Gene annotation
Transcriptome id Sobic.003G360400.2,Sobic.003G360400.1,Sobic.003G360400.3,Sobic.003G360400.4
Synonym
Functional annotation ulp1 protease family protein, putative, expressed
UniProt A0A1W0W0J0 , A0A1W0W0J1 , A0A1W0W0G8 , C5XQE9
Pfam PF02902
Panther DB PTHR24365
NCBI CDD KOG3246; Sentrin-specific cysteine protease (Ulp1 family)
KEGG Orthology K08596; sentrin-specific protease 7
Gene Ontology GO:0008234; cysteine-type peptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT1G09730 : Cysteine proteinases superfamily protein
RAP-DB (Rice) LOC_Os05g11770.1 : ulp1 protease family protein, putative, expressed
MaizeGDB (Corn) Zm00025a039611
Brachypodium KQK02134
Barley HORVU5Hr1G117720.10 , HORVU5Hr1G117720.20 , HORVU5Hr1G117720.21 , HORVU5Hr1G117720.22 , HORVU5Hr1G117720.19 , HORVU5Hr1G117720.18 , HORVU5Hr1G117720.15 , HORVU5Hr1G117720.14 , HORVU5Hr1G117720.17 , HORVU5Hr1G117720.16 , HORVU5Hr1G117720.11 , HORVU5Hr1G117720.13 , HORVU5Hr1G117720.12 , HORVU5Hr1G117720.9 , HORVU5Hr1G117720.1 , HORVU5Hr1G117720.3 , HORVU5Hr1G117720.2 , HORVU5Hr1G117720.4 , HORVU5Hr1G117720.7 , HORVU5Hr1G117720.6 , HORVU5Hr1G117720.5
Wheat TraesCS5D02G514800 , TraesCS5D02G514800 , TraesCS5B02G514400 , TraesCS4A02G358100 , TraesCS4A02G358100 , TraesCS4A02G358100
Populus PNT48994 , PNT48995 , PNT48990 , PNT48991 , PNT48992 , PNT48993 , PNT36894 , PNT36895 , PNT36896 , PNT36892 , PNT36893 , PNT48987 , PNT48989 , PNT48988


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
2 Sobic.002G154000 EDM2, putative, expressed -
3 Sobic.001G354600 SAP domain containing protein, expressed K12875: ACIN1, apoptotic chromatin condensation inducer in the nucleus
4 Sobic.001G433800 lissencephaly type-1-like homology motif, putative, expressed -
5 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
6 Sobic.009G044800 cullin, putative, expressed K03347: CUL1, cullin 1
7 Sobic.005G112300 ubiquitin carboxyl-terminal hydrolase 5, putative, expressed K11835: USP4_11, ubiquitin carboxyl-terminal hydrolase 4/11
8 Sobic.007G063000 expressed protein -
9 Sobic.009G256300 DNA binding protein, putative, expressed -
10 Sobic.004G048800 - K12599: SKI2, antiviral helicase SKI2
11 Sobic.007G105100 STE_MEK_ste7_MAP2K.8 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
12 Sobic.001G063700 expressed protein -
13 Sobic.001G363500 DIRP family protein, putative, expressed -
14 Sobic.004G242400 nuclear-pore anchor, putative, expressed K09291: TPR, MLP1, nucleoprotein TPR
15 Sobic.001G025000 FACT complex subunit SPT16, putative, expressed -
16 Sobic.001G313700 expressed protein -
17 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
18 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
19 Sobic.007G159900 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
20 Sobic.007G062800 SET domain containing protein, expressed -


Gene co-expression network
sample Sobic003G360400 Sobic003G360400 Sobic010G112100 Sobic010G112100 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic001G354600 Sobic001G354600 Sobic003G360400--Sobic001G354600 Sobic001G433800 Sobic001G433800 Sobic003G360400--Sobic001G433800 Sobic003G389200 Sobic003G389200 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic010G112100--Sobic003G360400 Sobic010G112100--Sobic005G112300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic010G112100--Sobic001G433800 Sobic001G540400 Sobic001G540400 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic010G112100--Sobic003G389200 Sobic002G154000--Sobic003G360400 Sobic003G416700 Sobic003G416700 Sobic002G154000--Sobic003G416700 Sobic002G154000--Sobic010G112100 Sobic001G063700 Sobic001G063700 Sobic002G154000--Sobic001G063700 Sobic010G001100 Sobic010G001100 Sobic002G154000--Sobic010G001100 Sobic001G461400 Sobic001G461400 Sobic002G154000--Sobic001G461400 Sobic002G154000--Sobic001G433800 Sobic004G048800 Sobic004G048800 Sobic002G154000--Sobic004G048800 Sobic002G154000--Sobic007G063000 Sobic001G354600--Sobic003G360400 Sobic001G354600--Sobic010G112100 Sobic001G354600--Sobic001G433800 Sobic001G354600--Sobic004G048800 Sobic007G105100 Sobic007G105100 Sobic001G354600--Sobic007G105100 Sobic002G133300 Sobic002G133300 Sobic001G354600--Sobic002G133300 Sobic001G354600--Sobic001G063700 Sobic002G068100 Sobic002G068100 Sobic001G354600--Sobic002G068100 Sobic001G354600--Sobic009G044800 Sobic001G433800--Sobic010G112100 Sobic001G433800--Sobic003G360400 Sobic001G433800--Sobic007G063000 Sobic001G433800--Sobic005G112300 Sobic001G433800--Sobic004G242400 Sobic001G433800--Sobic002G133300 Sobic001G363500 Sobic001G363500 Sobic001G433800--Sobic001G363500 Sobic006G252900 Sobic006G252900 Sobic001G433800--Sobic006G252900 Sobic006G041600 Sobic006G041600 Sobic001G433800--Sobic006G041600 Sobic003G389200--Sobic009G256300 Sobic010G206900 Sobic010G206900 Sobic003G389200--Sobic010G206900 Sobic003G389200--Sobic003G360400 Sobic003G389200--Sobic010G112100 Sobic010G010700 Sobic010G010700 Sobic003G389200--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic003G389200--Sobic001G365900 Sobic003G389200--Sobic001G540400 Sobic003G389200--Sobic007G105100 Sobic001G230000 Sobic001G230000 Sobic003G389200--Sobic001G230000 Sobic009G044800--Sobic003G360400 Sobic003G352200 Sobic003G352200 Sobic009G044800--Sobic003G352200 Sobic001G227400 Sobic001G227400 Sobic009G044800--Sobic001G227400 Sobic002G045600 Sobic002G045600 Sobic009G044800--Sobic002G045600 Sobic010G116600 Sobic010G116600 Sobic009G044800--Sobic010G116600 Sobic007G218000 Sobic007G218000 Sobic009G044800--Sobic007G218000 Sobic001G025000 Sobic001G025000 Sobic009G044800--Sobic001G025000 Sobic009G044800--Sobic001G433800 Sobic007G183900 Sobic007G183900 Sobic009G044800--Sobic007G183900 Sobic005G112300--Sobic001G363500 Sobic005G112300--Sobic007G062800 Sobic005G112300--Sobic010G112100 Sobic010G139000 Sobic010G139000 Sobic005G112300--Sobic010G139000 Sobic005G112300--Sobic007G105100 Sobic005G112300--Sobic001G540400 Sobic005G112300--Sobic010G010700 Sobic005G008800 Sobic005G008800 Sobic005G112300--Sobic005G008800 Sobic002G071500 Sobic002G071500 Sobic005G112300--Sobic002G071500 Sobic007G063000--Sobic001G433800 Sobic003G196300 Sobic003G196300 Sobic007G063000--Sobic003G196300 Sobic007G063000--Sobic003G360400 Sobic009G109200 Sobic009G109200 Sobic007G063000--Sobic009G109200 Sobic009G165700 Sobic009G165700 Sobic007G063000--Sobic009G165700 Sobic007G063000--Sobic010G112100 Sobic003G166750 Sobic003G166750 Sobic007G063000--Sobic003G166750 Sobic007G063000--Sobic004G242400 Sobic007G063000--Sobic009G256300 Sobic009G256300--Sobic010G112100 Sobic009G256300--Sobic003G389200 Sobic009G256300--Sobic004G242400 Sobic009G256300--Sobic010G010700 Sobic010G123600 Sobic010G123600 Sobic009G256300--Sobic010G123600 Sobic009G256300--Sobic003G360400 Sobic009G256300--Sobic009G109200 Sobic004G276400 Sobic004G276400 Sobic009G256300--Sobic004G276400 Sobic001G542400 Sobic001G542400 Sobic009G256300--Sobic001G542400
Octagon: transcription factors


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