Gene annotation
Transcriptome id Sobic.006G240100.3,Sobic.006G240100.1,Sobic.006G240100.2
Synonym BRIZ1
Functional annotation BRCA1-associated protein, putative, expressed
UniProt C5Y919 , A0A1Z5RFB2 , A0A1Z5RFS4
Pfam PF02148 PF07576
Panther DB PTHR24007 PTHR24007:SF8
NCBI CDD KOG0804; Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein)
KEGG Orthology K10632; BRCA1-associated protein
Gene Ontology GO:0008270; zinc ion binding


Orthologs (automatic annotation)
TAIR AT2G42160 : zinc finger (ubiquitin-hydrolase) domain-containing protein
RAP-DB (Rice) LOC_Os04g55480.1,LOC_Os04g55480.2 : BRCA1-associated protein, putative, expressed
MaizeGDB (Corn) Zm00025a009554
Brachypodium KQJ84968
Barley HORVU2Hr1G114110.2 , HORVU2Hr1G114110.3 , HORVU2Hr1G114110.1
Wheat TraesCS2D02G516600 , TraesCS2A02G515000 , TraesCS2B02G543300 , TraesCS2D02G516500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
2 Sobic.003G416700 homeobox domain containing protein, expressed -
3 Sobic.002G154000 EDM2, putative, expressed -
4 Sobic.007G132100 myrosinase precursor, putative, expressed -
5 Sobic.007G218000 chloride transporter, chloride channel family, putative, expressed -
6 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
7 Sobic.010G204400 phox domain-containing protein, putative, expressed -
8 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
9 Sobic.004G072100 centromere/kinetochore protein zw10, putative, expressed K11578: ZW10, protein transport protein DSL1/ZW10
10 Sobic.004G096400 serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B, putative, expressed K04354: serine/threonine-protein phosphatase 2A regulatory subunit B
11 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -
12 Sobic.003G379200 wound-responsive family protein, putative, expressed -
13 Sobic.006G131000 expressed protein K11968: ariadne-1
14 Sobic.001G065100 cullin, putative, expressed K10609: cullin 4
15 Sobic.010G116600 FHA domain containing protein, putative, expressed -
16 Sobic.008G088300 OsFBDUF58 - F-box and DUF domain containing protein, expressed -
17 Sobic.010G236400 ubiquitin carboxyl-terminal hydrolase domain containing protein, expressed K12847: USP39, U4/U6.U5 tri-snRNP-associated protein 2
18 Sobic.006G174850 - K15193: SPTY2D1, protein SPT2
19 Sobic.002G366400 histone deacetylase, putative, expressed K11407: histone deacetylase 6
20 Sobic.001G313700 expressed protein -


Gene co-expression network
sample Sobic006G240100 Sobic006G240100 Sobic009G044800 Sobic009G044800 Sobic006G240100--Sobic009G044800 Sobic003G416700 Sobic003G416700 Sobic006G240100--Sobic003G416700 Sobic002G154000 Sobic002G154000 Sobic006G240100--Sobic002G154000 Sobic007G132100 Sobic007G132100 Sobic006G240100--Sobic007G132100 Sobic007G218000 Sobic007G218000 Sobic006G240100--Sobic007G218000 Sobic003G360400 Sobic003G360400 Sobic006G240100--Sobic003G360400 Sobic010G204400 Sobic010G204400 Sobic006G240100--Sobic010G204400 Sobic001G354600 Sobic001G354600 Sobic006G240100--Sobic001G354600 Sobic004G072100 Sobic004G072100 Sobic006G240100--Sobic004G072100 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic001G433800 Sobic001G433800 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic003G416700--Sobic002G154000 Sobic002G264200 Sobic002G264200 Sobic003G416700--Sobic002G264200 Sobic001G461400 Sobic001G461400 Sobic003G416700--Sobic001G461400 Sobic003G416700--Sobic007G183900 Sobic001G051700 Sobic001G051700 Sobic003G416700--Sobic001G051700 Sobic003G416700--Sobic003G360400 Sobic009G119000 Sobic009G119000 Sobic003G416700--Sobic009G119000 Sobic001G063700 Sobic001G063700 Sobic003G416700--Sobic001G063700 Sobic010G275500 Sobic010G275500 Sobic003G416700--Sobic010G275500 Sobic002G154000--Sobic003G360400 Sobic002G154000--Sobic003G416700 Sobic010G112100 Sobic010G112100 Sobic002G154000--Sobic010G112100 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic002G154000--Sobic001G461400 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic007G063000 Sobic007G063000 Sobic002G154000--Sobic007G063000 Sobic007G132100--Sobic007G218000 Sobic007G132100--Sobic004G072100 Sobic004G039600 Sobic004G039600 Sobic007G132100--Sobic004G039600 Sobic004G178200 Sobic004G178200 Sobic007G132100--Sobic004G178200 Sobic006G131000 Sobic006G131000 Sobic007G132100--Sobic006G131000 Sobic006G012500 Sobic006G012500 Sobic007G132100--Sobic006G012500 Sobic007G132100--Sobic009G044800 Sobic008G099800 Sobic008G099800 Sobic007G132100--Sobic008G099800 Sobic007G132100--Sobic010G204400 Sobic007G218000--Sobic007G132100 Sobic007G218000--Sobic004G072100 Sobic002G112700 Sobic002G112700 Sobic007G218000--Sobic002G112700 Sobic007G218000--Sobic006G131000 Sobic007G218000--Sobic009G044800 Sobic007G218000--Sobic010G204400 Sobic007G218000--Sobic006G012500 Sobic009G249700 Sobic009G249700 Sobic007G218000--Sobic009G249700 Sobic009G092400 Sobic009G092400 Sobic007G218000--Sobic009G092400 Sobic003G360400--Sobic010G112100 Sobic003G360400--Sobic002G154000 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic006G163800 Sobic006G163800 Sobic010G204400--Sobic006G163800 Sobic006G195700 Sobic006G195700 Sobic010G204400--Sobic006G195700 Sobic010G204400--Sobic007G218000 Sobic008G153000 Sobic008G153000 Sobic010G204400--Sobic008G153000 Sobic010G236400 Sobic010G236400 Sobic010G204400--Sobic010G236400 Sobic010G204400--Sobic007G132100 Sobic010G204400--Sobic003G416700 Sobic010G204400--Sobic006G131000 Sobic010G204400--Sobic010G116600 Sobic001G354600--Sobic003G360400 Sobic001G354600--Sobic010G112100 Sobic001G354600--Sobic001G433800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic002G133300 Sobic002G133300 Sobic001G354600--Sobic002G133300 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic001G354600--Sobic009G044800 Sobic004G072100--Sobic007G218000 Sobic010G053800 Sobic010G053800 Sobic004G072100--Sobic010G053800 Sobic004G072100--Sobic010G275500 Sobic004G072100--Sobic007G132100 Sobic004G072100--Sobic006G012500 Sobic010G069100 Sobic010G069100 Sobic004G072100--Sobic010G069100 Sobic004G072100--Sobic010G116600 Sobic008G047800 Sobic008G047800 Sobic004G072100--Sobic008G047800 Sobic001G155000 Sobic001G155000 Sobic004G072100--Sobic001G155000
Octagon: transcription factors


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