Gene annotation
Transcriptome id Sobic.004G015800.1
Synonym Sb04g001490
Functional annotation zinc carboxypeptidase family protein, putative, expressed
UniProt C5XSE6
Pfam PF00246
Panther DB PTHR11705 PTHR11705:SF81
NCBI CDD KOG2650; Zinc carboxypeptidase
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006508proteolysis GO:0004181metallocarboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT5G42320 : Zn-dependent exopeptidases superfamily protein
RAP-DB (Rice) LOC_Os02g02710.1 : zinc carboxypeptidase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a035040
Brachypodium KQJ92951 , KQJ92946
Barley HORVU6Hr1G011160.19 , HORVU6Hr1G011160.18 , HORVU6Hr1G011160.15 , HORVU6Hr1G011160.14 , HORVU6Hr1G011160.17 , HORVU6Hr1G011160.16 , HORVU6Hr1G011160.11 , HORVU6Hr1G011160.10 , HORVU6Hr1G011160.13 , HORVU6Hr1G011160.12 , HORVU6Hr1G011160.20 , HORVU6Hr1G011160.21 , HORVU6Hr1G011160.9 , HORVU6Hr1G011160.8 , HORVU6Hr1G011160.1 , HORVU6Hr1G011160.3 , HORVU6Hr1G011160.2 , HORVU6Hr1G011160.5 , HORVU6Hr1G011160.4 , HORVU6Hr1G011160.7 , HORVU6Hr1G011160.6
Wheat TraesCS6B02G079500 , TraesCSU02G121600 , TraesCS6A02G059200
Populus -


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cDNA sequences
Sobic.004G015800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G235000 appr-1-p processing enzyme family protein, putative, expressed -
2 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
3 Sobic.004G007300 expressed protein -
4 Sobic.006G128800 expressed protein -
5 Sobic.004G345700 TBC domain containing protein, expressed -
6 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
7 Sobic.001G514000 OsFBL10 - F-box domain and LRR containing protein, expressed -
8 Sobic.010G174800 OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
9 Sobic.006G244300 expressed protein -
10 Sobic.002G197100 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
11 Sobic.006G175400 OsFBK22 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.001G056200 expressed protein -
13 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
14 Sobic.004G349900 -(PubMedID : 27329702)@expressed protein -
15 Sobic.010G074900 G protein coupled receptor, putative, expressed -
16 Sobic.003G205501 - -
17 Sobic.006G130200 expressed protein -
18 Sobic.003G437500 syntaxin 6, putative, expressed -
19 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
20 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5


Gene co-expression network
sample Sobic004G015800 Sobic004G015800 Sobic001G235000 Sobic001G235000 Sobic004G015800--Sobic001G235000 Sobic001G408700 Sobic001G408700 Sobic004G015800--Sobic001G408700 Sobic004G007300 Sobic004G007300 Sobic004G015800--Sobic004G007300 Sobic006G128800 Sobic006G128800 Sobic004G015800--Sobic006G128800 Sobic004G345700 Sobic004G345700 Sobic004G015800--Sobic004G345700 Sobic006G092800 Sobic006G092800 Sobic004G015800--Sobic006G092800 Sobic001G514000 Sobic001G514000 Sobic004G015800--Sobic001G514000 Sobic010G174800 Sobic010G174800 Sobic004G015800--Sobic010G174800 Sobic006G244300 Sobic006G244300 Sobic004G015800--Sobic006G244300 Sobic001G235000--Sobic004G015800 Sobic001G235000--Sobic004G345700 Sobic001G235000--Sobic010G174800 Sobic001G235000--Sobic001G514000 Sobic003G073000 Sobic003G073000 Sobic001G235000--Sobic003G073000 Sobic002G157300 Sobic002G157300 Sobic001G235000--Sobic002G157300 Sobic006G130200 Sobic006G130200 Sobic001G235000--Sobic006G130200 Sobic001G235000--Sobic001G408700 Sobic001G235000--Sobic006G128800 Sobic003G205501 Sobic003G205501 Sobic001G408700--Sobic003G205501 Sobic001G408700--Sobic004G007300 Sobic001G408700--Sobic004G345700 Sobic001G056200 Sobic001G056200 Sobic001G408700--Sobic001G056200 Sobic007G118200 Sobic007G118200 Sobic001G408700--Sobic007G118200 Sobic006G267300 Sobic006G267300 Sobic001G408700--Sobic006G267300 Sobic002G197100 Sobic002G197100 Sobic001G408700--Sobic002G197100 Sobic004G283000 Sobic004G283000 Sobic001G408700--Sobic004G283000 Sobic010G245000 Sobic010G245000 Sobic001G408700--Sobic010G245000 Sobic004G007300--Sobic002G197100 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic004G007300--Sobic001G056200 Sobic006G128800--Sobic003G205501 Sobic006G128800--Sobic010G174800 Sobic004G349900 Sobic004G349900 Sobic006G128800--Sobic004G349900 Sobic006G128800--Sobic002G157300 Sobic003G261300 Sobic003G261300 Sobic006G128800--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic006G128800--Sobic003G248500 Sobic006G128800--Sobic006G130200 Sobic006G128800--Sobic001G514000 Sobic003G008500 Sobic003G008500 Sobic006G128800--Sobic003G008500 Sobic004G345700--Sobic002G197100 Sobic004G345700--Sobic001G514000 Sobic004G345700--Sobic004G007300 Sobic004G345700--Sobic001G408700 Sobic005G154500 Sobic005G154500 Sobic004G345700--Sobic005G154500 Sobic001G176200 Sobic001G176200 Sobic004G345700--Sobic001G176200 Sobic004G345700--Sobic006G092800 Sobic004G345700--Sobic003G205501 Sobic004G345700--Sobic010G245000 Sobic006G092800--Sobic004G007300 Sobic006G092800--Sobic004G345700 Sobic007G088900 Sobic007G088900 Sobic006G092800--Sobic007G088900 Sobic006G092800--Sobic001G056200 Sobic006G092800--Sobic006G128800 Sobic006G092800--Sobic002G197100 Sobic006G254600 Sobic006G254600 Sobic006G092800--Sobic006G254600 Sobic006G092800--Sobic001G408700 Sobic003G437500 Sobic003G437500 Sobic006G092800--Sobic003G437500 Sobic001G514000--Sobic002G157300 Sobic001G514000--Sobic004G345700 Sobic001G514000--Sobic006G173100 Sobic001G514000--Sobic003G008500 Sobic001G514000--Sobic002G197100 Sobic003G401000 Sobic003G401000 Sobic001G514000--Sobic003G401000 Sobic007G137900 Sobic007G137900 Sobic001G514000--Sobic007G137900 Sobic001G514000--Sobic006G128800 Sobic001G514000--Sobic004G007300 Sobic010G174800--Sobic003G248500 Sobic010G174800--Sobic006G128800 Sobic003G185200 Sobic003G185200 Sobic010G174800--Sobic003G185200 Sobic003G359300 Sobic003G359300 Sobic010G174800--Sobic003G359300 Sobic010G174800--Sobic006G130200 Sobic003G336800 Sobic003G336800 Sobic010G174800--Sobic003G336800 Sobic004G263900 Sobic004G263900 Sobic010G174800--Sobic004G263900 Sobic001G390500 Sobic001G390500 Sobic010G174800--Sobic001G390500 Sobic001G028400 Sobic001G028400 Sobic010G174800--Sobic001G028400 Sobic006G244300--Sobic001G408700 Sobic006G244300--Sobic004G015800 Sobic006G046700 Sobic006G046700 Sobic006G244300--Sobic006G046700 Sobic004G345400 Sobic004G345400 Sobic006G244300--Sobic004G345400 Sobic006G244300--Sobic003G205501 Sobic010G074900 Sobic010G074900 Sobic006G244300--Sobic010G074900 Sobic008G058800 Sobic008G058800 Sobic006G244300--Sobic008G058800 Sobic006G244300--Sobic004G345700 Sobic009G129600 Sobic009G129600 Sobic006G244300--Sobic009G129600
Octagon: transcription factors


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