Gene annotation
Transcriptome id Sobic.009G178800.1
Synonym AREB3, Sb09g023920, DPBF3
Functional annotation bZIP transcription factor, putative, expressed
UniProt C5YZX9
Pfam PF00170
Panther DB PTHR22952 PTHR22952:SF178
NCBI CDD -
KEGG Orthology K14432; ABA responsive element binding factor
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT3G56850 : ABA-responsive element binding protein 3
RAP-DB (Rice) LOC_Os05g41070.1 : bZIP transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a037827
Brachypodium -
Barley HORVU3Hr1G079640.3 , HORVU3Hr1G079640.1 , HORVU3Hr1G079640.6 , HORVU3Hr1G079640.5 , HORVU3Hr1G079640.4
Wheat TraesCS3D02G330300 , TraesCS3A02G337200
Populus -


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cDNA sequences
Sobic.009G178800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G248400 ENT domain containing protein, expressed -
2 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
3 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
4 Sobic.006G183800 KH domain containing protein, putative, expressed K13095: splicing factor 1
5 Sobic.006G032400 expressed protein -
6 Sobic.002G320500 MYB family transcription factor, putative, expressed -
7 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
8 Sobic.002G144933 - -
9 Sobic.003G084900 expressed protein -
10 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
11 Sobic.001G477800 expressed protein -
12 Sobic.001G094000 expressed protein -
13 Sobic.007G227000 riboflavin biosynthesis protein ribAB, chloroplast precursor, putative, expressed K14652: 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II
14 Sobic.003G268300 surp module family protein, putative, expressed -
15 Sobic.001G544200 endonuclease, putative, expressed K10848: ERCC4, DNA excision repair protein ERCC-4
16 Sobic.001G111900 - -
17 Sobic.001G274200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
18 Sobic.002G151600 R-interacting factor 1, putative, expressed -
19 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
20 Sobic.008G078100 EDM2, putative, expressed -


Gene co-expression network
sample Sobic009G178800 Sobic009G178800 Sobic002G248400 Sobic002G248400 Sobic009G178800--Sobic002G248400 Sobic008G054500 Sobic008G054500 Sobic009G178800--Sobic008G054500 Sobic002G157000 Sobic002G157000 Sobic009G178800--Sobic002G157000 Sobic006G183800 Sobic006G183800 Sobic009G178800--Sobic006G183800 Sobic006G032400 Sobic006G032400 Sobic009G178800--Sobic006G032400 Sobic002G320500 Sobic002G320500 Sobic009G178800--Sobic002G320500 Sobic001G420200 Sobic001G420200 Sobic009G178800--Sobic001G420200 Sobic002G144933 Sobic002G144933 Sobic009G178800--Sobic002G144933 Sobic003G084900 Sobic003G084900 Sobic009G178800--Sobic003G084900 Sobic002G248400--Sobic002G157000 Sobic003G108700 Sobic003G108700 Sobic002G248400--Sobic003G108700 Sobic003G268300 Sobic003G268300 Sobic002G248400--Sobic003G268300 Sobic002G248400--Sobic001G420200 Sobic002G248400--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G248400--Sobic003G200200 Sobic002G248400--Sobic006G032400 Sobic001G090400 Sobic001G090400 Sobic002G248400--Sobic001G090400 Sobic004G257400 Sobic004G257400 Sobic002G248400--Sobic004G257400 Sobic008G173900 Sobic008G173900 Sobic008G054500--Sobic008G173900 Sobic008G054500--Sobic003G200200 Sobic008G054500--Sobic003G268300 Sobic008G054500--Sobic002G248400 Sobic008G078100 Sobic008G078100 Sobic008G054500--Sobic008G078100 Sobic008G054500--Sobic002G157000 Sobic003G445400 Sobic003G445400 Sobic008G054500--Sobic003G445400 Sobic007G185900 Sobic007G185900 Sobic008G054500--Sobic007G185900 Sobic003G397800 Sobic003G397800 Sobic008G054500--Sobic003G397800 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic002G157000--Sobic001G420200 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic002G157000--Sobic003G108700 Sobic001G094000 Sobic001G094000 Sobic002G157000--Sobic001G094000 Sobic006G183800--Sobic001G094000 Sobic003G187400 Sobic003G187400 Sobic006G183800--Sobic003G187400 Sobic006G183800--Sobic009G178800 Sobic006G183800--Sobic008G054500 Sobic009G040700 Sobic009G040700 Sobic006G183800--Sobic009G040700 Sobic006G183800--Sobic003G084900 Sobic006G183800--Sobic008G078100 Sobic001G409600 Sobic001G409600 Sobic006G183800--Sobic001G409600 Sobic006G183800--Sobic002G157000 Sobic006G032400--Sobic002G320500 Sobic006G032400--Sobic002G248400 Sobic005G015900 Sobic005G015900 Sobic006G032400--Sobic005G015900 Sobic003G241200 Sobic003G241200 Sobic006G032400--Sobic003G241200 Sobic009G210500 Sobic009G210500 Sobic006G032400--Sobic009G210500 Sobic006G032400--Sobic001G090400 Sobic006G173100 Sobic006G173100 Sobic006G032400--Sobic006G173100 Sobic004G271000 Sobic004G271000 Sobic006G032400--Sobic004G271000 Sobic006G032400--Sobic001G094000 Sobic002G320500--Sobic002G157000 Sobic002G320500--Sobic002G248400 Sobic009G065100 Sobic009G065100 Sobic002G320500--Sobic009G065100 Sobic002G320500--Sobic009G210500 Sobic006G133800 Sobic006G133800 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic002G320500--Sobic006G032400 Sobic009G000500 Sobic009G000500 Sobic002G320500--Sobic009G000500 Sobic002G320500--Sobic001G090400 Sobic001G274200 Sobic001G274200 Sobic001G420200--Sobic001G274200 Sobic001G420200--Sobic002G157000 Sobic001G420200--Sobic003G268300 Sobic001G420200--Sobic008G173900 Sobic001G420200--Sobic002G248400 Sobic007G096600 Sobic007G096600 Sobic001G420200--Sobic007G096600 Sobic007G037900 Sobic007G037900 Sobic001G420200--Sobic007G037900 Sobic001G420200--Sobic002G144933 Sobic007G178700 Sobic007G178700 Sobic001G420200--Sobic007G178700 Sobic002G144933--Sobic008G173900 Sobic002G144933--Sobic002G157000 Sobic002G144933--Sobic001G420200 Sobic002G144933--Sobic003G268300 Sobic002G144933--Sobic001G274200 Sobic002G144933--Sobic007G037900 Sobic004G145500 Sobic004G145500 Sobic002G144933--Sobic004G145500 Sobic003G170100 Sobic003G170100 Sobic002G144933--Sobic003G170100 Sobic002G144933--Sobic009G065100 Sobic010G056000 Sobic010G056000 Sobic003G084900--Sobic010G056000 Sobic007G096000 Sobic007G096000 Sobic003G084900--Sobic007G096000 Sobic010G028800 Sobic010G028800 Sobic003G084900--Sobic010G028800 Sobic003G084900--Sobic008G173900 Sobic003G084900--Sobic008G054500 Sobic006G165000 Sobic006G165000 Sobic003G084900--Sobic006G165000 Sobic003G084900--Sobic002G144933 Sobic001G111900 Sobic001G111900 Sobic003G084900--Sobic001G111900 Sobic003G084900--Sobic003G268300
Octagon: transcription factors


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