Gene annotation
Transcriptome id Sobic.003G401100.1
Synonym Sb03g043740
Functional annotation WW domain containing protein, expressed
UniProt C5XG76
Pfam PF00397
Panther DB PTHR21737 PTHR21737:SF3
NCBI CDD KOG3427; Polyglutamine tract-binding protein PQBP-1
KEGG Orthology K12865; PQBP1, polyglutamine-binding protein 1
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT2G41020 : WW domain-containing protein
RAP-DB (Rice) LOC_Os01g68760.1 : WW domain containing protein, expressed
MaizeGDB (Corn) Zm00025a039346
Brachypodium KQK11187
Barley HORVU3Hr1G093330.7 , HORVU3Hr1G093330.5 , HORVU3Hr1G093330.4 , HORVU3Hr1G093330.3 , HORVU3Hr1G093330.2 , HORVU3Hr1G093330.1 , HORVU3Hr1G093330.9 , HORVU3Hr1G093330.8
Wheat TraesCS3A02G421600 , TraesCS3A02G421600 , TraesCS3D02G417100 , TraesCS3D02G417100 , TraesCS3B02G457200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
2 Sobic.004G084300 MYB family transcription factor, putative, expressed K11324: DMAP1, SWC4, DNA methyltransferase 1-associated protein 1
3 Sobic.001G281600 cyclin-dependent kinase E-1, putative, expressed K02208: cyclin-dependent kinase 8/11
4 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
5 Sobic.007G027700 expressed protein -
6 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
7 Sobic.007G000800 expressed protein -
8 Sobic.004G274200 ara54-like RING finger protein, putative, expressed K11971: RNF14, E3 ubiquitin-protein ligase RNF14
9 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
10 Sobic.010G279700 signal peptide peptidase-like 2B, putative, expressed -
11 Sobic.010G028300 bromodomain domain containing protein, expressed -
12 Sobic.006G278700 expressed protein -
13 Sobic.002G034600 zinc ion binding protein, putative, expressed -
14 Sobic.006G252700 protein kinase domain containing protein, expressed -
15 Sobic.001G515100 ATP binding protein, putative, expressed K06883: uncharacterized protein
16 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
17 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
18 Sobic.008G179700 TATA-binding protein, putative, expressed K03120: TBP, transcription initiation factor TFIID TATA-box-binding protein
19 Sobic.004G205600 bromodomain domain containing protein, expressed -
20 Sobic.007G009400 bromodomain domain containing protein, expressed -


Gene co-expression network
sample Sobic003G401100 Sobic003G401100 Sobic010G236400 Sobic010G236400 Sobic003G401100--Sobic010G236400 Sobic004G084300 Sobic004G084300 Sobic003G401100--Sobic004G084300 Sobic001G281600 Sobic001G281600 Sobic003G401100--Sobic001G281600 Sobic003G081000 Sobic003G081000 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic001G143500 Sobic001G143500 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G241200 Sobic003G241200 Sobic003G401100--Sobic003G241200 Sobic010G236400--Sobic004G084300 Sobic002G264200 Sobic002G264200 Sobic010G236400--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic010G236400--Sobic010G069100 Sobic002G126500 Sobic002G126500 Sobic010G236400--Sobic002G126500 Sobic010G236400--Sobic004G274200 Sobic010G116600 Sobic010G116600 Sobic010G236400--Sobic010G116600 Sobic007G183900 Sobic007G183900 Sobic010G236400--Sobic007G183900 Sobic002G071500 Sobic002G071500 Sobic010G236400--Sobic002G071500 Sobic010G236400--Sobic003G401100 Sobic008G047800 Sobic008G047800 Sobic004G084300--Sobic008G047800 Sobic001G222500 Sobic001G222500 Sobic004G084300--Sobic001G222500 Sobic004G084300--Sobic003G241200 Sobic002G006900 Sobic002G006900 Sobic004G084300--Sobic002G006900 Sobic004G084300--Sobic010G236400 Sobic009G040600 Sobic009G040600 Sobic004G084300--Sobic009G040600 Sobic008G067600 Sobic008G067600 Sobic004G084300--Sobic008G067600 Sobic009G065100 Sobic009G065100 Sobic004G084300--Sobic009G065100 Sobic007G132400 Sobic007G132400 Sobic004G084300--Sobic007G132400 Sobic010G279700 Sobic010G279700 Sobic001G281600--Sobic010G279700 Sobic007G078500 Sobic007G078500 Sobic001G281600--Sobic007G078500 Sobic006G200600 Sobic006G200600 Sobic001G281600--Sobic006G200600 Sobic001G281600--Sobic003G401100 Sobic004G121100 Sobic004G121100 Sobic001G281600--Sobic004G121100 Sobic009G215800 Sobic009G215800 Sobic001G281600--Sobic009G215800 Sobic001G281600--Sobic004G084300 Sobic009G050900 Sobic009G050900 Sobic001G281600--Sobic009G050900 Sobic008G179700 Sobic008G179700 Sobic001G281600--Sobic008G179700 Sobic007G118200 Sobic007G118200 Sobic003G081000--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic003G081000--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic003G081000--Sobic002G034600 Sobic004G205600 Sobic004G205600 Sobic003G081000--Sobic004G205600 Sobic009G198100 Sobic009G198100 Sobic003G081000--Sobic009G198100 Sobic006G252700 Sobic006G252700 Sobic003G081000--Sobic006G252700 Sobic010G033400 Sobic010G033400 Sobic003G081000--Sobic010G033400 Sobic001G466700 Sobic001G466700 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100 Sobic008G127400 Sobic008G127400 Sobic007G027700--Sobic008G127400 Sobic007G027700--Sobic003G401100 Sobic003G412300 Sobic003G412300 Sobic007G027700--Sobic003G412300 Sobic007G027700--Sobic001G143500 Sobic004G325400 Sobic004G325400 Sobic007G027700--Sobic004G325400 Sobic005G216300 Sobic005G216300 Sobic007G027700--Sobic005G216300 Sobic001G395100 Sobic001G395100 Sobic007G027700--Sobic001G395100 Sobic010G279900 Sobic010G279900 Sobic007G027700--Sobic010G279900 Sobic006G267300 Sobic006G267300 Sobic007G027700--Sobic006G267300 Sobic001G143500--Sobic006G252700 Sobic007G111100 Sobic007G111100 Sobic001G143500--Sobic007G111100 Sobic002G313500 Sobic002G313500 Sobic001G143500--Sobic002G313500 Sobic001G143500--Sobic004G350100 Sobic001G143500--Sobic003G401100 Sobic003G439800 Sobic003G439800 Sobic001G143500--Sobic003G439800 Sobic001G143500--Sobic001G466700 Sobic006G278700 Sobic006G278700 Sobic001G143500--Sobic006G278700 Sobic001G143500--Sobic006G267300 Sobic002G158700 Sobic002G158700 Sobic007G000800--Sobic002G158700 Sobic007G000800--Sobic003G401100 Sobic008G149800 Sobic008G149800 Sobic007G000800--Sobic008G149800 Sobic010G245000 Sobic010G245000 Sobic007G000800--Sobic010G245000 Sobic002G259800 Sobic002G259800 Sobic007G000800--Sobic002G259800 Sobic001G167200 Sobic001G167200 Sobic007G000800--Sobic001G167200 Sobic004G345700 Sobic004G345700 Sobic007G000800--Sobic004G345700 Sobic008G083000 Sobic008G083000 Sobic007G000800--Sobic008G083000 Sobic008G173100 Sobic008G173100 Sobic007G000800--Sobic008G173100 Sobic004G274200--Sobic008G047800 Sobic004G274200--Sobic010G236400 Sobic004G146500 Sobic004G146500 Sobic004G274200--Sobic004G146500 Sobic004G021100 Sobic004G021100 Sobic004G274200--Sobic004G021100 Sobic008G112800 Sobic008G112800 Sobic004G274200--Sobic008G112800 Sobic003G352200 Sobic003G352200 Sobic004G274200--Sobic003G352200 Sobic009G044800 Sobic009G044800 Sobic004G274200--Sobic009G044800 Sobic004G274200--Sobic002G071500 Sobic001G114000 Sobic001G114000 Sobic004G274200--Sobic001G114000 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic006G032400 Sobic006G032400 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic002G157000 Sobic002G157000 Sobic003G241200--Sobic002G157000
Octagon: transcription factors


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