Gene annotation
Transcriptome id Sobic.002G299700.1
Synonym GRIP, ATGRIP
Functional annotation ATGRIP/GRIP, putative, expressed
UniProt A0A1B6QE55
Pfam PF01465
Panther DB PTHR23160 PTHR23160:SF10
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G66030 : Golgi-localized GRIP domain-containing protein
RAP-DB (Rice) LOC_Os07g28940.1 : ATGRIP/GRIP, putative, expressed
MaizeGDB (Corn) Zm00025a014607
Brachypodium PNT75145 , KQK16314 , KQK16312 , KQK16313 , KQK16311
Barley HORVU2Hr1G059170.3 , HORVU2Hr1G059170.1 , HORVU2Hr1G059170.6 , HORVU2Hr1G059170.10 , HORVU2Hr1G059170.11 , HORVU2Hr1G059170.14 , HORVU2Hr1G059170.16 , HORVU2Hr1G059170.17 , HORVU2Hr1G059110.2 , HORVU2Hr1G059170.7 , HORVU2Hr1G059170.5 , HORVU2Hr1G059170.8 , HORVU2Hr1G059170.2 , HORVU2Hr1G059170.4 , HORVU2Hr1G059110.1 , HORVU2Hr1G059170.9
Wheat TraesCS2B02G259500 , TraesCS2A02G234700 , TraesCS2A02G234700 , TraesCS2D02G238300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G116600 FHA domain containing protein, putative, expressed -
2 Sobic.001G363500 DIRP family protein, putative, expressed -
3 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
4 Sobic.002G397500 SAC3/GANP family protein, expressed -
5 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
6 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
7 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
8 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
9 Sobic.007G062800 SET domain containing protein, expressed -
10 Sobic.003G225700 - -
11 Sobic.001G241200 protein kinase domain containing protein, expressed -
12 Sobic.002G071500 cleavage and polyadenylation specificity factor, putative, expressed K12830: SF3B3, SAP130, splicing factor 3B subunit 3
13 Sobic.001G196500 plus-3 domain containing protein, putative, expressed -
14 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
15 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
16 Sobic.004G314000 expressed protein -
17 Sobic.002G309600 DNA-binding protein, putative, expressed K14326: UPF1, regulator of nonsense transcripts 1
18 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
19 Sobic.003G093800 - K03254: translation initiation factor 3 subunit A
20 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -


Gene co-expression network
sample Sobic002G299700 Sobic002G299700 Sobic010G116600 Sobic010G116600 Sobic002G299700--Sobic010G116600 Sobic001G363500 Sobic001G363500 Sobic002G299700--Sobic001G363500 Sobic005G112300 Sobic005G112300 Sobic002G299700--Sobic005G112300 Sobic002G397500 Sobic002G397500 Sobic002G299700--Sobic002G397500 Sobic004G048800 Sobic004G048800 Sobic002G299700--Sobic004G048800 Sobic004G242400 Sobic004G242400 Sobic002G299700--Sobic004G242400 Sobic007G105100 Sobic007G105100 Sobic002G299700--Sobic007G105100 Sobic003G408600 Sobic003G408600 Sobic002G299700--Sobic003G408600 Sobic007G062800 Sobic007G062800 Sobic002G299700--Sobic007G062800 Sobic002G071500 Sobic002G071500 Sobic010G116600--Sobic002G071500 Sobic010G116600--Sobic002G299700 Sobic003G093800 Sobic003G093800 Sobic010G116600--Sobic003G093800 Sobic009G044800 Sobic009G044800 Sobic010G116600--Sobic009G044800 Sobic004G072100 Sobic004G072100 Sobic010G116600--Sobic004G072100 Sobic010G236400 Sobic010G236400 Sobic010G116600--Sobic010G236400 Sobic010G275500 Sobic010G275500 Sobic010G116600--Sobic010G275500 Sobic010G116600--Sobic003G408600 Sobic010G053800 Sobic010G053800 Sobic010G116600--Sobic010G053800 Sobic001G363500--Sobic005G112300 Sobic001G363500--Sobic007G062800 Sobic010G247800 Sobic010G247800 Sobic001G363500--Sobic010G247800 Sobic001G363500--Sobic002G299700 Sobic010G112100 Sobic010G112100 Sobic001G363500--Sobic010G112100 Sobic001G363500--Sobic004G242400 Sobic001G433800 Sobic001G433800 Sobic001G363500--Sobic001G433800 Sobic010G279450 Sobic010G279450 Sobic001G363500--Sobic010G279450 Sobic010G139000 Sobic010G139000 Sobic001G363500--Sobic010G139000 Sobic005G112300--Sobic001G363500 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic005G112300--Sobic010G139000 Sobic005G112300--Sobic007G105100 Sobic001G540400 Sobic001G540400 Sobic005G112300--Sobic001G540400 Sobic010G010700 Sobic010G010700 Sobic005G112300--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic005G112300--Sobic005G008800 Sobic005G112300--Sobic002G071500 Sobic002G397500--Sobic003G408600 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic002G397500--Sobic001G540400 Sobic009G109200 Sobic009G109200 Sobic002G397500--Sobic009G109200 Sobic003G072200 Sobic003G072200 Sobic002G397500--Sobic003G072200 Sobic002G397500--Sobic004G242400 Sobic004G276400 Sobic004G276400 Sobic002G397500--Sobic004G276400 Sobic002G397500--Sobic010G112100 Sobic008G098300 Sobic008G098300 Sobic004G048800--Sobic008G098300 Sobic001G398800 Sobic001G398800 Sobic004G048800--Sobic001G398800 Sobic004G048800--Sobic004G242400 Sobic010G001100 Sobic010G001100 Sobic004G048800--Sobic010G001100 Sobic003G360400 Sobic003G360400 Sobic004G048800--Sobic003G360400 Sobic004G048800--Sobic001G363500 Sobic002G317200 Sobic002G317200 Sobic004G048800--Sobic002G317200 Sobic004G048800--Sobic001G433800 Sobic004G048800--Sobic005G112300 Sobic004G242400--Sobic007G062800 Sobic004G242400--Sobic009G109200 Sobic010G105200 Sobic010G105200 Sobic004G242400--Sobic010G105200 Sobic004G242400--Sobic004G276400 Sobic004G242400--Sobic010G010700 Sobic004G242400--Sobic010G112100 Sobic004G314000 Sobic004G314000 Sobic004G242400--Sobic004G314000 Sobic009G256300 Sobic009G256300 Sobic004G242400--Sobic009G256300 Sobic004G242400--Sobic001G433800 Sobic007G105100--Sobic005G112300 Sobic001G289600 Sobic001G289600 Sobic007G105100--Sobic001G289600 Sobic007G105100--Sobic003G408600 Sobic007G105100--Sobic010G010700 Sobic007G105100--Sobic007G062800 Sobic007G105100--Sobic005G008800 Sobic007G105100--Sobic001G540400 Sobic007G105100--Sobic003G360400 Sobic007G105100--Sobic010G112100 Sobic003G408600--Sobic001G540400 Sobic003G408600--Sobic005G008800 Sobic003G408600--Sobic002G397500 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic003G408600--Sobic010G112100 Sobic001G058700 Sobic001G058700 Sobic003G408600--Sobic001G058700 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600 Sobic007G062800--Sobic001G540400 Sobic007G062800--Sobic005G112300 Sobic002G405800 Sobic002G405800 Sobic007G062800--Sobic002G405800 Sobic002G008900 Sobic002G008900 Sobic007G062800--Sobic002G008900 Sobic007G062800--Sobic010G010700 Sobic007G062800--Sobic004G242400 Sobic004G034900 Sobic004G034900 Sobic007G062800--Sobic004G034900 Sobic007G062800--Sobic004G276400 Sobic007G062800--Sobic002G397500
Octagon: transcription factors


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