Gene annotation
Transcriptome id Sobic.007G096000.1
Synonym Sb07g009500
Functional annotation expressed protein
UniProt C5YJW4
Pfam PF10513
Panther DB PTHR14898 PTHR14898:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006357; regulation of transcription by RNA polymerase II


Orthologs (automatic annotation)
TAIR AT5G04670 : Enhancer of polycomb-like transcription factor protein
RAP-DB (Rice) LOC_Os02g01020.1 : expressed protein
MaizeGDB (Corn) Zm00025a054593 , Zm00025a030864
Brachypodium PNT63435 , PNT63436 , PNT63437 , KQJ88130 , KQJ92722 , KQJ88129
Barley -
Wheat TraesCS6A02G000800 , TraesCS6D02G004900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
2 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
3 Sobic.004G039700 OsFBX188 - F-box domain containing protein, expressed -
4 Sobic.009G126400 glycine-rich protein, putative, expressed K14845: RAI1, RAT1-interacting protein
5 Sobic.003G084900 expressed protein -
6 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
7 Sobic.001G222500 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K14442: DHX36, ATP-dependent RNA helicase DHX36
8 Sobic.002G310200 expressed protein -
9 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
10 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
11 Sobic.008G047800 WD domain, G-beta repeat domain containing protein, expressed K15361: WDR48, WD repeat-containing protein 48
12 Sobic.007G217000 tetratricopeptide repeat domain containing protein, expressed K13342: PEX5, peroxin-5
13 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
14 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
15 Sobic.003G372700 expressed protein -
16 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
17 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
18 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
19 Sobic.001G409600 KH domain containing protein, putative, expressed K13095: splicing factor 1
20 Sobic.001G241200 protein kinase domain containing protein, expressed -


Gene co-expression network
sample Sobic007G096000 Sobic007G096000 Sobic003G280800 Sobic003G280800 Sobic007G096000--Sobic003G280800 Sobic003G445400 Sobic003G445400 Sobic007G096000--Sobic003G445400 Sobic004G039700 Sobic004G039700 Sobic007G096000--Sobic004G039700 Sobic009G126400 Sobic009G126400 Sobic007G096000--Sobic009G126400 Sobic003G084900 Sobic003G084900 Sobic007G096000--Sobic003G084900 Sobic001G474600 Sobic001G474600 Sobic007G096000--Sobic001G474600 Sobic001G222500 Sobic001G222500 Sobic007G096000--Sobic001G222500 Sobic002G310200 Sobic002G310200 Sobic007G096000--Sobic002G310200 Sobic009G000500 Sobic009G000500 Sobic007G096000--Sobic009G000500 Sobic002G309600 Sobic002G309600 Sobic003G280800--Sobic002G309600 Sobic001G071400 Sobic001G071400 Sobic003G280800--Sobic001G071400 Sobic002G134200 Sobic002G134200 Sobic003G280800--Sobic002G134200 Sobic006G209850 Sobic006G209850 Sobic003G280800--Sobic006G209850 Sobic003G119000 Sobic003G119000 Sobic003G280800--Sobic003G119000 Sobic003G280800--Sobic001G474600 Sobic007G117400 Sobic007G117400 Sobic003G280800--Sobic007G117400 Sobic006G216800 Sobic006G216800 Sobic003G280800--Sobic006G216800 Sobic003G372700 Sobic003G372700 Sobic003G280800--Sobic003G372700 Sobic004G031700 Sobic004G031700 Sobic003G445400--Sobic004G031700 Sobic003G445400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic003G445400--Sobic008G067600 Sobic003G307000 Sobic003G307000 Sobic003G445400--Sobic003G307000 Sobic002G158700 Sobic002G158700 Sobic003G445400--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic003G445400--Sobic006G128900 Sobic003G445400--Sobic007G096000 Sobic001G511500 Sobic001G511500 Sobic003G445400--Sobic001G511500 Sobic008G153000 Sobic008G153000 Sobic003G445400--Sobic008G153000 Sobic004G039700--Sobic007G096000 Sobic004G208900 Sobic004G208900 Sobic004G039700--Sobic004G208900 Sobic004G039700--Sobic003G280800 Sobic008G162900 Sobic008G162900 Sobic004G039700--Sobic008G162900 Sobic010G277500 Sobic010G277500 Sobic004G039700--Sobic010G277500 Sobic003G176500 Sobic003G176500 Sobic004G039700--Sobic003G176500 Sobic007G161300 Sobic007G161300 Sobic004G039700--Sobic007G161300 Sobic003G052200 Sobic003G052200 Sobic004G039700--Sobic003G052200 Sobic007G096600 Sobic007G096600 Sobic004G039700--Sobic007G096600 Sobic009G126400--Sobic003G052200 Sobic009G040600 Sobic009G040600 Sobic009G126400--Sobic009G040600 Sobic008G047800 Sobic008G047800 Sobic009G126400--Sobic008G047800 Sobic009G126400--Sobic003G280800 Sobic009G126400--Sobic001G222500 Sobic009G126400--Sobic008G162900 Sobic009G126400--Sobic007G096000 Sobic009G126400--Sobic004G208900 Sobic009G126400--Sobic002G309600 Sobic010G056000 Sobic010G056000 Sobic003G084900--Sobic010G056000 Sobic003G084900--Sobic007G096000 Sobic010G028800 Sobic010G028800 Sobic003G084900--Sobic010G028800 Sobic008G173900 Sobic008G173900 Sobic003G084900--Sobic008G173900 Sobic008G054500 Sobic008G054500 Sobic003G084900--Sobic008G054500 Sobic006G165000 Sobic006G165000 Sobic003G084900--Sobic006G165000 Sobic002G144933 Sobic002G144933 Sobic003G084900--Sobic002G144933 Sobic001G111900 Sobic001G111900 Sobic003G084900--Sobic001G111900 Sobic003G268300 Sobic003G268300 Sobic003G084900--Sobic003G268300 Sobic001G474600--Sobic003G280800 Sobic009G166300 Sobic009G166300 Sobic001G474600--Sobic009G166300 Sobic001G125200 Sobic001G125200 Sobic001G474600--Sobic001G125200 Sobic001G474600--Sobic003G372700 Sobic007G217000 Sobic007G217000 Sobic001G474600--Sobic007G217000 Sobic001G474600--Sobic007G096000 Sobic007G207000 Sobic007G207000 Sobic001G474600--Sobic007G207000 Sobic009G191000 Sobic009G191000 Sobic001G474600--Sobic009G191000 Sobic001G241200 Sobic001G241200 Sobic001G474600--Sobic001G241200 Sobic004G084300 Sobic004G084300 Sobic001G222500--Sobic004G084300 Sobic001G222500--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic001G222500--Sobic001G155000 Sobic001G222500--Sobic002G310200 Sobic001G222500--Sobic009G126400 Sobic001G222500--Sobic009G040600 Sobic002G006900 Sobic002G006900 Sobic001G222500--Sobic002G006900 Sobic001G222500--Sobic003G052200 Sobic001G222500--Sobic007G096000 Sobic002G310200--Sobic001G222500 Sobic002G310200--Sobic008G047800 Sobic002G310200--Sobic007G217000 Sobic002G310200--Sobic004G084300 Sobic002G310200--Sobic007G096000 Sobic010G101800 Sobic010G101800 Sobic002G310200--Sobic010G101800 Sobic003G443100 Sobic003G443100 Sobic002G310200--Sobic003G443100 Sobic002G310200--Sobic008G067600 Sobic004G067700 Sobic004G067700 Sobic002G310200--Sobic004G067700 Sobic009G000500--Sobic004G031700 Sobic009G000500--Sobic003G445400 Sobic002G320500 Sobic002G320500 Sobic009G000500--Sobic002G320500 Sobic009G000500--Sobic006G128900 Sobic006G133800 Sobic006G133800 Sobic009G000500--Sobic006G133800 Sobic001G090400 Sobic001G090400 Sobic009G000500--Sobic001G090400 Sobic009G000500--Sobic003G307000 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100
Octagon: transcription factors


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