Gene annotation
Transcriptome id Sobic.002G248400.1
Synonym Sb02g028450
Functional annotation ENT domain containing protein, expressed
UniProt C5X3Y1
Pfam PF03735
Panther DB PTHR33432 PTHR33432:SF1
NCBI CDD KOG4675; Uncharacterized conserved protein, contains ENT domain
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G13020 : Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein
RAP-DB (Rice) LOC_Os04g56440.1 : ENT domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033813 , Zm00025a014215 , Zm00025a047458
Brachypodium KQJ90770 , KQJ90768 , KQJ90767 , KQJ90769
Barley HORVU5Hr1G073510.13 , HORVU5Hr1G073510.12 , HORVU5Hr1G073510.11 , HORVU5Hr1G073510.10 , HORVU5Hr1G073510.15 , HORVU5Hr1G073510.14 , HORVU5Hr1G073510.3 , HORVU5Hr1G073510.2 , HORVU5Hr1G073510.1 , HORVU5Hr1G073510.7 , HORVU5Hr1G073510.6 , HORVU5Hr1G073510.5 , HORVU5Hr1G073510.4 , HORVU5Hr1G073510.9 , HORVU5Hr1G073510.8
Wheat TraesCS5B02G266000 , TraesCS5B02G266000 , TraesCS5A02G266400 , TraesCS5D02G274200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
2 Sobic.003G108700 RNA recognition motif, putative, expressed -
3 Sobic.003G268300 surp module family protein, putative, expressed -
4 Sobic.001G420200 RNA recognition motif containing protein, putative, expressed K11093: U1 small nuclear ribonucleoprotein 70kDa
5 Sobic.002G320500 MYB family transcription factor, putative, expressed -
6 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
7 Sobic.006G032400 expressed protein -
8 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
9 Sobic.004G257400 WD-40 repeat family protein, putative, expressed -
10 Sobic.007G096600 - -
11 Sobic.003G298100 one zinc finger protein, putative, expressed -
12 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
13 Sobic.003G422300 recA protein, expressed K03553: recombination protein RecA
14 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.006G133800 myb-like DNA-binding domain containing protein, expressed -
16 Sobic.003G241200 nucampholin, putative, expressed K13100: pre-mRNA-splicing factor CWC22
17 Sobic.009G178800 bZIP transcription factor, putative, expressed K14432: ABA responsive element binding factor
18 Sobic.001G251700 OsPP2Ac-4 - Phosphatase 2A isoform 4 belonging to family 2, expressed K04382: serine/threonine-protein phosphatase 2A catalytic subunit
19 Sobic.001G162300 KH domain containing protein, putative, expressed K13162: poly(rC)-binding protein 2
20 Sobic.001G206100 expressed protein -


Gene co-expression network
sample Sobic002G248400 Sobic002G248400 Sobic002G157000 Sobic002G157000 Sobic002G248400--Sobic002G157000 Sobic003G108700 Sobic003G108700 Sobic002G248400--Sobic003G108700 Sobic003G268300 Sobic003G268300 Sobic002G248400--Sobic003G268300 Sobic001G420200 Sobic001G420200 Sobic002G248400--Sobic001G420200 Sobic002G320500 Sobic002G320500 Sobic002G248400--Sobic002G320500 Sobic003G200200 Sobic003G200200 Sobic002G248400--Sobic003G200200 Sobic006G032400 Sobic006G032400 Sobic002G248400--Sobic006G032400 Sobic001G090400 Sobic001G090400 Sobic002G248400--Sobic001G090400 Sobic004G257400 Sobic004G257400 Sobic002G248400--Sobic004G257400 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic001G162300 Sobic001G162300 Sobic002G157000--Sobic001G162300 Sobic002G157000--Sobic003G108700 Sobic001G094000 Sobic001G094000 Sobic002G157000--Sobic001G094000 Sobic003G108700--Sobic002G248400 Sobic003G108700--Sobic002G157000 Sobic003G108700--Sobic003G268300 Sobic003G108700--Sobic004G257400 Sobic007G126600 Sobic007G126600 Sobic003G108700--Sobic007G126600 Sobic003G108700--Sobic001G420200 Sobic003G108700--Sobic008G173900 Sobic003G108700--Sobic003G200200 Sobic007G167500 Sobic007G167500 Sobic003G108700--Sobic007G167500 Sobic007G096600 Sobic007G096600 Sobic003G268300--Sobic007G096600 Sobic003G268300--Sobic002G157000 Sobic003G268300--Sobic001G420200 Sobic003G268300--Sobic003G200200 Sobic003G268300--Sobic002G248400 Sobic009G127900 Sobic009G127900 Sobic003G268300--Sobic009G127900 Sobic007G178700 Sobic007G178700 Sobic003G268300--Sobic007G178700 Sobic007G037900 Sobic007G037900 Sobic003G268300--Sobic007G037900 Sobic003G268300--Sobic008G173900 Sobic001G274200 Sobic001G274200 Sobic001G420200--Sobic001G274200 Sobic001G420200--Sobic002G157000 Sobic001G420200--Sobic003G268300 Sobic001G420200--Sobic008G173900 Sobic001G420200--Sobic002G248400 Sobic001G420200--Sobic007G096600 Sobic001G420200--Sobic007G037900 Sobic002G144933 Sobic002G144933 Sobic001G420200--Sobic002G144933 Sobic001G420200--Sobic007G178700 Sobic002G320500--Sobic002G157000 Sobic002G320500--Sobic002G248400 Sobic009G065100 Sobic009G065100 Sobic002G320500--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic002G320500--Sobic009G210500 Sobic006G133800 Sobic006G133800 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic002G320500--Sobic006G032400 Sobic009G000500 Sobic009G000500 Sobic002G320500--Sobic009G000500 Sobic002G320500--Sobic001G090400 Sobic003G200200--Sobic002G157000 Sobic002G006900 Sobic002G006900 Sobic003G200200--Sobic002G006900 Sobic003G200200--Sobic003G268300 Sobic001G251700 Sobic001G251700 Sobic003G200200--Sobic001G251700 Sobic003G200200--Sobic007G096600 Sobic003G200200--Sobic002G248400 Sobic001G155000 Sobic001G155000 Sobic003G200200--Sobic001G155000 Sobic003G200200--Sobic008G173900 Sobic003G170100 Sobic003G170100 Sobic003G200200--Sobic003G170100 Sobic006G032400--Sobic002G320500 Sobic006G032400--Sobic002G248400 Sobic005G015900 Sobic005G015900 Sobic006G032400--Sobic005G015900 Sobic003G241200 Sobic003G241200 Sobic006G032400--Sobic003G241200 Sobic006G032400--Sobic009G210500 Sobic006G032400--Sobic001G090400 Sobic006G173100 Sobic006G173100 Sobic006G032400--Sobic006G173100 Sobic004G271000 Sobic004G271000 Sobic006G032400--Sobic004G271000 Sobic006G032400--Sobic001G094000 Sobic008G067600 Sobic008G067600 Sobic001G090400--Sobic008G067600 Sobic001G090400--Sobic006G173100 Sobic004G057400 Sobic004G057400 Sobic001G090400--Sobic004G057400 Sobic001G176200 Sobic001G176200 Sobic001G090400--Sobic001G176200 Sobic001G090400--Sobic002G320500 Sobic001G090400--Sobic009G000500 Sobic002G157300 Sobic002G157300 Sobic001G090400--Sobic002G157300 Sobic004G205600 Sobic004G205600 Sobic001G090400--Sobic004G205600 Sobic001G090400--Sobic002G248400 Sobic004G257400--Sobic002G248400 Sobic004G257400--Sobic003G108700 Sobic008G054500 Sobic008G054500 Sobic004G257400--Sobic008G054500 Sobic003G445400 Sobic003G445400 Sobic004G257400--Sobic003G445400 Sobic007G026300 Sobic007G026300 Sobic004G257400--Sobic007G026300 Sobic003G073000 Sobic003G073000 Sobic004G257400--Sobic003G073000 Sobic004G257400--Sobic001G090400 Sobic004G257400--Sobic007G167500 Sobic004G257400--Sobic001G251700
Octagon: transcription factors


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