Gene annotation
Transcriptome id Sobic.002G154000.3,Sobic.002G154000.1,Sobic.002G154000.2
Synonym EDM2
Functional annotation EDM2, putative, expressed
UniProt A0A1B6QBL6 , A0A1W0W425 , A0A1W0W485
Pfam PF12047
Panther DB PTHR22884 PTHR22884:SF340
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55390 : ENHANCED DOWNY MILDEW 2
RAP-DB (Rice) LOC_Os08g24946.1,LOC_Os01g32720.1 : EDM2, putative, expressed,expressed protein
MaizeGDB (Corn) Zm00025a046256 , Zm00025a013274
Brachypodium KQJ89690 , KQJ89691 , KQJ89689 , KQJ89688 , KQJ89687 , KQJ89686
Barley HORVU5Hr1G053470.8 , HORVU5Hr1G053470.9 , HORVU5Hr1G053470.2 , HORVU5Hr1G053470.3 , HORVU5Hr1G053470.1 , HORVU5Hr1G053470.6 , HORVU5Hr1G053470.7 , HORVU5Hr1G053470.4 , HORVU5Hr1G053470.5 , HORVU5Hr1G053470.18 , HORVU5Hr1G053470.19 , HORVU5Hr1G053470.10 , HORVU5Hr1G053470.11 , HORVU5Hr1G053470.12 , HORVU5Hr1G053470.13 , HORVU5Hr1G053470.14 , HORVU5Hr1G053470.15 , HORVU5Hr1G053470.16 , HORVU5Hr1G053470.17 , HORVU5Hr1G053470.29 , HORVU5Hr1G053470.28 , HORVU5Hr1G053470.27 , HORVU5Hr1G053470.26 , HORVU5Hr1G053470.21 , HORVU5Hr1G053470.20 , HORVU5Hr1G053470.23 , HORVU5Hr1G053470.22 , HORVU5Hr1G105980.2 , HORVU5Hr1G105980.3 , HORVU5Hr1G105980.1 , HORVU5Hr1G105980.6 , HORVU5Hr1G105980.7 , HORVU5Hr1G105980.4 , HORVU5Hr1G105980.5 , HORVU5Hr1G105980.8 , HORVU5Hr1G105980.9 , HORVU5Hr1G053470.25 , HORVU5Hr1G105980.10 , HORVU5Hr1G105980.11 , HORVU5Hr1G105980.12 , HORVU5Hr1G105980.13 , HORVU5Hr1G105980.14 , HORVU5Hr1G105980.15 , HORVU5Hr1G105980.16 , HORVU5Hr1G105980.17 , HORVU5Hr1G105980.19
Wheat TraesCS5A02G439400 , TraesCS5A02G175300 , TraesCS5A02G175300 , TraesCS5B02G172800 , TraesCS5B02G172800 , TraesCS5A02G439400 , TraesCS5D02G446600 , TraesCS5D02G179800 , TraesCS5D02G179800 , TraesCS5A02G175300 , TraesCS5B02G442400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
2 Sobic.003G416700 homeobox domain containing protein, expressed -
3 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
4 Sobic.001G063700 expressed protein -
5 Sobic.010G001100 chromo domain containing protein, expressed -
6 Sobic.001G461400 pre-mRNA-processing factor 39, putative, expressed K13217: PRPF39, pre-mRNA-processing factor 39
7 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
8 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
9 Sobic.007G063000 expressed protein -
10 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
11 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
12 Sobic.009G256300 DNA binding protein, putative, expressed -
13 Sobic.006G240100 BRCA1-associated protein, putative, expressed K10632: BRCA1-associated protein
14 Sobic.005G200800 homeobox domain containing protein, expressed -
15 Sobic.002G264200 RNA recognition motif containing protein, expressed -
16 Sobic.010G069100 expressed protein -
17 Sobic.006G118700 MYB family transcription factor, putative, expressed -
18 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
19 Sobic.001G313700 expressed protein -
20 Sobic.005G064000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C


Gene co-expression network
sample Sobic002G154000 Sobic002G154000 Sobic003G360400 Sobic003G360400 Sobic002G154000--Sobic003G360400 Sobic003G416700 Sobic003G416700 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic001G063700 Sobic001G063700 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic001G461400 Sobic001G461400 Sobic002G154000--Sobic001G461400 Sobic001G433800 Sobic001G433800 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic003G360400--Sobic010G112100 Sobic003G360400--Sobic002G154000 Sobic001G354600 Sobic001G354600 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic003G416700--Sobic001G461400 Sobic007G183900 Sobic007G183900 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500 Sobic010G112100--Sobic003G360400 Sobic010G112100--Sobic005G112300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic010G112100--Sobic001G433800 Sobic001G540400 Sobic001G540400 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic010G112100--Sobic003G389200 Sobic001G063700--Sobic001G461400 Sobic001G063700--Sobic003G360400 Sobic001G063700--Sobic010G112100 Sobic001G063700--Sobic002G154000 Sobic003G188400 Sobic003G188400 Sobic001G063700--Sobic003G188400 Sobic001G063700--Sobic001G433800 Sobic001G063700--Sobic009G256300 Sobic008G002500 Sobic008G002500 Sobic001G063700--Sobic008G002500 Sobic001G063700--Sobic001G354600 Sobic010G065300 Sobic010G065300 Sobic010G001100--Sobic010G065300 Sobic010G001100--Sobic004G048800 Sobic002G396500 Sobic002G396500 Sobic010G001100--Sobic002G396500 Sobic003G293200 Sobic003G293200 Sobic010G001100--Sobic003G293200 Sobic010G001100--Sobic004G242400 Sobic009G109200 Sobic009G109200 Sobic010G001100--Sobic009G109200 Sobic010G001100--Sobic002G154000 Sobic001G352900 Sobic001G352900 Sobic010G001100--Sobic001G352900 Sobic010G001100--Sobic009G256300 Sobic001G461400--Sobic001G063700 Sobic001G461400--Sobic003G416700 Sobic001G461400--Sobic002G264200 Sobic001G461400--Sobic002G154000 Sobic001G087600 Sobic001G087600 Sobic001G461400--Sobic001G087600 Sobic005G200800 Sobic005G200800 Sobic001G461400--Sobic005G200800 Sobic001G461400--Sobic003G360400 Sobic002G071500 Sobic002G071500 Sobic001G461400--Sobic002G071500 Sobic001G461400--Sobic010G112100 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic001G433800--Sobic007G063000 Sobic001G433800--Sobic005G112300 Sobic001G433800--Sobic004G242400 Sobic002G133300 Sobic002G133300 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic008G098300 Sobic008G098300 Sobic004G048800--Sobic008G098300 Sobic001G398800 Sobic001G398800 Sobic004G048800--Sobic001G398800 Sobic004G048800--Sobic004G242400 Sobic004G048800--Sobic010G001100 Sobic004G048800--Sobic003G360400 Sobic004G048800--Sobic001G363500 Sobic002G317200 Sobic002G317200 Sobic004G048800--Sobic002G317200 Sobic004G048800--Sobic001G433800 Sobic004G048800--Sobic005G112300 Sobic007G063000--Sobic001G433800 Sobic003G196300 Sobic003G196300 Sobic007G063000--Sobic003G196300 Sobic007G063000--Sobic003G360400 Sobic007G063000--Sobic009G109200 Sobic009G165700 Sobic009G165700 Sobic007G063000--Sobic009G165700 Sobic007G063000--Sobic010G112100 Sobic003G166750 Sobic003G166750 Sobic007G063000--Sobic003G166750 Sobic007G063000--Sobic004G242400 Sobic007G063000--Sobic009G256300
Octagon: transcription factors


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