Gene annotation
Transcriptome id Sobic.001G206100.2,Sobic.001G206100.1
Synonym Sb01g018220
Functional annotation expressed protein
UniProt A0A1B6QK00 , A0A1B6QK25
Pfam PF07814
Panther DB PTHR22100 PTHR22100:SF13
NCBI CDD KOG2152; Sister chromatid cohesion protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G11060 : WAPL (Wings apart-like protein regulation of heterochromatin) protein
RAP-DB (Rice) LOC_Os10g35380.1 : expressed protein
MaizeGDB (Corn) Zm00025a030336 , Zm00025a030337 , Zm00025a006460 , Zm00025a017502
Brachypodium KQJ97292
Barley HORVU1Hr1G044590.5 , HORVU1Hr1G044590.4 , HORVU1Hr1G044590.6 , HORVU1Hr1G044590.1 , HORVU1Hr1G044590.3 , HORVU1Hr1G044590.2 , HORVU1Hr1G044590.9 , HORVU1Hr1G044590.8 , HORVU1Hr1G044590.11 , HORVU1Hr1G044590.10 , HORVU1Hr1G044590.13 , HORVU1Hr1G044590.12 , HORVU1Hr1G044590.7
Wheat TraesCS1A02G171100 , TraesCS1A02G171100 , TraesCS1D02G168800 , TraesCS1D02G168800 , TraesCS1D02G168800 , TraesCS1D02G168800 , TraesCS1D02G168800 , TraesCS1D02G168800 , TraesCS1D02G168800 , TraesCS1B02G186200 , TraesCS1B02G186200 , TraesCS1B02G186200 , TraesCS1B02G186200 , TraesCS1B02G186200 , TraesCS1B02G186200 , TraesCS1A02G171100 , TraesCS1A02G171100 , TraesCS1A02G171100 , TraesCS1B02G186200 , TraesCS1B02G186200 , TraesCS1A02G171100 , TraesCS1A02G171100
Populus -


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cDNA sequences
Sobic.001G206100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G257300 OsFBL52 - F-box domain and LRR containing protein, expressed -
2 Sobic.006G013500 hydrolase/ zinc ion binding protein, putative, expressed K15442: TAD3, tRNA-specific adenosine deaminase 3
3 Sobic.002G320500 MYB family transcription factor, putative, expressed -
4 Sobic.006G080300 SET domain containing protein, expressed -
5 Sobic.002G157000 enhancer of polycomb, putative, expressed K11322: enhancer of polycomb-like protein
6 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
7 Sobic.004G213000 AT hook motif family protein, expressed -
8 Sobic.001G356500 polypyrimidine tract-binding protein, putative, expressed K14948: PTBP2, polypyrimidine tract-binding protein 2
9 Sobic.002G161000 RNA recognition motif containing protein, expressed -
10 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
11 Sobic.002G248400 ENT domain containing protein, expressed -
12 Sobic.007G185900 IBR domain containing protein, putative, expressed K11968: ariadne-1
13 Sobic.006G046700 vacuolar protein sorting-associated protein 11, putative, expressed -
14 Sobic.004G271000 expressed protein -
15 Sobic.004G349900 -(PubMedID : 27329702)@expressed protein -
16 Sobic.003G197800 peptidyl-prolyl cis-trans isomerase, putative, expressed K12737: peptidyl-prolyl cis-trans isomerase SDCCAG10
17 Sobic.003G200200 SIT4 phosphatase-associated protein domain containing protein, expressed K15501: PPP6R3, serine/threonine-protein phosphatase 6 regulatory subunit 3
18 Sobic.003G073000 IWS1 C-terminus family protein, putative, expressed K17498: SPN1, transcription factor SPN1
19 Sobic.004G031700 expressed protein -
20 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -


Gene co-expression network
sample Sobic001G206100 Sobic001G206100 Sobic001G257300 Sobic001G257300 Sobic001G206100--Sobic001G257300 Sobic006G013500 Sobic006G013500 Sobic001G206100--Sobic006G013500 Sobic002G320500 Sobic002G320500 Sobic001G206100--Sobic002G320500 Sobic006G080300 Sobic006G080300 Sobic001G206100--Sobic006G080300 Sobic002G157000 Sobic002G157000 Sobic001G206100--Sobic002G157000 Sobic009G000500 Sobic009G000500 Sobic001G206100--Sobic009G000500 Sobic004G213000 Sobic004G213000 Sobic001G206100--Sobic004G213000 Sobic001G356500 Sobic001G356500 Sobic001G206100--Sobic001G356500 Sobic002G161000 Sobic002G161000 Sobic001G206100--Sobic002G161000 Sobic001G257300--Sobic001G206100 Sobic001G257300--Sobic006G013500 Sobic003G170100 Sobic003G170100 Sobic001G257300--Sobic003G170100 Sobic001G257300--Sobic006G080300 Sobic003G200200 Sobic003G200200 Sobic001G257300--Sobic003G200200 Sobic002G001600 Sobic002G001600 Sobic001G257300--Sobic002G001600 Sobic001G257300--Sobic004G213000 Sobic001G257300--Sobic002G161000 Sobic001G162300 Sobic001G162300 Sobic001G257300--Sobic001G162300 Sobic006G013500--Sobic001G206100 Sobic006G013500--Sobic001G257300 Sobic001G306900 Sobic001G306900 Sobic006G013500--Sobic001G306900 Sobic006G013500--Sobic006G080300 Sobic004G031700 Sobic004G031700 Sobic006G013500--Sobic004G031700 Sobic006G013500--Sobic009G000500 Sobic003G197800 Sobic003G197800 Sobic006G013500--Sobic003G197800 Sobic001G094000 Sobic001G094000 Sobic006G013500--Sobic001G094000 Sobic006G046700 Sobic006G046700 Sobic006G013500--Sobic006G046700 Sobic002G320500--Sobic002G157000 Sobic002G248400 Sobic002G248400 Sobic002G320500--Sobic002G248400 Sobic009G065100 Sobic009G065100 Sobic002G320500--Sobic009G065100 Sobic009G210500 Sobic009G210500 Sobic002G320500--Sobic009G210500 Sobic006G133800 Sobic006G133800 Sobic002G320500--Sobic006G133800 Sobic001G107500 Sobic001G107500 Sobic002G320500--Sobic001G107500 Sobic006G032400 Sobic006G032400 Sobic002G320500--Sobic006G032400 Sobic002G320500--Sobic009G000500 Sobic001G090400 Sobic001G090400 Sobic002G320500--Sobic001G090400 Sobic003G268300 Sobic003G268300 Sobic006G080300--Sobic003G268300 Sobic006G080300--Sobic004G031700 Sobic006G080300--Sobic001G094000 Sobic001G477800 Sobic001G477800 Sobic006G080300--Sobic001G477800 Sobic002G313300 Sobic002G313300 Sobic006G080300--Sobic002G313300 Sobic006G080300--Sobic001G206100 Sobic006G080300--Sobic002G157000 Sobic006G080300--Sobic003G170100 Sobic006G080300--Sobic001G257300 Sobic002G157000--Sobic002G248400 Sobic002G157000--Sobic002G320500 Sobic002G157000--Sobic003G200200 Sobic001G420200 Sobic001G420200 Sobic002G157000--Sobic001G420200 Sobic008G173900 Sobic008G173900 Sobic002G157000--Sobic008G173900 Sobic002G157000--Sobic003G268300 Sobic002G157000--Sobic001G162300 Sobic003G108700 Sobic003G108700 Sobic002G157000--Sobic003G108700 Sobic002G157000--Sobic001G094000 Sobic009G000500--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic009G000500--Sobic003G445400 Sobic009G000500--Sobic002G320500 Sobic006G128900 Sobic006G128900 Sobic009G000500--Sobic006G128900 Sobic009G000500--Sobic006G133800 Sobic009G000500--Sobic001G090400 Sobic003G307000 Sobic003G307000 Sobic009G000500--Sobic003G307000 Sobic009G000500--Sobic008G173900 Sobic009G000500--Sobic001G206100 Sobic004G271000 Sobic004G271000 Sobic004G213000--Sobic004G271000 Sobic004G213000--Sobic001G206100 Sobic004G213000--Sobic006G032400 Sobic004G213000--Sobic006G080300 Sobic004G213000--Sobic002G248400 Sobic004G213000--Sobic003G108700 Sobic004G213000--Sobic002G157000 Sobic002G151600 Sobic002G151600 Sobic004G213000--Sobic002G151600 Sobic004G213000--Sobic001G257300 Sobic003G173950 Sobic003G173950 Sobic001G356500--Sobic003G173950 Sobic001G356500--Sobic001G206100 Sobic007G065400 Sobic007G065400 Sobic001G356500--Sobic007G065400 Sobic002G264200 Sobic002G264200 Sobic001G356500--Sobic002G264200 Sobic001G356500--Sobic002G320500 Sobic001G356500--Sobic003G170100 Sobic002G121600 Sobic002G121600 Sobic001G356500--Sobic002G121600 Sobic001G356500--Sobic001G257300 Sobic001G356500--Sobic002G161000 Sobic002G161000--Sobic001G206100 Sobic007G137900 Sobic007G137900 Sobic002G161000--Sobic007G137900 Sobic002G161000--Sobic003G200200 Sobic002G161000--Sobic001G094000 Sobic002G161000--Sobic001G257300 Sobic002G161000--Sobic003G170100 Sobic002G161000--Sobic001G306900 Sobic002G161000--Sobic006G046700 Sobic001G251700 Sobic001G251700 Sobic002G161000--Sobic001G251700
Octagon: transcription factors


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