Gene annotation
Transcriptome id Sobic.009G119000.1
Synonym Sb09g018680
Functional annotation tetratricopeptide repeat containing protein, putative, expressed
UniProt A0A1B6P7Y0
Pfam PF00226 PF13414
Panther DB PTHR22904 PTHR22904:SF339
NCBI CDD KOG0550; Molecular chaperone (DnaJ superfamily)
KEGG Orthology K09527; DnaJ homolog subfamily C member 7
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G12430 : Heat shock protein DnaJ with tetratricopeptide repeat
RAP-DB (Rice) LOC_Os05g31062.1 : DNAJ heat shock N-terminal domain-containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043293 , Zm00025a036935 , Zm00025a036929
Brachypodium PNT71411 , PNT71410 , KQK06588 , KQK06587
Barley -
Wheat TraesCS1A02G234900 , TraesCS1A02G234900 , TraesCS1B02G248800 , TraesCS1B02G248800 , TraesCS1B02G248800 , TraesCS1D02G237300 , TraesCS1D02G237300 , TraesCS1B02G248800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G153700 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
2 Sobic.003G059750 - K11797: PHIP, PH-interacting protein
3 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
4 Sobic.010G065300 expressed protein K11643: CHD4, chromodomain-helicase-DNA-binding protein 4
5 Sobic.008G153000 MATH domain containing protein, expressed -
6 Sobic.010G275500 EF hand family protein, putative, expressed -
7 Sobic.003G416700 homeobox domain containing protein, expressed -
8 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
9 Sobic.001G311500 N-acetylglucosaminyl transferase component, putative, expressed K03860: PIGQ, phosphatidylinositol N-acetylglucosaminyltransferase subunit Q
10 Sobic.006G116100 RNA recognition motif containing protein, putative, expressed -
11 Sobic.010G116600 FHA domain containing protein, putative, expressed -
12 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
13 Sobic.001G219900 expressed protein -
14 Sobic.002G422100 EMB1011, putative, expressed K14317: NUP214, nuclear pore complex protein Nup214
15 Sobic.002G154000 EDM2, putative, expressed -
16 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
17 Sobic.010G001100 chromo domain containing protein, expressed -
18 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
19 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
20 Sobic.007G183900 ubiquitin family protein, putative, expressed -


Gene co-expression network
sample Sobic009G119000 Sobic009G119000 Sobic002G153700 Sobic002G153700 Sobic009G119000--Sobic002G153700 Sobic003G059750 Sobic003G059750 Sobic009G119000--Sobic003G059750 Sobic002G071500 Sobic002G071500 Sobic009G119000--Sobic002G071500 Sobic010G065300 Sobic010G065300 Sobic009G119000--Sobic010G065300 Sobic008G153000 Sobic008G153000 Sobic009G119000--Sobic008G153000 Sobic010G275500 Sobic010G275500 Sobic009G119000--Sobic010G275500 Sobic003G416700 Sobic003G416700 Sobic009G119000--Sobic003G416700 Sobic004G048800 Sobic004G048800 Sobic009G119000--Sobic004G048800 Sobic001G311500 Sobic001G311500 Sobic009G119000--Sobic001G311500 Sobic002G153700--Sobic002G071500 Sobic005G207500 Sobic005G207500 Sobic002G153700--Sobic005G207500 Sobic008G009700 Sobic008G009700 Sobic002G153700--Sobic008G009700 Sobic002G153700--Sobic010G065300 Sobic002G153700--Sobic009G119000 Sobic003G307000 Sobic003G307000 Sobic002G153700--Sobic003G307000 Sobic002G264200 Sobic002G264200 Sobic002G153700--Sobic002G264200 Sobic010G069100 Sobic010G069100 Sobic002G153700--Sobic010G069100 Sobic001G306900 Sobic001G306900 Sobic002G153700--Sobic001G306900 Sobic007G103600 Sobic007G103600 Sobic003G059750--Sobic007G103600 Sobic003G059750--Sobic005G207500 Sobic005G112300 Sobic005G112300 Sobic003G059750--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic003G059750--Sobic010G279450 Sobic002G404700 Sobic002G404700 Sobic003G059750--Sobic002G404700 Sobic003G444800 Sobic003G444800 Sobic003G059750--Sobic003G444800 Sobic003G059750--Sobic001G311500 Sobic002G405800 Sobic002G405800 Sobic003G059750--Sobic002G405800 Sobic003G059750--Sobic002G071500 Sobic002G071500--Sobic005G112300 Sobic003G408600 Sobic003G408600 Sobic002G071500--Sobic003G408600 Sobic002G071500--Sobic008G009700 Sobic010G116600 Sobic010G116600 Sobic002G071500--Sobic010G116600 Sobic001G026200 Sobic001G026200 Sobic002G071500--Sobic001G026200 Sobic002G071500--Sobic002G153700 Sobic002G071500--Sobic010G069100 Sobic003G119000 Sobic003G119000 Sobic002G071500--Sobic003G119000 Sobic010G201500 Sobic010G201500 Sobic002G071500--Sobic010G201500 Sobic010G001100 Sobic010G001100 Sobic010G065300--Sobic010G001100 Sobic010G065300--Sobic008G009700 Sobic010G065300--Sobic002G153700 Sobic010G065300--Sobic001G306900 Sobic001G134300 Sobic001G134300 Sobic010G065300--Sobic001G134300 Sobic003G293200 Sobic003G293200 Sobic010G065300--Sobic003G293200 Sobic010G065300--Sobic009G119000 Sobic004G156500 Sobic004G156500 Sobic010G065300--Sobic004G156500 Sobic010G065300--Sobic004G048800 Sobic006G116100 Sobic006G116100 Sobic008G153000--Sobic006G116100 Sobic006G046700 Sobic006G046700 Sobic008G153000--Sobic006G046700 Sobic008G149800 Sobic008G149800 Sobic008G153000--Sobic008G149800 Sobic008G153000--Sobic002G264200 Sobic001G155000 Sobic001G155000 Sobic008G153000--Sobic001G155000 Sobic003G445400 Sobic003G445400 Sobic008G153000--Sobic003G445400 Sobic008G153000--Sobic003G059750 Sobic007G026000 Sobic007G026000 Sobic008G153000--Sobic007G026000 Sobic008G153000--Sobic010G069100 Sobic010G053800 Sobic010G053800 Sobic010G275500--Sobic010G053800 Sobic004G072100 Sobic004G072100 Sobic010G275500--Sobic004G072100 Sobic006G012500 Sobic006G012500 Sobic010G275500--Sobic006G012500 Sobic010G275500--Sobic001G155000 Sobic010G275500--Sobic010G116600 Sobic010G275500--Sobic010G069100 Sobic010G275500--Sobic009G119000 Sobic007G183900 Sobic007G183900 Sobic010G275500--Sobic007G183900 Sobic002G397500 Sobic002G397500 Sobic010G275500--Sobic002G397500 Sobic002G154000 Sobic002G154000 Sobic003G416700--Sobic002G154000 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G360400 Sobic003G360400 Sobic003G416700--Sobic003G360400 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic003G416700--Sobic010G275500 Sobic008G098300 Sobic008G098300 Sobic004G048800--Sobic008G098300 Sobic001G398800 Sobic001G398800 Sobic004G048800--Sobic001G398800 Sobic004G242400 Sobic004G242400 Sobic004G048800--Sobic004G242400 Sobic004G048800--Sobic010G001100 Sobic004G048800--Sobic003G360400 Sobic001G363500 Sobic001G363500 Sobic004G048800--Sobic001G363500 Sobic002G317200 Sobic002G317200 Sobic004G048800--Sobic002G317200 Sobic001G433800 Sobic001G433800 Sobic004G048800--Sobic001G433800 Sobic004G048800--Sobic005G112300 Sobic010G139000 Sobic010G139000 Sobic001G311500--Sobic010G139000 Sobic009G247400 Sobic009G247400 Sobic001G311500--Sobic009G247400 Sobic001G311500--Sobic005G112300 Sobic001G311500--Sobic003G059750 Sobic001G311500--Sobic008G009700 Sobic004G314000 Sobic004G314000 Sobic001G311500--Sobic004G314000 Sobic001G311500--Sobic010G279450 Sobic008G028700 Sobic008G028700 Sobic001G311500--Sobic008G028700 Sobic001G311500--Sobic001G363500
Octagon: transcription factors


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