Gene annotation
Transcriptome id Sobic.003G445400.1,Sobic.003G445400.3,Sobic.003G445400.4
Synonym Sb03g047480
Functional annotation vacuolar fusion protein MON1 homolog A, putative, expressed
UniProt A0A1W0W1K6 , A0A1B6Q8H9
Pfam PF03164
Panther DB PTHR13027 PTHR13027:SF7
NCBI CDD KOG0997; Uncharacterized conserved protein Sand
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G28390 : SAND family protein
RAP-DB (Rice) LOC_Os01g74460.2 : vacuolar fusion protein MON1 homolog A, putative, expressed
MaizeGDB (Corn) Zm00025a025814
Brachypodium KQK11810 , KQK11811 , KQK11812
Barley HORVU3Hr1G116880.20 , HORVU3Hr1G116880.21 , HORVU3Hr1G116880.15 , HORVU3Hr1G116880.14 , HORVU3Hr1G116880.16 , HORVU3Hr1G116880.11 , HORVU3Hr1G116880.10 , HORVU3Hr1G116880.13 , HORVU3Hr1G116880.12 , HORVU3Hr1G116880.19 , HORVU3Hr1G116880.18 , HORVU3Hr1G116880.1 , HORVU3Hr1G116880.3 , HORVU3Hr1G116880.2 , HORVU3Hr1G116880.5 , HORVU3Hr1G116880.4 , HORVU3Hr1G116880.7 , HORVU3Hr1G116880.9 , HORVU3Hr1G116880.8
Wheat TraesCS3B02G608200 , TraesCS3A02G535700 , TraesCS3A02G535700 , TraesCS6D02G345900 , TraesCS6D02G345900 , TraesCS6A02G362600 , TraesCS3D02G541200 , TraesCS6B02G396200 , TraesCS6B02G396200
Populus -


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cDNA sequences
Sobic.003G445400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G031700 expressed protein -
2 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
3 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
4 Sobic.003G307000 RNA recognition motif containing protein, expressed K18667: activating signal cointegrator complex subunit 2
5 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
6 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
7 Sobic.007G096000 expressed protein -
8 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
9 Sobic.008G153000 MATH domain containing protein, expressed -
10 Sobic.003G397800 - K12823: DDX5, ATP-dependent RNA helicase DDX5/DBP2
11 Sobic.005G045300 PX domain containing protein, putative, expressed K17925: sorting nexin-13
12 Sobic.001G090400 PHD-finger domain containing protein, putative, expressed K11346: inhibitor of growth protein 4
13 Sobic.007G000100 PWWP domain containing protein, expressed -
14 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.003G394300 tetratricopeptide repeat domain containing protein, expressed -
16 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
17 Sobic.006G032400 expressed protein -
18 Sobic.002G320500 MYB family transcription factor, putative, expressed -
19 Sobic.006G173100 pre-mRNA-processing factor 31, putative, expressed K12844: U4/U6 small nuclear ribonucleoprotein PRP31
20 Sobic.004G257400 WD-40 repeat family protein, putative, expressed -


Gene co-expression network
sample Sobic003G445400 Sobic003G445400 Sobic004G031700 Sobic004G031700 Sobic003G445400--Sobic004G031700 Sobic009G000500 Sobic009G000500 Sobic003G445400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic003G445400--Sobic008G067600 Sobic003G307000 Sobic003G307000 Sobic003G445400--Sobic003G307000 Sobic002G158700 Sobic002G158700 Sobic003G445400--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic003G445400--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic003G445400--Sobic007G096000 Sobic001G511500 Sobic001G511500 Sobic003G445400--Sobic001G511500 Sobic008G153000 Sobic008G153000 Sobic003G445400--Sobic008G153000 Sobic004G031700--Sobic009G000500 Sobic004G031700--Sobic003G445400 Sobic001G544200 Sobic001G544200 Sobic004G031700--Sobic001G544200 Sobic001G477800 Sobic001G477800 Sobic004G031700--Sobic001G477800 Sobic006G080300 Sobic006G080300 Sobic004G031700--Sobic006G080300 Sobic004G031700--Sobic006G128900 Sobic001G094000 Sobic001G094000 Sobic004G031700--Sobic001G094000 Sobic004G031700--Sobic001G511500 Sobic004G031700--Sobic002G158700 Sobic009G000500--Sobic004G031700 Sobic009G000500--Sobic003G445400 Sobic002G320500 Sobic002G320500 Sobic009G000500--Sobic002G320500 Sobic009G000500--Sobic006G128900 Sobic006G133800 Sobic006G133800 Sobic009G000500--Sobic006G133800 Sobic001G090400 Sobic001G090400 Sobic009G000500--Sobic001G090400 Sobic009G000500--Sobic003G307000 Sobic008G173900 Sobic008G173900 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic008G067600--Sobic001G090400 Sobic008G067600--Sobic003G445400 Sobic004G084300 Sobic004G084300 Sobic008G067600--Sobic004G084300 Sobic002G157300 Sobic002G157300 Sobic008G067600--Sobic002G157300 Sobic001G315100 Sobic001G315100 Sobic008G067600--Sobic001G315100 Sobic001G512700 Sobic001G512700 Sobic008G067600--Sobic001G512700 Sobic008G067600--Sobic009G000500 Sobic004G057400 Sobic004G057400 Sobic008G067600--Sobic004G057400 Sobic008G047800 Sobic008G047800 Sobic008G067600--Sobic008G047800 Sobic007G000100 Sobic007G000100 Sobic003G307000--Sobic007G000100 Sobic002G153700 Sobic002G153700 Sobic003G307000--Sobic002G153700 Sobic003G307000--Sobic003G445400 Sobic003G307000--Sobic009G000500 Sobic003G307000--Sobic001G511500 Sobic001G306900 Sobic001G306900 Sobic003G307000--Sobic001G306900 Sobic003G307000--Sobic004G031700 Sobic003G394300 Sobic003G394300 Sobic003G307000--Sobic003G394300 Sobic010G065300 Sobic010G065300 Sobic003G307000--Sobic010G065300 Sobic003G401000 Sobic003G401000 Sobic002G158700--Sobic003G401000 Sobic001G464200 Sobic001G464200 Sobic002G158700--Sobic001G464200 Sobic001G167200 Sobic001G167200 Sobic002G158700--Sobic001G167200 Sobic002G158700--Sobic004G031700 Sobic002G158700--Sobic003G445400 Sobic007G000800 Sobic007G000800 Sobic002G158700--Sobic007G000800 Sobic007G061700 Sobic007G061700 Sobic002G158700--Sobic007G061700 Sobic008G149800 Sobic008G149800 Sobic002G158700--Sobic008G149800 Sobic002G396000 Sobic002G396000 Sobic002G158700--Sobic002G396000 Sobic006G209850 Sobic006G209850 Sobic006G128900--Sobic006G209850 Sobic006G128900--Sobic001G511500 Sobic006G128900--Sobic004G031700 Sobic006G128900--Sobic009G000500 Sobic006G128900--Sobic001G090400 Sobic006G128900--Sobic003G445400 Sobic003G268300 Sobic003G268300 Sobic006G128900--Sobic003G268300 Sobic006G128900--Sobic001G477800 Sobic002G157000 Sobic002G157000 Sobic006G128900--Sobic002G157000 Sobic003G280800 Sobic003G280800 Sobic007G096000--Sobic003G280800 Sobic007G096000--Sobic003G445400 Sobic004G039700 Sobic004G039700 Sobic007G096000--Sobic004G039700 Sobic009G126400 Sobic009G126400 Sobic007G096000--Sobic009G126400 Sobic003G084900 Sobic003G084900 Sobic007G096000--Sobic003G084900 Sobic001G474600 Sobic001G474600 Sobic007G096000--Sobic001G474600 Sobic001G222500 Sobic001G222500 Sobic007G096000--Sobic001G222500 Sobic002G310200 Sobic002G310200 Sobic007G096000--Sobic002G310200 Sobic007G096000--Sobic009G000500 Sobic001G511500--Sobic007G000100 Sobic001G511500--Sobic006G209850 Sobic001G511500--Sobic006G128900 Sobic003G119000 Sobic003G119000 Sobic001G511500--Sobic003G119000 Sobic001G511500--Sobic004G031700 Sobic001G511500--Sobic001G306900 Sobic001G511500--Sobic003G445400 Sobic001G511500--Sobic003G307000 Sobic006G032400 Sobic006G032400 Sobic001G511500--Sobic006G032400 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G153000--Sobic008G149800 Sobic002G264200 Sobic002G264200 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic008G153000--Sobic003G445400 Sobic003G059750 Sobic003G059750 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic010G069100 Sobic010G069100 Sobic008G153000--Sobic010G069100
Octagon: transcription factors


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