Gene annotation
Transcriptome id Sobic.007G009400.1
Synonym Sb07g000993
Functional annotation bromodomain domain containing protein, expressed
UniProt C5YLV5
Pfam PF00439
Panther DB PTHR22880 PTHR22880:SF174
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G58025 : DNA-binding bromodomain-containing protein
RAP-DB (Rice) LOC_Os08g01794.1 : bromodomain domain containing protein, expressed
MaizeGDB (Corn) Zm00025a025104 , Zm00025a030299
Brachypodium -
Barley HORVU7Hr1G077000.3 , HORVU7Hr1G077000.2 , HORVU7Hr1G077000.1
Wheat TraesCS7D02G318700 , TraesCS7D02G318700 , TraesCS7B02G222600 , TraesCS7B02G222600 , TraesCS7A02G321700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
2 Sobic.003G401100 WW domain containing protein, expressed K12865: PQBP1, polyglutamine-binding protein 1
3 Sobic.004G205600 bromodomain domain containing protein, expressed -
4 Sobic.010G101800 dynamin, putative, expressed K01528: dynamin 1/3
5 Sobic.007G104800 expressed protein -
6 Sobic.004G325400 cyclic nucleotide-gated ion channel 14, putative, expressed K05391: cyclic nucleotide gated channel, plant
7 Sobic.002G388200 LTV1, putative, expressed K14798: protein LTV1
8 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
9 Sobic.003G081000 transcription factor, putative, expressed K14431: transcription factor TGA
10 Sobic.002G248400 ENT domain containing protein, expressed -
11 Sobic.001G016000 expressed protein K07759: poly(ADP-ribose) glycohydrolase
12 Sobic.001G143500 pleckstrin homology domain-containing protein, putative, expressed -
13 Sobic.006G165000 RNA recognition motif containing protein, expressed -
14 Sobic.004G021100 SSE1, putative, expressed K13335: peroxin-16
15 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
16 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
17 Sobic.007G027700 expressed protein -
18 Sobic.007G132400 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
19 Sobic.002G034600 zinc ion binding protein, putative, expressed -
20 Sobic.009G005500 expressed protein -


Gene co-expression network
sample Sobic007G009400 Sobic007G009400 Sobic003G241200 Sobic003G241200 Sobic007G009400--Sobic003G241200 Sobic003G401100 Sobic003G401100 Sobic007G009400--Sobic003G401100 Sobic004G205600 Sobic004G205600 Sobic007G009400--Sobic004G205600 Sobic010G101800 Sobic010G101800 Sobic007G009400--Sobic010G101800 Sobic007G104800 Sobic007G104800 Sobic007G009400--Sobic007G104800 Sobic004G325400 Sobic004G325400 Sobic007G009400--Sobic004G325400 Sobic002G388200 Sobic002G388200 Sobic007G009400--Sobic002G388200 Sobic001G409600 Sobic001G409600 Sobic007G009400--Sobic001G409600 Sobic003G081000 Sobic003G081000 Sobic007G009400--Sobic003G081000 Sobic004G084300 Sobic004G084300 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic006G032400 Sobic006G032400 Sobic003G241200--Sobic006G032400 Sobic002G248400 Sobic002G248400 Sobic003G241200--Sobic002G248400 Sobic002G320500 Sobic002G320500 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic010G236400 Sobic010G236400 Sobic003G241200--Sobic010G236400 Sobic003G200200 Sobic003G200200 Sobic003G241200--Sobic003G200200 Sobic002G157000 Sobic002G157000 Sobic003G241200--Sobic002G157000 Sobic003G401100--Sobic010G236400 Sobic003G401100--Sobic004G084300 Sobic001G281600 Sobic001G281600 Sobic003G401100--Sobic001G281600 Sobic003G401100--Sobic003G081000 Sobic007G027700 Sobic007G027700 Sobic003G401100--Sobic007G027700 Sobic001G143500 Sobic001G143500 Sobic003G401100--Sobic001G143500 Sobic007G000800 Sobic007G000800 Sobic003G401100--Sobic007G000800 Sobic004G274200 Sobic004G274200 Sobic003G401100--Sobic004G274200 Sobic003G401100--Sobic003G241200 Sobic004G057400 Sobic004G057400 Sobic004G205600--Sobic004G057400 Sobic001G497300 Sobic001G497300 Sobic004G205600--Sobic001G497300 Sobic001G090400 Sobic001G090400 Sobic004G205600--Sobic001G090400 Sobic004G205600--Sobic003G081000 Sobic007G026300 Sobic007G026300 Sobic004G205600--Sobic007G026300 Sobic009G000500 Sobic009G000500 Sobic004G205600--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic004G205600--Sobic002G157300 Sobic009G065100 Sobic009G065100 Sobic004G205600--Sobic009G065100 Sobic004G205600--Sobic002G157000 Sobic002G297200 Sobic002G297200 Sobic010G101800--Sobic002G297200 Sobic001G155000 Sobic001G155000 Sobic010G101800--Sobic001G155000 Sobic007G167500 Sobic007G167500 Sobic010G101800--Sobic007G167500 Sobic010G028800 Sobic010G028800 Sobic010G101800--Sobic010G028800 Sobic003G397800 Sobic003G397800 Sobic010G101800--Sobic003G397800 Sobic010G101800--Sobic001G409600 Sobic002G310200 Sobic002G310200 Sobic010G101800--Sobic002G310200 Sobic010G053800 Sobic010G053800 Sobic010G101800--Sobic010G053800 Sobic002G309600 Sobic002G309600 Sobic010G101800--Sobic002G309600 Sobic007G104800--Sobic001G497300 Sobic004G021100 Sobic004G021100 Sobic007G104800--Sobic004G021100 Sobic001G119300 Sobic001G119300 Sobic007G104800--Sobic001G119300 Sobic003G187400 Sobic003G187400 Sobic007G104800--Sobic003G187400 Sobic007G200600 Sobic007G200600 Sobic007G104800--Sobic007G200600 Sobic001G512700 Sobic001G512700 Sobic007G104800--Sobic001G512700 Sobic007G104800--Sobic004G205600 Sobic007G104800--Sobic007G026300 Sobic001G107500 Sobic001G107500 Sobic007G104800--Sobic001G107500 Sobic009G257800 Sobic009G257800 Sobic004G325400--Sobic009G257800 Sobic004G325400--Sobic007G027700 Sobic004G325400--Sobic007G009400 Sobic004G325400--Sobic003G401100 Sobic004G325400--Sobic001G143500 Sobic004G021200 Sobic004G021200 Sobic004G325400--Sobic004G021200 Sobic003G401000 Sobic003G401000 Sobic004G325400--Sobic003G401000 Sobic004G072100 Sobic004G072100 Sobic004G325400--Sobic004G072100 Sobic008G127400 Sobic008G127400 Sobic004G325400--Sobic008G127400 Sobic004G283000 Sobic004G283000 Sobic002G388200--Sobic004G283000 Sobic009G056800 Sobic009G056800 Sobic002G388200--Sobic009G056800 Sobic006G173100 Sobic006G173100 Sobic002G388200--Sobic006G173100 Sobic002G388200--Sobic003G187400 Sobic001G466700 Sobic001G466700 Sobic002G388200--Sobic001G466700 Sobic007G118200 Sobic007G118200 Sobic002G388200--Sobic007G118200 Sobic008G174300 Sobic008G174300 Sobic002G388200--Sobic008G174300 Sobic008G129100 Sobic008G129100 Sobic002G388200--Sobic008G129100 Sobic002G388200--Sobic003G081000 Sobic001G409600--Sobic003G397800 Sobic001G409600--Sobic010G101800 Sobic001G409600--Sobic002G297200 Sobic001G109800 Sobic001G109800 Sobic001G409600--Sobic001G109800 Sobic001G125200 Sobic001G125200 Sobic001G409600--Sobic001G125200 Sobic007G096000 Sobic007G096000 Sobic001G409600--Sobic007G096000 Sobic009G249200 Sobic009G249200 Sobic001G409600--Sobic009G249200 Sobic001G409600--Sobic003G187400 Sobic001G016000 Sobic001G016000 Sobic001G409600--Sobic001G016000 Sobic003G081000--Sobic007G118200 Sobic003G081000--Sobic008G174300 Sobic002G034600 Sobic002G034600 Sobic003G081000--Sobic002G034600 Sobic003G081000--Sobic004G205600 Sobic009G198100 Sobic009G198100 Sobic003G081000--Sobic009G198100 Sobic006G252700 Sobic006G252700 Sobic003G081000--Sobic006G252700 Sobic010G033400 Sobic010G033400 Sobic003G081000--Sobic010G033400 Sobic003G081000--Sobic001G466700 Sobic004G350100 Sobic004G350100 Sobic003G081000--Sobic004G350100
Octagon: transcription factors


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