Gene annotation
Transcriptome id Sobic.007G000100.1
Synonym HUA2, Sb07g000099
Functional annotation PWWP domain containing protein, expressed
UniProt C5YLB8
Pfam PF04818 PF00855
Panther DB PTHR12550 PTHR12550:SF49
NCBI CDD KOG1904; Transcription coactivator
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23150 : Tudor/PWWP/MBT domain-containing protein
RAP-DB (Rice) LOC_Os08g01054.1 : retrotransposon protein, putative, unclassified, expressed
MaizeGDB (Corn) Zm00025a040101 , Zm00025a033660
Brachypodium KQJ94740
Barley HORVU7Hr1G078800.8 , HORVU7Hr1G078800.9 , HORVU7Hr1G078800.6 , HORVU7Hr1G078800.7 , HORVU7Hr1G078800.4 , HORVU7Hr1G078800.5 , HORVU7Hr1G078800.2 , HORVU7Hr1G078800.3 , HORVU7Hr1G078800.1 , HORVU7Hr1G078800.14 , HORVU7Hr1G078800.15 , HORVU7Hr1G078800.16 , HORVU7Hr1G078800.17 , HORVU7Hr1G078800.10 , HORVU7Hr1G078800.11 , HORVU7Hr1G078800.12 , HORVU7Hr1G078800.13 , HORVU7Hr1G078800.18 , HORVU7Hr1G078800.19 , HORVU7Hr1G078800.21 , HORVU7Hr1G078800.20 , HORVU7Hr1G078800.23 , HORVU7Hr1G078800.25 , HORVU7Hr1G078800.24
Wheat TraesCS7B02G230200 , TraesCS7B02G230200 , TraesCS7B02G230200 , TraesCS7A02G329700 , TraesCS7A02G329700 , TraesCS7A02G329700 , TraesCS7D02G326400 , TraesCS7D02G326400 , TraesCS7D02G326400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G511500 RNA recognition motif containing protein, putative, expressed K12837: splicing factor U2AF 65 kDa subunit
2 Sobic.003G307000 RNA recognition motif containing protein, expressed K18667: activating signal cointegrator complex subunit 2
3 Sobic.008G173900 "OsPPKL3(Ortholog in rice:Zhan et al., 2012)"(PubMedID : 31659913)@serine/threonine-protein phosphatase BSL2, putative, expressed -
4 Sobic.003G445400 vacuolar fusion protein MON1 homolog A, putative, expressed -
5 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
6 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
7 Sobic.009G000500 pex14, putative, expressed K13343: peroxin-14
8 Sobic.003G241800 - -
9 Sobic.004G031700 expressed protein -
10 Sobic.004G271000 expressed protein -
11 Sobic.006G128900 cyclin-dependent kinase G-2, putative, expressed K08818: cell division cycle 2-like
12 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
13 Sobic.008G054500 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
15 Sobic.007G096000 expressed protein -
16 Sobic.006G032400 expressed protein -
17 Sobic.008G067600 protein kinase PKN/PRK1, effector, putative, expressed -
18 Sobic.001G306900 tetratricopeptide repeat domain containing protein, expressed K12600: SKI3, superkiller protein 3
19 Sobic.002G006900 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR


Gene co-expression network
sample Sobic007G000100 Sobic007G000100 Sobic001G511500 Sobic001G511500 Sobic007G000100--Sobic001G511500 Sobic003G307000 Sobic003G307000 Sobic007G000100--Sobic003G307000 Sobic008G173900 Sobic008G173900 Sobic007G000100--Sobic008G173900 Sobic003G445400 Sobic003G445400 Sobic007G000100--Sobic003G445400 Sobic003G119000 Sobic003G119000 Sobic007G000100--Sobic003G119000 Sobic002G153700 Sobic002G153700 Sobic007G000100--Sobic002G153700 Sobic009G000500 Sobic009G000500 Sobic007G000100--Sobic009G000500 Sobic003G241800 Sobic003G241800 Sobic007G000100--Sobic003G241800 Sobic004G031700 Sobic004G031700 Sobic007G000100--Sobic004G031700 Sobic001G511500--Sobic007G000100 Sobic006G209850 Sobic006G209850 Sobic001G511500--Sobic006G209850 Sobic006G128900 Sobic006G128900 Sobic001G511500--Sobic006G128900 Sobic001G511500--Sobic003G119000 Sobic001G511500--Sobic004G031700 Sobic001G306900 Sobic001G306900 Sobic001G511500--Sobic001G306900 Sobic001G511500--Sobic003G445400 Sobic001G511500--Sobic003G307000 Sobic006G032400 Sobic006G032400 Sobic001G511500--Sobic006G032400 Sobic003G307000--Sobic007G000100 Sobic003G307000--Sobic002G153700 Sobic003G307000--Sobic003G445400 Sobic003G307000--Sobic009G000500 Sobic003G307000--Sobic001G511500 Sobic003G307000--Sobic001G306900 Sobic003G307000--Sobic004G031700 Sobic003G394300 Sobic003G394300 Sobic003G307000--Sobic003G394300 Sobic010G065300 Sobic010G065300 Sobic003G307000--Sobic010G065300 Sobic002G157000 Sobic002G157000 Sobic008G173900--Sobic002G157000 Sobic002G144933 Sobic002G144933 Sobic008G173900--Sobic002G144933 Sobic001G420200 Sobic001G420200 Sobic008G173900--Sobic001G420200 Sobic003G268300 Sobic003G268300 Sobic008G173900--Sobic003G268300 Sobic008G054500 Sobic008G054500 Sobic008G173900--Sobic008G054500 Sobic003G200200 Sobic003G200200 Sobic008G173900--Sobic003G200200 Sobic001G274200 Sobic001G274200 Sobic008G173900--Sobic001G274200 Sobic001G413500 Sobic001G413500 Sobic008G173900--Sobic001G413500 Sobic007G096600 Sobic007G096600 Sobic008G173900--Sobic007G096600 Sobic003G445400--Sobic004G031700 Sobic003G445400--Sobic009G000500 Sobic008G067600 Sobic008G067600 Sobic003G445400--Sobic008G067600 Sobic003G445400--Sobic003G307000 Sobic002G158700 Sobic002G158700 Sobic003G445400--Sobic002G158700 Sobic003G445400--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic003G445400--Sobic007G096000 Sobic003G445400--Sobic001G511500 Sobic008G153000 Sobic008G153000 Sobic003G445400--Sobic008G153000 Sobic003G372700 Sobic003G372700 Sobic003G119000--Sobic003G372700 Sobic002G071500 Sobic002G071500 Sobic003G119000--Sobic002G071500 Sobic003G280800 Sobic003G280800 Sobic003G119000--Sobic003G280800 Sobic007G065400 Sobic007G065400 Sobic003G119000--Sobic007G065400 Sobic007G167500 Sobic007G167500 Sobic003G119000--Sobic007G167500 Sobic007G126600 Sobic007G126600 Sobic003G119000--Sobic007G126600 Sobic003G119000--Sobic001G511500 Sobic002G309600 Sobic002G309600 Sobic003G119000--Sobic002G309600 Sobic001G241200 Sobic001G241200 Sobic003G119000--Sobic001G241200 Sobic002G153700--Sobic002G071500 Sobic005G207500 Sobic005G207500 Sobic002G153700--Sobic005G207500 Sobic008G009700 Sobic008G009700 Sobic002G153700--Sobic008G009700 Sobic002G153700--Sobic010G065300 Sobic009G119000 Sobic009G119000 Sobic002G153700--Sobic009G119000 Sobic002G153700--Sobic003G307000 Sobic002G264200 Sobic002G264200 Sobic002G153700--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic002G153700--Sobic010G069100 Sobic002G153700--Sobic001G306900 Sobic009G000500--Sobic004G031700 Sobic009G000500--Sobic003G445400 Sobic002G320500 Sobic002G320500 Sobic009G000500--Sobic002G320500 Sobic009G000500--Sobic006G128900 Sobic006G133800 Sobic006G133800 Sobic009G000500--Sobic006G133800 Sobic001G090400 Sobic001G090400 Sobic009G000500--Sobic001G090400 Sobic009G000500--Sobic003G307000 Sobic009G000500--Sobic008G173900 Sobic001G206100 Sobic001G206100 Sobic009G000500--Sobic001G206100 Sobic003G241800--Sobic007G000100 Sobic003G241800--Sobic003G119000 Sobic007G117400 Sobic007G117400 Sobic003G241800--Sobic007G117400 Sobic003G241800--Sobic007G126600 Sobic004G065100 Sobic004G065100 Sobic003G241800--Sobic004G065100 Sobic007G161000 Sobic007G161000 Sobic003G241800--Sobic007G161000 Sobic004G039200 Sobic004G039200 Sobic003G241800--Sobic004G039200 Sobic003G241800--Sobic005G207500 Sobic003G241800--Sobic007G065400 Sobic004G031700--Sobic009G000500 Sobic004G031700--Sobic003G445400 Sobic001G544200 Sobic001G544200 Sobic004G031700--Sobic001G544200 Sobic001G477800 Sobic001G477800 Sobic004G031700--Sobic001G477800 Sobic006G080300 Sobic006G080300 Sobic004G031700--Sobic006G080300 Sobic004G031700--Sobic006G128900 Sobic001G094000 Sobic001G094000 Sobic004G031700--Sobic001G094000 Sobic004G031700--Sobic001G511500 Sobic004G031700--Sobic002G158700
Octagon: transcription factors


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