Gene annotation
Transcriptome id Sobic.005G100700.1,Sobic.005G100700.2
Synonym Sb05g008670
Functional annotation mRNA-capping enzyme, putative, expressed
UniProt A0A1Z5RIB3 , C5Y1R0
Pfam PF00782 PF03919 PF01331
Panther DB PTHR10367 PTHR10367:SF11
NCBI CDD KOG2386; mRNA capping enzyme, guanylyltransferase (alpha) subunit
KEGG Orthology -
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation GO:0004484mRNA guanylyltransferase activity GO:0006397mRNA processing GO:00063707-methylguanosine mRNA capping


Orthologs (automatic annotation)
TAIR AT3G09100 : mRNA capping enzyme family protein
RAP-DB (Rice) LOC_Os11g11070.1 : mRNA-capping enzyme, putative, expressed
MaizeGDB (Corn) Zm00025a029670 , Zm00025a012677
Brachypodium KQJ88930 , KQJ88929
Barley HORVU4Hr1G016400.9 , HORVU4Hr1G016400.8 , HORVU4Hr1G016400.5 , HORVU4Hr1G016400.4 , HORVU4Hr1G016400.7 , HORVU4Hr1G016400.6 , HORVU4Hr1G016400.1 , HORVU4Hr1G016400.3 , HORVU4Hr1G016400.2 , HORVU4Hr1G016400.20 , HORVU4Hr1G016400.19 , HORVU4Hr1G016400.18 , HORVU4Hr1G016400.11 , HORVU4Hr1G016400.10 , HORVU4Hr1G016400.13 , HORVU4Hr1G016400.12 , HORVU4Hr1G016400.15 , HORVU4Hr1G016400.14 , HORVU4Hr1G016400.17 , HORVU4Hr1G016400.16 , HORVU2Hr1G010980.1 , HORVU2Hr1G010980.2 , HORVU2Hr1G010980.3
Wheat TraesCS4D02G105000 , TraesCS4D02G105000 , TraesCS4D02G105000 , TraesCS4D02G105000 , TraesCS2D02G063200 , TraesCS2B02G077300 , TraesCS4B02G107900 , TraesCS4B02G107900 , TraesCS4B02G107900 , TraesCS4A02G204100 , TraesCS4A02G204100 , TraesCS4A02G204100 , TraesCS4A02G204100 , TraesCS4A02G204100 , TraesCS2A02G065100 , TraesCS2A02G065100 , TraesCS2A02G065100 , TraesCS2A02G065100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G360400 ulp1 protease family protein, putative, expressed K08596: sentrin-specific protease 7
2 Sobic.002G344000 expressed protein -
3 Sobic.007G159900 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
4 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
5 Sobic.008G113100 protein binding protein, putative, expressed -
6 Sobic.007G146100 formin, putative, expressed -
7 Sobic.006G096900 expressed protein -
8 Sobic.001G456300 digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
9 Sobic.010G112100 transcription factor jumonji, putative, expressed K11446: KDM5, [histone H3]-trimethyl-L-lysine4 demethylase
10 Sobic.003G316500 expressed protein -
11 Sobic.003G012100 smr domain containing protein, expressed -
12 Sobic.001G456900 expressed protein -
13 Sobic.010G021500 WD domain, G-beta repeat domain containing protein, expressed -
14 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
15 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
16 Sobic.009G238000 suppressor of phythchrome A, putative, expressed K16240: protein suppressor of PHYA-105 1
17 Sobic.002G154000 EDM2, putative, expressed -
18 Sobic.008G001200 RNA recognition motif containing protein, putative, expressed -
19 Sobic.001G026200 heat shock protein DnaJ, putative, expressed K09534: DnaJ homolog subfamily C member 14
20 Sobic.003G388100 expressed protein -


Gene co-expression network
sample Sobic005G100700 Sobic005G100700 Sobic003G360400 Sobic003G360400 Sobic005G100700--Sobic003G360400 Sobic002G344000 Sobic002G344000 Sobic005G100700--Sobic002G344000 Sobic007G159900 Sobic007G159900 Sobic005G100700--Sobic007G159900 Sobic003G389200 Sobic003G389200 Sobic005G100700--Sobic003G389200 Sobic008G113100 Sobic008G113100 Sobic005G100700--Sobic008G113100 Sobic007G146100 Sobic007G146100 Sobic005G100700--Sobic007G146100 Sobic006G096900 Sobic006G096900 Sobic005G100700--Sobic006G096900 Sobic001G456300 Sobic001G456300 Sobic005G100700--Sobic001G456300 Sobic010G112100 Sobic010G112100 Sobic005G100700--Sobic010G112100 Sobic003G360400--Sobic010G112100 Sobic002G154000 Sobic002G154000 Sobic003G360400--Sobic002G154000 Sobic001G354600 Sobic001G354600 Sobic003G360400--Sobic001G354600 Sobic001G433800 Sobic001G433800 Sobic003G360400--Sobic001G433800 Sobic003G360400--Sobic003G389200 Sobic009G044800 Sobic009G044800 Sobic003G360400--Sobic009G044800 Sobic005G112300 Sobic005G112300 Sobic003G360400--Sobic005G112300 Sobic007G063000 Sobic007G063000 Sobic003G360400--Sobic007G063000 Sobic009G256300 Sobic009G256300 Sobic003G360400--Sobic009G256300 Sobic002G344000--Sobic005G100700 Sobic008G044100 Sobic008G044100 Sobic002G344000--Sobic008G044100 Sobic002G344000--Sobic003G360400 Sobic002G211800 Sobic002G211800 Sobic002G344000--Sobic002G211800 Sobic001G230000 Sobic001G230000 Sobic002G344000--Sobic001G230000 Sobic002G344000--Sobic008G113100 Sobic003G398700 Sobic003G398700 Sobic002G344000--Sobic003G398700 Sobic002G344000--Sobic001G354600 Sobic010G206900 Sobic010G206900 Sobic002G344000--Sobic010G206900 Sobic007G159900--Sobic003G360400 Sobic004G158400 Sobic004G158400 Sobic007G159900--Sobic004G158400 Sobic002G366400 Sobic002G366400 Sobic007G159900--Sobic002G366400 Sobic007G159900--Sobic010G112100 Sobic007G183900 Sobic007G183900 Sobic007G159900--Sobic007G183900 Sobic005G064000 Sobic005G064000 Sobic007G159900--Sobic005G064000 Sobic007G159900--Sobic005G100700 Sobic003G188400 Sobic003G188400 Sobic007G159900--Sobic003G188400 Sobic007G159900--Sobic008G113100 Sobic003G389200--Sobic009G256300 Sobic003G389200--Sobic010G206900 Sobic003G389200--Sobic003G360400 Sobic003G389200--Sobic010G112100 Sobic010G010700 Sobic010G010700 Sobic003G389200--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic003G389200--Sobic001G365900 Sobic001G540400 Sobic001G540400 Sobic003G389200--Sobic001G540400 Sobic007G105100 Sobic007G105100 Sobic003G389200--Sobic007G105100 Sobic003G389200--Sobic001G230000 Sobic004G258700 Sobic004G258700 Sobic008G113100--Sobic004G258700 Sobic008G028700 Sobic008G028700 Sobic008G113100--Sobic008G028700 Sobic008G113100--Sobic005G064000 Sobic007G065400 Sobic007G065400 Sobic008G113100--Sobic007G065400 Sobic001G456900 Sobic001G456900 Sobic008G113100--Sobic001G456900 Sobic009G024000 Sobic009G024000 Sobic008G113100--Sobic009G024000 Sobic009G040600 Sobic009G040600 Sobic008G113100--Sobic009G040600 Sobic004G208900 Sobic004G208900 Sobic008G113100--Sobic004G208900 Sobic004G039200 Sobic004G039200 Sobic008G113100--Sobic004G039200 Sobic007G146100--Sobic005G100700 Sobic004G040350 Sobic004G040350 Sobic007G146100--Sobic004G040350 Sobic008G002500 Sobic008G002500 Sobic007G146100--Sobic008G002500 Sobic007G146100--Sobic002G344000 Sobic008G001200 Sobic008G001200 Sobic007G146100--Sobic008G001200 Sobic007G146100--Sobic001G354600 Sobic007G146100--Sobic003G360400 Sobic001G063700 Sobic001G063700 Sobic007G146100--Sobic001G063700 Sobic007G146100--Sobic007G063000 Sobic008G063300 Sobic008G063300 Sobic006G096900--Sobic008G063300 Sobic009G177500 Sobic009G177500 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic006G096900--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic006G096900--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic006G096900--Sobic006G056700 Sobic006G096900--Sobic001G433800 Sobic001G384300 Sobic001G384300 Sobic006G096900--Sobic001G384300 Sobic006G096900--Sobic009G044800 Sobic001G456300--Sobic005G100700 Sobic001G456300--Sobic003G360400 Sobic001G456300--Sobic006G056700 Sobic001G456300--Sobic007G183900 Sobic006G118700 Sobic006G118700 Sobic001G456300--Sobic006G118700 Sobic001G456300--Sobic010G112100 Sobic001G456300--Sobic001G063700 Sobic001G461400 Sobic001G461400 Sobic001G456300--Sobic001G461400 Sobic001G025000 Sobic001G025000 Sobic001G456300--Sobic001G025000 Sobic010G112100--Sobic003G360400 Sobic010G112100--Sobic005G112300 Sobic010G112100--Sobic009G256300 Sobic003G408600 Sobic003G408600 Sobic010G112100--Sobic003G408600 Sobic010G112100--Sobic001G433800 Sobic010G112100--Sobic001G540400 Sobic007G062800 Sobic007G062800 Sobic010G112100--Sobic007G062800 Sobic004G242400 Sobic004G242400 Sobic010G112100--Sobic004G242400 Sobic010G112100--Sobic003G389200
Octagon: transcription factors


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