Gene annotation
Transcriptome id Sobic.010G028300.2,Sobic.010G028300.1
Synonym GTE1, GTE01, Sb10g002570, IMB1
Functional annotation bromodomain domain containing protein, expressed
UniProt C5Z3Q9 , A0A1W0VR80
Pfam PF00439 PF17035
Panther DB PTHR22880 PTHR22880:SF163
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G34900 : Transcription factor GTE6
RAP-DB (Rice) LOC_Os06g04640.1 : bromodomain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a041451
Brachypodium KQK19941
Barley HORVU5Hr1G097840.14 , HORVU5Hr1G097840.13 , HORVU5Hr1G097840.11 , HORVU5Hr1G097840.10 , HORVU5Hr1G097840.9 , HORVU5Hr1G097840.8 , HORVU5Hr1G097840.7 , HORVU5Hr1G097840.5 , HORVU5Hr1G097840.3 , HORVU5Hr1G097840.1 , HORVU5Hr1G097840.6 , HORVU5Hr1G097840.4 , HORVU5Hr1G097840.2
Wheat TraesCS7A02G080900 , TraesCS7D02G074500 , TraesCS7D02G074500 , TraesCS4A02G377900 , TraesCS4A02G377900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
2 Sobic.002G350300 gamma response I protein, putative, expressed K13096: splicing factor 4
3 Sobic.001G056200 expressed protein -
4 Sobic.006G121300 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
5 Sobic.001G131800 expressed protein K15186: ELL-associated factor
6 Sobic.001G315100 TKL_IRAK_CrRLK1L-1.16 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
7 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
8 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
9 Sobic.004G013600 autophagy protein 5, putative, expressed K08339: autophagy-related protein 5
10 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
11 Sobic.008G174300 GTPase of unknown function domain containing protein, putative, expressed K14539: large subunit GTPase 1
12 Sobic.002G084300 ras-related protein, putative, expressed K07901: RAB8A, Ras-related protein Rab-8A
13 Sobic.010G033400 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
14 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
15 Sobic.006G088100 coiled-coil domain-containing protein 55, putative, expressed K13206: coiled-coil domain-containing protein 55
16 Sobic.007G205000 zinc finger family protein, putative, expressed -
17 Sobic.001G053800 expressed protein -
18 Sobic.001G408700 kinesin like protein, putative, expressed K18182: cytochrome c oxidase assembly protein subunit 16
19 Sobic.007G075900 SKP1, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
20 Sobic.007G111100 PSF3 - Putative GINS complex subunit, expressed K10734: GINS complex subunit 3


Gene co-expression network
sample Sobic010G028300 Sobic010G028300 Sobic003G401100 Sobic003G401100 Sobic010G028300--Sobic003G401100 Sobic002G350300 Sobic002G350300 Sobic010G028300--Sobic002G350300 Sobic001G056200 Sobic001G056200 Sobic010G028300--Sobic001G056200 Sobic006G121300 Sobic006G121300 Sobic010G028300--Sobic006G121300 Sobic001G131800 Sobic001G131800 Sobic010G028300--Sobic001G131800 Sobic001G315100 Sobic001G315100 Sobic010G028300--Sobic001G315100 Sobic008G179700 Sobic008G179700 Sobic010G028300--Sobic008G179700 Sobic003G081000 Sobic003G081000 Sobic010G028300--Sobic003G081000 Sobic004G013600 Sobic004G013600 Sobic010G028300--Sobic004G013600 Sobic010G236400 Sobic010G236400 Sobic003G401100--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic003G401100--Sobic004G084300 Sobic001G281600 Sobic001G281600 Sobic003G401100--Sobic001G281600 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic001G143500 Sobic001G143500 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic002G350300--Sobic008G179700 Sobic009G205200 Sobic009G205200 Sobic002G350300--Sobic009G205200 Sobic009G179700 Sobic009G179700 Sobic002G350300--Sobic009G179700 Sobic001G107500 Sobic001G107500 Sobic002G350300--Sobic001G107500 Sobic001G512700 Sobic001G512700 Sobic002G350300--Sobic001G512700 Sobic007G132400 Sobic007G132400 Sobic002G350300--Sobic007G132400 Sobic002G350300--Sobic010G028300 Sobic001G119300 Sobic001G119300 Sobic002G350300--Sobic001G119300 Sobic006G088100 Sobic006G088100 Sobic002G350300--Sobic006G088100 Sobic002G084300 Sobic002G084300 Sobic001G056200--Sobic002G084300 Sobic004G263900 Sobic004G263900 Sobic001G056200--Sobic004G263900 Sobic001G408700 Sobic001G408700 Sobic001G056200--Sobic001G408700 Sobic001G056200--Sobic004G013600 Sobic001G028400 Sobic001G028400 Sobic001G056200--Sobic001G028400 Sobic003G437500 Sobic003G437500 Sobic001G056200--Sobic003G437500 Sobic001G056200--Sobic006G088100 Sobic004G007300 Sobic004G007300 Sobic001G056200--Sobic004G007300 Sobic008G174300 Sobic008G174300 Sobic001G056200--Sobic008G174300 Sobic001G395100 Sobic001G395100 Sobic006G121300--Sobic001G395100 Sobic002G034600 Sobic002G034600 Sobic006G121300--Sobic002G034600 Sobic001G216100 Sobic001G216100 Sobic006G121300--Sobic001G216100 Sobic006G121300--Sobic010G028300 Sobic007G056500 Sobic007G056500 Sobic006G121300--Sobic007G056500 Sobic001G473600 Sobic001G473600 Sobic006G121300--Sobic001G473600 Sobic006G121300--Sobic008G179700 Sobic006G121300--Sobic003G401100 Sobic005G160400 Sobic005G160400 Sobic006G121300--Sobic005G160400 Sobic001G131800--Sobic008G174300 Sobic001G131800--Sobic003G081000 Sobic010G202600 Sobic010G202600 Sobic001G131800--Sobic010G202600 Sobic010G033400 Sobic010G033400 Sobic001G131800--Sobic010G033400 Sobic009G198100 Sobic009G198100 Sobic001G131800--Sobic009G198100 Sobic001G131800--Sobic007G132400 Sobic001G131800--Sobic001G107500 Sobic007G111100 Sobic007G111100 Sobic001G131800--Sobic007G111100 Sobic003G359300 Sobic003G359300 Sobic001G131800--Sobic003G359300 Sobic008G067600 Sobic008G067600 Sobic001G315100--Sobic008G067600 Sobic001G090400 Sobic001G090400 Sobic001G315100--Sobic001G090400 Sobic003G084700 Sobic003G084700 Sobic001G315100--Sobic003G084700 Sobic001G315100--Sobic004G084300 Sobic002G157300 Sobic002G157300 Sobic001G315100--Sobic002G157300 Sobic001G176200 Sobic001G176200 Sobic001G315100--Sobic001G176200 Sobic001G315100--Sobic003G081000 Sobic001G315100--Sobic003G241200 Sobic004G057400 Sobic004G057400 Sobic001G315100--Sobic004G057400 Sobic008G179700--Sobic002G350300 Sobic003G248200 Sobic003G248200 Sobic008G179700--Sobic003G248200 Sobic008G179700--Sobic001G281600 Sobic001G356600 Sobic001G356600 Sobic008G179700--Sobic001G356600 Sobic008G179700--Sobic009G179700 Sobic008G179700--Sobic004G084300 Sobic008G179700--Sobic003G401100 Sobic002G126500 Sobic002G126500 Sobic008G179700--Sobic002G126500 Sobic008G179700--Sobic001G512700 Sobic007G118200 Sobic007G118200 Sobic003G081000--Sobic007G118200 Sobic003G081000--Sobic008G174300 Sobic003G081000--Sobic002G034600 Sobic004G205600 Sobic004G205600 Sobic003G081000--Sobic004G205600 Sobic003G081000--Sobic009G198100 Sobic006G252700 Sobic006G252700 Sobic003G081000--Sobic006G252700 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100 Sobic004G013600--Sobic001G056200 Sobic004G013600--Sobic001G028400 Sobic003G354100 Sobic003G354100 Sobic004G013600--Sobic003G354100 Sobic010G211300 Sobic010G211300 Sobic004G013600--Sobic010G211300 Sobic006G248500 Sobic006G248500 Sobic004G013600--Sobic006G248500 Sobic007G205000 Sobic007G205000 Sobic004G013600--Sobic007G205000 Sobic009G030300 Sobic009G030300 Sobic004G013600--Sobic009G030300 Sobic004G013600--Sobic003G437500 Sobic004G013600--Sobic007G118200
Octagon: transcription factors


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