Gene annotation
Transcriptome id Sobic.003G059750.4,Sobic.003G059750.1,Sobic.003G059750.5,Sobic.003G059750.2,Sobic.003G059750.3
Synonym -
Functional annotation -
UniProt A0A1W0VVV9 , A0A1W0VVT9 , A0A1W0VVY3 , A0A1W0VVV1
Pfam PF00400 PF00439 PF00439 PF00400
Panther DB PTHR16266
NCBI CDD -
KEGG Orthology K11797; PHIP, PH-interacting protein
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G49430 : WD40/YVTN repeat-like-containing domain;Bromodomain
RAP-DB (Rice) LOC_Os03g19340.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a035669
Brachypodium KQJ84645
Barley HORVU4Hr1G054000.31 , HORVU4Hr1G054000.30 , HORVU4Hr1G054000.33 , HORVU4Hr1G054000.37 , HORVU4Hr1G054000.39 , HORVU4Hr1G054000.38 , HORVU4Hr1G054000.26 , HORVU4Hr1G054000.24 , HORVU4Hr1G054000.25 , HORVU4Hr1G054000.22 , HORVU4Hr1G054000.23 , HORVU4Hr1G054000.20 , HORVU4Hr1G054000.21 , HORVU4Hr1G054000.29 , HORVU4Hr1G054000.27 , HORVU4Hr1G054000.28 , HORVU5Hr1G002030.21 , HORVU5Hr1G002030.20 , HORVU5Hr1G002030.4 , HORVU5Hr1G002030.5 , HORVU5Hr1G002030.6 , HORVU5Hr1G002030.7 , HORVU5Hr1G002030.1 , HORVU5Hr1G002030.2 , HORVU5Hr1G002030.3 , HORVU5Hr1G002030.8 , HORVU5Hr1G002030.9 , HORVU5Hr1G002030.16 , HORVU5Hr1G002030.17 , HORVU5Hr1G002030.14 , HORVU5Hr1G002030.15 , HORVU5Hr1G002030.12 , HORVU5Hr1G002030.13 , HORVU5Hr1G002030.10 , HORVU5Hr1G002030.11 , HORVU5Hr1G002030.18 , HORVU5Hr1G002030.19 , HORVU4Hr1G054000.40 , HORVU4Hr1G054000.41 , HORVU4Hr1G054000.42 , HORVU4Hr1G054000.43 , HORVU4Hr1G054000.44 , HORVU4Hr1G054000.45 , HORVU4Hr1G054000.46 , HORVU4Hr1G054000.47 , HORVU4Hr1G054000.48 , HORVU4Hr1G054000.49 , HORVU4Hr1G054000.32 , HORVU4Hr1G054000.35 , HORVU4Hr1G054000.34 , HORVU4Hr1G054000.36 , HORVU4Hr1G054000.7 , HORVU4Hr1G054000.6 , HORVU4Hr1G054000.5 , HORVU4Hr1G054000.4 , HORVU4Hr1G054000.3 , HORVU4Hr1G054000.2 , HORVU4Hr1G054000.1 , HORVU4Hr1G054000.9 , HORVU4Hr1G054000.8 , HORVU4Hr1G054000.19 , HORVU4Hr1G054000.10 , HORVU4Hr1G054000.18 , HORVU4Hr1G054000.17 , HORVU4Hr1G054000.16 , HORVU4Hr1G054000.15 , HORVU4Hr1G054000.14 , HORVU4Hr1G054000.13 , HORVU4Hr1G054000.12 , HORVU4Hr1G054000.11
Wheat TraesCS5B02G012900 , TraesCS5A02G014600 , TraesCS4D02G185600 , TraesCS4D02G185600 , TraesCS4A02G120400 , TraesCS5D02G020400 , TraesCS5D02G020400 , TraesCS5D02G020400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G103600 protein of unknown function DUF1296 domain containing protein, expressed -
2 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
3 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
4 Sobic.010G279450 - K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
5 Sobic.002G404700 expressed protein K11367: chromodomain-helicase-DNA-binding protein 1
6 Sobic.003G444800 expressed protein -
7 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
8 Sobic.002G405800 PHD-finger family protein, expressed -
9 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
10 Sobic.009G119000 tetratricopeptide repeat containing protein, putative, expressed K09527: DnaJ homolog subfamily C member 7
11 Sobic.002G112700 glutamine-dependent NAD, putative, expressed K01950: E6.3.5.1, NADSYN1, QNS1, NAD+ synthase (glutamine-hydrolysing)
12 Sobic.001G363500 DIRP family protein, putative, expressed -
13 Sobic.008G028700 SET domain containing protein, expressed -
14 Sobic.008G153000 MATH domain containing protein, expressed -
15 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
16 Sobic.004G314000 expressed protein -
17 Sobic.005G118600 NB-ARC domain containing protein, expressed -
18 Sobic.003G119000 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
19 Sobic.001G154900 "GL3.1/qGL3(Ortholog in rice:Qi et al., 2012, Zhang et al., 2012)"(PubMedID : 31659834)@serine/threonine protein phosphatase, putative, expressed -
20 Sobic.006G032500 - -


Gene co-expression network
sample Sobic003G059750 Sobic003G059750 Sobic007G103600 Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic005G207500 Sobic005G207500 Sobic003G059750--Sobic005G207500 Sobic005G112300 Sobic005G112300 Sobic003G059750--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G444800 Sobic003G444800 Sobic003G059750--Sobic003G444800 Sobic001G311500 Sobic001G311500 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic002G071500 Sobic002G071500 Sobic003G059750--Sobic002G071500 Sobic007G103600--Sobic003G059750 Sobic007G103600--Sobic005G207500 Sobic005G118600 Sobic005G118600 Sobic007G103600--Sobic005G118600 Sobic007G103600--Sobic003G444800 Sobic007G103600--Sobic002G071500 Sobic008G153000 Sobic008G153000 Sobic007G103600--Sobic008G153000 Sobic003G119000 Sobic003G119000 Sobic007G103600--Sobic003G119000 Sobic002G264200 Sobic002G264200 Sobic007G103600--Sobic002G264200 Sobic006G032500 Sobic006G032500 Sobic007G103600--Sobic006G032500 Sobic005G207500--Sobic003G059750 Sobic002G153700 Sobic002G153700 Sobic005G207500--Sobic002G153700 Sobic005G207500--Sobic007G103600 Sobic005G207500--Sobic003G119000 Sobic008G009700 Sobic008G009700 Sobic005G207500--Sobic008G009700 Sobic002G353600 Sobic002G353600 Sobic005G207500--Sobic002G353600 Sobic010G069100 Sobic010G069100 Sobic005G207500--Sobic010G069100 Sobic005G207500--Sobic002G071500 Sobic001G026200 Sobic001G026200 Sobic005G207500--Sobic001G026200 Sobic001G363500 Sobic001G363500 Sobic005G112300--Sobic001G363500 Sobic007G062800 Sobic007G062800 Sobic005G112300--Sobic007G062800 Sobic010G112100 Sobic010G112100 Sobic005G112300--Sobic010G112100 Sobic010G139000 Sobic010G139000 Sobic005G112300--Sobic010G139000 Sobic007G105100 Sobic007G105100 Sobic005G112300--Sobic007G105100 Sobic001G540400 Sobic001G540400 Sobic005G112300--Sobic001G540400 Sobic010G010700 Sobic010G010700 Sobic005G112300--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic005G112300--Sobic005G008800 Sobic005G112300--Sobic002G071500 Sobic010G279450--Sobic005G112300 Sobic010G279450--Sobic010G139000 Sobic010G279450--Sobic002G405800 Sobic004G314000 Sobic004G314000 Sobic010G279450--Sobic004G314000 Sobic010G279450--Sobic003G059750 Sobic008G028700 Sobic008G028700 Sobic010G279450--Sobic008G028700 Sobic010G279450--Sobic001G363500 Sobic004G009600 Sobic004G009600 Sobic010G279450--Sobic004G009600 Sobic010G247800 Sobic010G247800 Sobic010G279450--Sobic010G247800 Sobic002G404700--Sobic002G405800 Sobic002G404700--Sobic003G059750 Sobic002G309600 Sobic002G309600 Sobic002G404700--Sobic002G309600 Sobic007G126600 Sobic007G126600 Sobic002G404700--Sobic007G126600 Sobic002G404700--Sobic004G314000 Sobic002G404700--Sobic005G112300 Sobic002G404700--Sobic010G279450 Sobic002G404700--Sobic003G119000 Sobic001G241200 Sobic001G241200 Sobic002G404700--Sobic001G241200 SobicK028600 SobicK028600 Sobic003G444800--SobicK028600 Sobic003G444800--Sobic003G059750 Sobic002G103600 Sobic002G103600 Sobic003G444800--Sobic002G103600 Sobic004G357100 Sobic004G357100 Sobic003G444800--Sobic004G357100 Sobic007G042400 Sobic007G042400 Sobic003G444800--Sobic007G042400 Sobic002G112700 Sobic002G112700 Sobic003G444800--Sobic002G112700 Sobic003G444800--Sobic010G279450 Sobic006G234700 Sobic006G234700 Sobic003G444800--Sobic006G234700 Sobic001G376200 Sobic001G376200 Sobic003G444800--Sobic001G376200 Sobic001G311500--Sobic010G139000 Sobic009G247400 Sobic009G247400 Sobic001G311500--Sobic009G247400 Sobic001G311500--Sobic005G112300 Sobic001G311500--Sobic003G059750 Sobic001G311500--Sobic008G009700 Sobic001G311500--Sobic004G314000 Sobic001G311500--Sobic010G279450 Sobic001G311500--Sobic008G028700 Sobic001G311500--Sobic001G363500 Sobic002G405800--Sobic007G062800 Sobic002G405800--Sobic005G112300 Sobic002G405800--Sobic002G404700 Sobic002G405800--Sobic010G010700 Sobic002G405800--Sobic010G279450 Sobic002G008900 Sobic002G008900 Sobic002G405800--Sobic002G008900 Sobic004G034900 Sobic004G034900 Sobic002G405800--Sobic004G034900 Sobic001G289600 Sobic001G289600 Sobic002G405800--Sobic001G289600 Sobic002G405800--Sobic010G247800 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic002G071500--Sobic001G026200 Sobic002G071500--Sobic002G153700 Sobic002G071500--Sobic010G069100 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500
Octagon: transcription factors


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