Gene annotation
Transcriptome id Sobic.006G032400.1,Sobic.006G032400.2
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RBW4 , A0A1Z5RCN9
Pfam -
Panther DB PTHR14571 PTHR14571:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G32810 : RING/FYVE/PHD zinc finger superfamily protein
RAP-DB (Rice) LOC_Os04g14510.2 : expressed protein
MaizeGDB (Corn) Zm00025a011980
Brachypodium KQJ81972 , PNT60767
Barley HORVU2Hr1G011100.3 , HORVU2Hr1G011100.2 , HORVU2Hr1G011100.1 , HORVU2Hr1G011100.7 , HORVU2Hr1G011100.6 , HORVU2Hr1G011100.5 , HORVU2Hr1G011100.4 , HORVU2Hr1G011100.9 , HORVU2Hr1G011100.8 , HORVU2Hr1G011100.13 , HORVU2Hr1G011100.12 , HORVU2Hr1G011100.11 , HORVU2Hr1G011100.10 , HORVU2Hr1G011100.17 , HORVU2Hr1G011100.16 , HORVU2Hr1G011100.15 , HORVU2Hr1G011100.14
Wheat TraesCS2A02G064600 , TraesCS2A02G064600 , TraesCS2D02G062900 , TraesCS2D02G062900 , TraesCS2D02G062900 , TraesCS2D02G062900 , TraesCS2D02G062900 , TraesCS2D02G062900 , TraesCS2D02G062900 , TraesCS2B02G076800 , TraesCS2B02G076800 , TraesCS2B02G076800
Populus -


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cDNA sequences
Sobic.006G032400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G320500 MYB family transcription factor, putative, expressed -
2 Sobic.002G248400 ENT domain containing protein, expressed -
3 Sobic.005G015900 dnaJ domain containing protein, expressed -
4 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
5 Sobic.009G210500 expressed protein -
6 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
7 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
8 Sobic.004G271000 expressed protein -
9 Sobic.001G094000 expressed protein -
10 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
11 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
12 Sobic.004G213000 AT hook motif family protein, expressed -
13 Sobic.004G031700 expressed protein -
14 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
15 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
16 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
17 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
18 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
19 Sobic.008G100100 MYB family transcription factor, putative, expressed K12860: CDC5L, CDC5, pre-mRNA-splicing factor CDC5/CEF1
20 Sobic.008G153000 MATH domain containing protein, expressed -


Gene co-expression network
sample Sobic006G032400 Sobic006G032400 Sobic002G320500 Sobic002G320500 Sobic006G032400--Sobic002G320500 Sobic002G248400 Sobic002G248400 Sobic006G032400--Sobic002G248400 Sobic005G015900 Sobic005G015900 Sobic006G032400--Sobic005G015900 Sobic003G241200 Sobic003G241200 Sobic006G032400--Sobic003G241200 Sobic009G210500 Sobic009G210500 Sobic006G032400--Sobic009G210500 Sobic001G090400 Sobic001G090400 Sobic006G032400--Sobic001G090400 Sobic006G173100 Sobic006G173100 Sobic006G032400--Sobic006G173100 Sobic004G271000 Sobic004G271000 Sobic006G032400--Sobic004G271000 Sobic001G094000 Sobic001G094000 Sobic006G032400--Sobic001G094000 Sobic002G157000 Sobic002G157000 Sobic002G320500--Sobic002G157000 Sobic002G320500--Sobic002G248400 Sobic009G065100 Sobic009G065100 Sobic002G320500--Sobic009G065100 Sobic002G320500--Sobic009G210500 Sobic006G133800 Sobic006G133800 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic002G320500--Sobic006G032400 Sobic009G000500 Sobic009G000500 Sobic002G320500--Sobic009G000500 Sobic002G320500--Sobic001G090400 Sobic002G248400--Sobic002G157000 Sobic003G108700 Sobic003G108700 Sobic002G248400--Sobic003G108700 Sobic003G268300 Sobic003G268300 Sobic002G248400--Sobic003G268300 Sobic001G420200 Sobic001G420200 Sobic002G248400--Sobic001G420200 Sobic002G248400--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G248400--Sobic003G200200 Sobic002G248400--Sobic006G032400 Sobic002G248400--Sobic001G090400 Sobic004G257400 Sobic004G257400 Sobic002G248400--Sobic004G257400 Sobic005G015900--Sobic006G032400 Sobic004G031700 Sobic004G031700 Sobic005G015900--Sobic004G031700 Sobic004G219100 Sobic004G219100 Sobic005G015900--Sobic004G219100 Sobic001G176200 Sobic001G176200 Sobic005G015900--Sobic001G176200 Sobic005G015900--Sobic002G320500 Sobic005G015900--Sobic001G090400 Sobic002G158700 Sobic002G158700 Sobic005G015900--Sobic002G158700 Sobic001G303675 Sobic001G303675 Sobic005G015900--Sobic001G303675 Sobic003G445400 Sobic003G445400 Sobic005G015900--Sobic003G445400 Sobic004G084300 Sobic004G084300 Sobic003G241200--Sobic004G084300 Sobic006G165000 Sobic006G165000 Sobic003G241200--Sobic006G165000 Sobic003G241200--Sobic006G032400 Sobic003G241200--Sobic002G248400 Sobic003G241200--Sobic002G320500 Sobic003G173950 Sobic003G173950 Sobic003G241200--Sobic003G173950 Sobic010G236400 Sobic010G236400 Sobic003G241200--Sobic010G236400 Sobic003G241200--Sobic003G200200 Sobic003G241200--Sobic002G157000 Sobic009G210500--Sobic002G320500 Sobic007G065400 Sobic007G065400 Sobic009G210500--Sobic007G065400 Sobic009G210500--Sobic002G157000 Sobic009G210500--Sobic006G032400 Sobic009G210500--Sobic003G268300 Sobic001G407200 Sobic001G407200 Sobic009G210500--Sobic001G407200 Sobic007G167500 Sobic007G167500 Sobic009G210500--Sobic007G167500 Sobic009G210500--Sobic001G090400 Sobic004G145500 Sobic004G145500 Sobic009G210500--Sobic004G145500 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic001G090400--Sobic002G248400 Sobic006G173100--Sobic001G090400 Sobic006G173100--Sobic002G157300 Sobic003G187400 Sobic003G187400 Sobic006G173100--Sobic003G187400 Sobic002G197100 Sobic002G197100 Sobic006G173100--Sobic002G197100 Sobic004G021100 Sobic004G021100 Sobic006G173100--Sobic004G021100 Sobic006G173100--Sobic006G032400 Sobic001G512700 Sobic001G512700 Sobic006G173100--Sobic001G512700 Sobic004G067700 Sobic004G067700 Sobic006G173100--Sobic004G067700 Sobic002G370900 Sobic002G370900 Sobic006G173100--Sobic002G370900 Sobic004G213000 Sobic004G213000 Sobic004G271000--Sobic004G213000 Sobic010G201500 Sobic010G201500 Sobic004G271000--Sobic010G201500 Sobic004G271000--Sobic006G032400 Sobic010G069100 Sobic010G069100 Sobic004G271000--Sobic010G069100 Sobic004G271000--Sobic002G248400 Sobic001G206100 Sobic001G206100 Sobic004G271000--Sobic001G206100 Sobic007G000100 Sobic007G000100 Sobic004G271000--Sobic007G000100 Sobic004G271000--Sobic008G067600 Sobic003G397800 Sobic003G397800 Sobic004G271000--Sobic003G397800 Sobic007G011400 Sobic007G011400 Sobic001G094000--Sobic007G011400 Sobic009G040700 Sobic009G040700 Sobic001G094000--Sobic009G040700 Sobic001G477800 Sobic001G477800 Sobic001G094000--Sobic001G477800 Sobic001G094000--Sobic002G157000 Sobic001G094000--Sobic003G268300 Sobic001G094000--Sobic002G157300 Sobic001G094000--Sobic003G187400 Sobic001G094000--Sobic004G031700 Sobic006G080300 Sobic006G080300 Sobic001G094000--Sobic006G080300
Octagon: transcription factors


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