobic008G116500 Sobic007G185900 Sobic007G185900 Sobic004G349900--Sobic007G185900 Sobic010G026400 Sobic010G026400 Sobic002G157300--Sobic010G026400 Sobic003G187400 Sobic003G187400 Sobic002G157300--Sobic003G187400 Sobic002G157300--Sobic007G011400 Sobic005G149500 Sobic005G149500 Sobic002G157300--Sobic005G149500 Sobic001G094000 Sobic001G094000 Sobic002G157300--Sobic001G094000 Sobic010G260500 Sobic010G260500 Sobic002G157300--Sobic010G260500 Sobic002G157300--Sobic007G185900 Sobic010G263800 Sobic010G263800 Sobic002G157300--Sobic010G263800 Sobic006G173100 Sobic006G173100 Sobic002G157300--Sobic006G173100 Sobic003G261300--Sobic010G026400 Sobic003G261300--Sobic002G157300 Sobic002G365100 Sobic002G365100 Sobic003G261300--Sobic002G365100 Sobic003G261300--Sobic006G128800 Sobic003G261300--Sobic003G220200 Sobic003G012500 Sobic003G012500 Sobic003G261300--Sobic003G012500 Sobic007G205800 Sobic007G205800 Sobic003G261300--Sobic007G205800 Sobic003G261300--Sobic004G349900 Sobic006G088100 Sobic006G088100 Sobic003G261300--Sobic006G088100 Sobic003G248500--Sobic003G359300 Sobic004G283000 Sobic004G283000 Sobic003G248500--Sobic004G283000 Sobic003G248500--Sobic010G174800 Sobic003G248500--Sobic001G390500 Sobic002G197100 Sobic002G197100 Sobic003G248500--Sobic002G197100 Sobic003G248500--Sobic003G185200 Sobic003G248500--Sobic002G365100 Sobic003G051200 Sobic003G051200 Sobic003G248500--Sobic003G051200 Sobic003G248500--Sobic006G128800 Sobic006G130200--Sobic006G128800 Sobic004G218300 Sobic004G218300 Sobic006G130200--Sobic004G218300 Sobic006G130200--Sobic010G174800 Sobic009G032300 Sobic009G032300 Sobic006G130200--Sobic009G032300 Sobic003G398400 Sobic003G398400 Sobic006G130200--Sobic003G398400 Sobic001G425000 Sobic001G425000 Sobic006G130200--Sobic001G425000 Sobic006G092800 Sobic006G092800 Sobic006G130200--Sobic006G092800 Sobic006G130200--Sobic003G336800 Sobic001G235000 Sobic001G235000 Sobic006G130200--Sobic001G235000 Sobic001G514000--Sobic002G157300 Sobic001G514000--Sobic004G345700 Sobic001G514000--Sobic006G173100 Sobic001G514000--Sobic003G008500 Sobic001G514000--Sobic002G197100 Sobic003G401000 Sobic003G401000 Sobic001G514000--Sobic003G401000 Sobic001G514000--Sobic007G137900 Sobic001G514000--Sobic006G128800 Sobic004G007300 Sobic004G007300 Sobic001G514000--Sobic004G007300 Sobic003G008500--Sobic002G157300 Sobic006G082900 Sobic006G082900 Sobic003G008500--Sobic006G082900 Sobic002G370900 Sobic002G370900 Sobic003G008500--Sobic002G370900 Sobic004G067700 Sobic004G067700 Sobic003G008500--Sobic004G067700 Sobic003G008500--Sobic003G401000 Sobic003G008500--Sobic001G514000 Sobic003G008500--Sobic006G173100 Sobic006G202200 Sobic006G202200 Sobic003G008500--Sobic006G202200 Sobic003G008500--Sobic006G128800
Octagon: transcription factors


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