Gene annotation
Transcriptome id Sobic.001G056200.1
Synonym Sb01g005120
Functional annotation expressed protein
UniProt C5WX64
Pfam PF10153
Panther DB PTHR33911
NCBI CDD KOG4484; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G04230 : Protein of unknown function (DUF2361)
RAP-DB (Rice) LOC_Os03g58340.1 : expressed protein
MaizeGDB (Corn) Zm00025a016566
Brachypodium PNT73972 , KQK12697
Barley HORVU5Hr1G106320.3 , HORVU5Hr1G106320.2 , HORVU5Hr1G106320.1 , HORVU5Hr1G106320.5 , HORVU5Hr1G106320.4
Wheat TraesCS5D02G449300 , TraesCS5D02G449300 , TraesCS5D02G449300 , TraesCS5B02G446000 , TraesCS5A02G442000 , TraesCS5A02G442000 , TraesCS5B02G446000 , TraesCS5B02G446000
Populus -


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cDNA sequences
Sobic.001G056200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
2 Sobic.004G263900 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
3 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
4 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
5 Sobic.001G028400 domain of unknown function domain containing protein, expressed -
6 Sobic.003G437500 syntaxin 6, putative, expressed -
7 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
8 Sobic.004G007300 expressed protein -
9 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
10 Sobic.003G359300 ELM2 domain containing protein, putative, expressed -
11 Sobic.004G350100 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed K05610: UCHL5, ubiquitin carboxyl-terminal hydrolase L5
12 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
13 Sobic.006G092800 proteasome subunit, putative, expressed K03036: PSMD11, 26S proteasome regulatory subunit N6
14 Sobic.007G118200 RNA recognition motif containing protein, expressed K12897: transformer-2 protein
15 Sobic.002G378200 adaptor complexes medium subunit family domain containing protein, expressed K12402: AP-4 complex subunit mu-1
16 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.010G028300 bromodomain domain containing protein, expressed -
18 Sobic.008G129700 PAPA-1-like conserved region family protein, expressed K11666: INO80B, ZNHIT4, INO80 complex subunit B
19 Sobic.004G283000 nucleic acid binding protein, putative, expressed -
20 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA


Gene co-expression network
sample Sobic001G056200 Sobic001G056200 Sobic002G084300 Sobic002G084300 Sobic001G056200--Sobic002G084300 Sobic004G263900 Sobic004G263900 Sobic001G056200--Sobic004G263900 Sobic001G408700 Sobic001G408700 Sobic001G056200--Sobic001G408700 Sobic004G013600 Sobic004G013600 Sobic001G056200--Sobic004G013600 Sobic001G028400 Sobic001G028400 Sobic001G056200--Sobic001G028400 Sobic003G437500 Sobic003G437500 Sobic001G056200--Sobic003G437500 Sobic006G088100 Sobic006G088100 Sobic001G056200--Sobic006G088100 Sobic004G007300 Sobic004G007300 Sobic001G056200--Sobic004G007300 Sobic008G174300 Sobic008G174300 Sobic001G056200--Sobic008G174300 Sobic002G084300--Sobic001G056200 Sobic002G084300--Sobic004G263900 Sobic002G084300--Sobic008G174300 Sobic002G378200 Sobic002G378200 Sobic002G084300--Sobic002G378200 Sobic002G084300--Sobic001G028400 Sobic002G084300--Sobic001G408700 Sobic001G390500 Sobic001G390500 Sobic002G084300--Sobic001G390500 Sobic003G081000 Sobic003G081000 Sobic002G084300--Sobic003G081000 Sobic009G198100 Sobic009G198100 Sobic002G084300--Sobic009G198100 Sobic010G055500 Sobic010G055500 Sobic004G263900--Sobic010G055500 Sobic010G071200 Sobic010G071200 Sobic004G263900--Sobic010G071200 Sobic004G263900--Sobic001G056200 Sobic003G359300 Sobic003G359300 Sobic004G263900--Sobic003G359300 Sobic004G263900--Sobic008G174300 Sobic007G063200 Sobic007G063200 Sobic004G263900--Sobic007G063200 Sobic010G260500 Sobic010G260500 Sobic004G263900--Sobic010G260500 Sobic004G263900--Sobic001G028400 Sobic004G263900--Sobic002G084300 Sobic003G205501 Sobic003G205501 Sobic001G408700--Sobic003G205501 Sobic001G408700--Sobic004G007300 Sobic004G345700 Sobic004G345700 Sobic001G408700--Sobic004G345700 Sobic001G408700--Sobic001G056200 Sobic007G118200 Sobic007G118200 Sobic001G408700--Sobic007G118200 Sobic006G267300 Sobic006G267300 Sobic001G408700--Sobic006G267300 Sobic002G197100 Sobic002G197100 Sobic001G408700--Sobic002G197100 Sobic004G283000 Sobic004G283000 Sobic001G408700--Sobic004G283000 Sobic010G245000 Sobic010G245000 Sobic001G408700--Sobic010G245000 Sobic004G013600--Sobic001G056200 Sobic004G013600--Sobic001G028400 Sobic003G354100 Sobic003G354100 Sobic004G013600--Sobic003G354100 Sobic010G211300 Sobic010G211300 Sobic004G013600--Sobic010G211300 Sobic006G248500 Sobic006G248500 Sobic004G013600--Sobic006G248500 Sobic007G205000 Sobic007G205000 Sobic004G013600--Sobic007G205000 Sobic009G030300 Sobic009G030300 Sobic004G013600--Sobic009G030300 Sobic004G013600--Sobic003G437500 Sobic004G013600--Sobic007G118200 Sobic010G033400 Sobic010G033400 Sobic001G028400--Sobic010G033400 Sobic001G028400--Sobic007G063200 Sobic001G028400--Sobic001G056200 Sobic001G028400--Sobic004G263900 Sobic001G028400--Sobic003G359300 Sobic001G028400--Sobic007G205000 Sobic001G028400--Sobic003G437500 Sobic001G028400--Sobic007G118200 Sobic001G028400--Sobic010G211300 Sobic003G437500--Sobic001G028400 Sobic003G437500--Sobic001G056200 Sobic003G437500--Sobic006G088100 Sobic003G202800 Sobic003G202800 Sobic003G437500--Sobic003G202800 Sobic006G092800 Sobic006G092800 Sobic003G437500--Sobic006G092800 Sobic003G437500--Sobic004G013600 Sobic007G088900 Sobic007G088900 Sobic003G437500--Sobic007G088900 Sobic003G437500--Sobic004G263900 Sobic003G437500--Sobic003G359300 Sobic006G088100--Sobic001G056200 Sobic006G088100--Sobic004G263900 Sobic006G088100--Sobic003G202800 Sobic006G088100--Sobic003G437500 Sobic003G261300 Sobic003G261300 Sobic006G088100--Sobic003G261300 Sobic006G209500 Sobic006G209500 Sobic006G088100--Sobic006G209500 Sobic001G119300 Sobic001G119300 Sobic006G088100--Sobic001G119300 Sobic002G350300 Sobic002G350300 Sobic006G088100--Sobic002G350300 Sobic006G128800 Sobic006G128800 Sobic006G088100--Sobic006G128800 Sobic004G007300--Sobic002G197100 Sobic004G007300--Sobic001G408700 Sobic004G007300--Sobic004G345700 Sobic004G007300--Sobic006G092800 Sobic004G350100 Sobic004G350100 Sobic004G007300--Sobic004G350100 Sobic006G173100 Sobic006G173100 Sobic004G007300--Sobic006G173100 Sobic004G007300--Sobic004G283000 Sobic008G129100 Sobic008G129100 Sobic004G007300--Sobic008G129100 Sobic004G007300--Sobic001G056200 Sobic001G131800 Sobic001G131800 Sobic008G174300--Sobic001G131800 Sobic008G174300--Sobic010G260500 Sobic008G174300--Sobic010G033400 Sobic008G174300--Sobic003G081000 Sobic008G174300--Sobic007G118200 Sobic008G174300--Sobic004G263900 Sobic008G174300--Sobic009G198100 Sobic003G355000 Sobic003G355000 Sobic008G174300--Sobic003G355000 Sobic008G174300--Sobic003G359300
Octagon: transcription factors


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