Gene annotation
Transcriptome id Sobic.001G354600.2,Sobic.001G354600.1
Synonym Sb01g033900
Functional annotation SAP domain containing protein, expressed
UniProt A0A1B6QMW1
Pfam PF02037 PF16294
Panther DB -
NCBI CDD -
KEGG Orthology K12875; ACIN1, apoptotic chromatin condensation inducer in the nucleus
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G39680 : SAP domain-containing protein
RAP-DB (Rice) LOC_Os03g26630.2,LOC_Os03g26630.1 : SAP domain containing protein, expressed
MaizeGDB (Corn) Zm00025a002683 , Zm00025a052079
Brachypodium KQK21479
Barley HORVU4Hr1G037030.8 , HORVU4Hr1G037030.3 , HORVU4Hr1G037030.2 , HORVU4Hr1G037030.5 , HORVU4Hr1G037030.4 , HORVU4Hr1G037030.7 , HORVU4Hr1G037030.6 , HORVU4Hr1G037030.1
Wheat TraesCS4D02G165300 , TraesCS4A02G146400 , TraesCS4A02G146400
Populus -


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cDNA sequences
Sobic.001G354600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
2 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
3 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
4 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
5 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
6 Sobic.002G133300 ZOS9-20 - C2H2 zinc finger protein, expressed K14400: pre-mRNA cleavage complex 2 protein Pcf11
7 Sobic.001G063700 expressed protein -
8 Sobic.002G068100 aminoacyl-tRNA synthetase, putative, expressed -
9 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
10 Sobic.008G002500 RCD1, putative, expressed -
11 Sobic.007G183900 ubiquitin family protein, putative, expressed -
12 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
13 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -
14 Sobic.001G025000 FACT complex subunit SPT16, putative, expressed -
15 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
16 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
17 Sobic.002G154000 EDM2, putative, expressed -
18 Sobic.001G020000 metallo-beta-lactamase, putative, expressed K14402: CPSF2, cleavage and polyadenylation specificity factor subunit 2
19 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
20 Sobic.007G063000 expressed protein -


Gene co-expression network
sample Sobic001G354600 Sobic001G354600 Sobic003G360400 Sobic003G360400 Sobic001G354600--Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic001G354600--Sobic010G112100 Sobic001G433800 Sobic001G433800 Sobic001G354600--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic002G133300 Sobic002G133300 Sobic001G354600--Sobic002G133300 Sobic001G063700 Sobic001G063700 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic009G044800 Sobic009G044800 Sobic001G354600--Sobic009G044800 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic003G360400--Sobic001G354600 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic010G112100--Sobic003G360400 Sobic010G112100--Sobic005G112300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic010G112100--Sobic001G433800 Sobic001G540400 Sobic001G540400 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic010G112100--Sobic003G389200 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic001G433800--Sobic007G063000 Sobic001G433800--Sobic005G112300 Sobic001G433800--Sobic004G242400 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic008G098300 Sobic008G098300 Sobic004G048800--Sobic008G098300 Sobic001G398800 Sobic001G398800 Sobic004G048800--Sobic001G398800 Sobic004G048800--Sobic004G242400 Sobic010G001100 Sobic010G001100 Sobic004G048800--Sobic010G001100 Sobic004G048800--Sobic003G360400 Sobic004G048800--Sobic001G363500 Sobic002G317200 Sobic002G317200 Sobic004G048800--Sobic002G317200 Sobic004G048800--Sobic001G433800 Sobic004G048800--Sobic005G112300 Sobic007G105100--Sobic005G112300 Sobic001G289600 Sobic001G289600 Sobic007G105100--Sobic001G289600 Sobic007G105100--Sobic003G408600 Sobic010G010700 Sobic010G010700 Sobic007G105100--Sobic010G010700 Sobic007G105100--Sobic007G062800 Sobic005G008800 Sobic005G008800 Sobic007G105100--Sobic005G008800 Sobic007G105100--Sobic001G540400 Sobic007G105100--Sobic003G360400 Sobic007G105100--Sobic010G112100 Sobic004G276400 Sobic004G276400 Sobic002G133300--Sobic004G276400 Sobic002G133300--Sobic001G433800 Sobic001G004400 Sobic001G004400 Sobic002G133300--Sobic001G004400 Sobic001G289800 Sobic001G289800 Sobic002G133300--Sobic001G289800 Sobic003G072200 Sobic003G072200 Sobic002G133300--Sobic003G072200 Sobic002G397500 Sobic002G397500 Sobic002G133300--Sobic002G397500 Sobic004G131300 Sobic004G131300 Sobic002G133300--Sobic004G131300 Sobic001G194200 Sobic001G194200 Sobic002G133300--Sobic001G194200 Sobic001G493700 Sobic001G493700 Sobic002G133300--Sobic001G493700 Sobic001G461400 Sobic001G461400 Sobic001G063700--Sobic001G461400 Sobic001G063700--Sobic003G360400 Sobic001G063700--Sobic010G112100 Sobic001G063700--Sobic002G154000 Sobic003G188400 Sobic003G188400 Sobic001G063700--Sobic003G188400 Sobic001G063700--Sobic001G433800 Sobic001G063700--Sobic009G256300 Sobic008G002500 Sobic008G002500 Sobic001G063700--Sobic008G002500 Sobic001G063700--Sobic001G354600 Sobic001G111600 Sobic001G111600 Sobic002G068100--Sobic001G111600 Sobic002G068100--Sobic001G354600 Sobic002G068100--Sobic003G360400 Sobic004G096400 Sobic004G096400 Sobic002G068100--Sobic004G096400 Sobic004G158400 Sobic004G158400 Sobic002G068100--Sobic004G158400 Sobic006G240100 Sobic006G240100 Sobic002G068100--Sobic006G240100 Sobic002G068100--Sobic002G154000 Sobic002G137200 Sobic002G137200 Sobic002G068100--Sobic002G137200 Sobic002G299700 Sobic002G299700 Sobic002G068100--Sobic002G299700 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900
Octagon: transcription factors


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