Gene annotation
Transcriptome id Sobic.010G021500.1
Synonym EMB2757, Sb10g002050, TAN
Functional annotation WD domain, G-beta repeat domain containing protein, expressed
UniProt C5Z3B1
Pfam PF00400
Panther DB PTHR19854 PTHR19854:SF1
NCBI CDD KOG0322; G-protein beta subunit-like protein GNB1L, contains WD repeats
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT4G29860 : Transducin/WD40 repeat-like superfamily protein
RAP-DB (Rice) LOC_Os06g04040.1 : WD domain, G-beta repeat domain containing protein, expressed
MaizeGDB (Corn) Zm00025a050168
Brachypodium KQK19722
Barley HORVU3Hr1G081110.23 , HORVU3Hr1G081110.22 , HORVU3Hr1G081110.21 , HORVU3Hr1G081110.20 , HORVU3Hr1G081110.27 , HORVU3Hr1G081110.26 , HORVU3Hr1G081110.25 , HORVU3Hr1G081110.24 , HORVU3Hr1G081110.29 , HORVU3Hr1G081110.28 , HORVU3Hr1G081110.18 , HORVU3Hr1G081110.19 , HORVU3Hr1G081110.13 , HORVU3Hr1G081110.10 , HORVU3Hr1G081110.6 , HORVU3Hr1G081110.7 , HORVU3Hr1G081110.15 , HORVU3Hr1G081110.69 , HORVU3Hr1G081110.68 , HORVU3Hr1G081110.67 , HORVU3Hr1G081110.66 , HORVU3Hr1G081110.65 , HORVU3Hr1G081110.64 , HORVU3Hr1G081110.63 , HORVU3Hr1G081110.62 , HORVU3Hr1G081110.61 , HORVU3Hr1G081110.60 , HORVU7Hr1G012810.37 , HORVU7Hr1G012810.36 , HORVU7Hr1G012810.35 , HORVU7Hr1G012810.34 , HORVU7Hr1G012810.33 , HORVU7Hr1G012810.32 , HORVU7Hr1G012810.31 , HORVU7Hr1G012810.30 , HORVU7Hr1G012810.39 , HORVU7Hr1G012810.38 , HORVU3Hr1G081110.30 , HORVU3Hr1G081110.31 , HORVU3Hr1G081110.32 , HORVU3Hr1G081110.33 , HORVU3Hr1G081110.34 , HORVU3Hr1G081110.35 , HORVU3Hr1G081110.36 , HORVU3Hr1G081110.37 , HORVU3Hr1G081110.38 , HORVU3Hr1G081110.39 , HORVU3Hr1G081110.70 , HORVU7Hr1G012810.24 , HORVU7Hr1G012810.25 , HORVU7Hr1G012810.26 , HORVU7Hr1G012810.27 , HORVU7Hr1G012810.20 , HORVU7Hr1G012810.21 , HORVU7Hr1G012810.22 , HORVU7Hr1G012810.23 , HORVU7Hr1G012810.28 , HORVU7Hr1G012810.29 , HORVU3Hr1G081110.1 , HORVU3Hr1G081110.2 , HORVU3Hr1G081110.3 , HORVU3Hr1G081110.4 , HORVU3Hr1G081110.5 , HORVU3Hr1G081110.8 , HORVU3Hr1G081110.9 , HORVU3Hr1G081110.41 , HORVU3Hr1G081110.40 , HORVU3Hr1G081110.43 , HORVU3Hr1G081110.42 , HORVU3Hr1G081110.45 , HORVU3Hr1G081110.44 , HORVU3Hr1G081110.47 , HORVU3Hr1G081110.46 , HORVU3Hr1G081110.49 , HORVU3Hr1G081110.48 , HORVU7Hr1G012810.19 , HORVU7Hr1G012810.18 , HORVU7Hr1G012810.11 , HORVU7Hr1G012810.10 , HORVU7Hr1G012810.13 , HORVU7Hr1G012810.12 , HORVU7Hr1G012810.15 , HORVU7Hr1G012810.14 , HORVU7Hr1G012810.17 , HORVU7Hr1G012810.16 , HORVU3Hr1G081110.12 , HORVU3Hr1G081110.11 , HORVU3Hr1G081110.16 , HORVU3Hr1G081110.17 , HORVU3Hr1G081110.14 , HORVU3Hr1G081110.54 , HORVU7Hr1G012810.9 , HORVU7Hr1G012810.8 , HORVU7Hr1G012810.5 , HORVU7Hr1G012810.4 , HORVU7Hr1G012810.7 , HORVU7Hr1G012810.6 , HORVU7Hr1G012810.1 , HORVU7Hr1G012810.3 , HORVU7Hr1G012810.2 , HORVU3Hr1G081110.56 , HORVU3Hr1G081110.57 , HORVU3Hr1G081110.55 , HORVU3Hr1G081110.52 , HORVU3Hr1G081110.53 , HORVU3Hr1G081110.50 , HORVU3Hr1G081110.51 , HORVU3Hr1G081110.58 , HORVU3Hr1G081110.59
Wheat TraesCS3B02G376400 , TraesCS7A02G067900 , TraesCS7A02G067900 , TraesCS7D02G062000 , TraesCS3A02G344500 , TraesCS3A02G344500 , TraesCS4A02G421400 , TraesCS4A02G421400 , TraesCS3D02G338000 , TraesCS3A02G344500 , TraesCS3B02G376400 , TraesCS3B02G376400
Populus -


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cDNA sequences
Sobic.010G021500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G398700 expressed protein K15210: snRNA-activating protein complex subunit 3
2 Sobic.010G167900 expressed protein K14376: poly(A) polymerase
3 Sobic.008G113100 protein binding protein, putative, expressed -
4 Sobic.006G096900 expressed protein -
5 Sobic.001G456900 expressed protein -
6 Sobic.010G149200 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
7 Sobic.005G027400 RNA recognition motif containing protein, expressed K13161: heterogeneous nuclear ribonucleoprotein R
8 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
9 Sobic.003G221900 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.007G159900 ubiquitin carboxyl-terminal hydrolase family protein, expressed K11855: ubiquitin carboxyl-terminal hydrolase 36/42
11 Sobic.005G064000 SWIRM domain containing protein, expressed K11649: SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C
12 Sobic.010G243900 OsFBO9 - F-box and other domain containing protein, expressed K12115: clock-associated PAS protein ZTL
13 Sobic.010G143800 expressed protein -
14 Sobic.002G211800 AT-rich interaction region, putative, expressed -
15 Sobic.001G451400 HEAT repeat family protein, putative, expressed K15305: VAC14, vacuole morphology and inheritance protein 14
16 Sobic.005G207500 AAA-type ATPase family protein, putative, expressed -
17 Sobic.001G036050 - -
18 Sobic.003G316500 expressed protein -
19 Sobic.001G365900 PWWP domain containing protein, expressed -
20 Sobic.007G212300 RNA recognition motif containing protein, putative, expressed -


Gene co-expression network
sample Sobic010G021500 Sobic010G021500 Sobic003G398700 Sobic003G398700 Sobic010G021500--Sobic003G398700 Sobic010G167900 Sobic010G167900 Sobic010G021500--Sobic010G167900 Sobic008G113100 Sobic008G113100 Sobic010G021500--Sobic008G113100 Sobic006G096900 Sobic006G096900 Sobic010G021500--Sobic006G096900 Sobic001G456900 Sobic001G456900 Sobic010G021500--Sobic001G456900 Sobic010G149200 Sobic010G149200 Sobic010G021500--Sobic010G149200 Sobic005G027400 Sobic005G027400 Sobic010G021500--Sobic005G027400 Sobic005G100700 Sobic005G100700 Sobic010G021500--Sobic005G100700 Sobic003G221900 Sobic003G221900 Sobic010G021500--Sobic003G221900 Sobic002G257750 Sobic002G257750 Sobic003G398700--Sobic002G257750 Sobic003G398700--Sobic001G456900 Sobic008G044100 Sobic008G044100 Sobic003G398700--Sobic008G044100 Sobic003G398700--Sobic010G021500 Sobic007G136800 Sobic007G136800 Sobic003G398700--Sobic007G136800 Sobic004G185800 Sobic004G185800 Sobic003G398700--Sobic004G185800 Sobic003G168100 Sobic003G168100 Sobic003G398700--Sobic003G168100 Sobic003G398700--Sobic008G113100 Sobic010G126000 Sobic010G126000 Sobic003G398700--Sobic010G126000 Sobic010G167900--Sobic010G021500 Sobic004G088200 Sobic004G088200 Sobic010G167900--Sobic004G088200 Sobic003G394300 Sobic003G394300 Sobic010G167900--Sobic003G394300 Sobic002G297200 Sobic002G297200 Sobic010G167900--Sobic002G297200 Sobic009G026500 Sobic009G026500 Sobic010G167900--Sobic009G026500 Sobic002G034600 Sobic002G034600 Sobic010G167900--Sobic002G034600 Sobic002G353600 Sobic002G353600 Sobic010G167900--Sobic002G353600 Sobic002G382600 Sobic002G382600 Sobic010G167900--Sobic002G382600 Sobic005G207500 Sobic005G207500 Sobic010G167900--Sobic005G207500 Sobic004G258700 Sobic004G258700 Sobic008G113100--Sobic004G258700 Sobic008G028700 Sobic008G028700 Sobic008G113100--Sobic008G028700 Sobic005G064000 Sobic005G064000 Sobic008G113100--Sobic005G064000 Sobic007G065400 Sobic007G065400 Sobic008G113100--Sobic007G065400 Sobic008G113100--Sobic001G456900 Sobic009G024000 Sobic009G024000 Sobic008G113100--Sobic009G024000 Sobic009G040600 Sobic009G040600 Sobic008G113100--Sobic009G040600 Sobic004G208900 Sobic004G208900 Sobic008G113100--Sobic004G208900 Sobic004G039200 Sobic004G039200 Sobic008G113100--Sobic004G039200 Sobic008G063300 Sobic008G063300 Sobic006G096900--Sobic008G063300 Sobic009G177500 Sobic009G177500 Sobic006G096900--Sobic009G177500 Sobic006G252900 Sobic006G252900 Sobic006G096900--Sobic006G252900 Sobic003G360400 Sobic003G360400 Sobic006G096900--Sobic003G360400 Sobic003G095900 Sobic003G095900 Sobic006G096900--Sobic003G095900 Sobic006G056700 Sobic006G056700 Sobic006G096900--Sobic006G056700 Sobic001G433800 Sobic001G433800 Sobic006G096900--Sobic001G433800 Sobic001G384300 Sobic001G384300 Sobic006G096900--Sobic001G384300 Sobic009G044800 Sobic009G044800 Sobic006G096900--Sobic009G044800 Sobic001G036050 Sobic001G036050 Sobic001G456900--Sobic001G036050 Sobic010G139000 Sobic010G139000 Sobic001G456900--Sobic010G139000 Sobic001G456900--Sobic004G258700 Sobic001G456900--Sobic008G113100 Sobic001G456900--Sobic008G028700 Sobic002G180666 Sobic002G180666 Sobic001G456900--Sobic002G180666 Sobic001G311500 Sobic001G311500 Sobic001G456900--Sobic001G311500 Sobic001G456900--Sobic003G398700 Sobic003G101500 Sobic003G101500 Sobic001G456900--Sobic003G101500 Sobic006G145200 Sobic006G145200 Sobic010G149200--Sobic006G145200 Sobic010G243900 Sobic010G243900 Sobic010G149200--Sobic010G243900 Sobic010G149200--Sobic010G021500 Sobic001G126100 Sobic001G126100 Sobic010G149200--Sobic001G126100 Sobic004G164400 Sobic004G164400 Sobic010G149200--Sobic004G164400 Sobic003G340600 Sobic003G340600 Sobic010G149200--Sobic003G340600 Sobic004G042200 Sobic004G042200 Sobic010G149200--Sobic004G042200 Sobic010G143800 Sobic010G143800 Sobic010G149200--Sobic010G143800 Sobic010G149200--Sobic003G221900 Sobic002G309600 Sobic002G309600 Sobic005G027400--Sobic002G309600 Sobic004G065100 Sobic004G065100 Sobic005G027400--Sobic004G065100 Sobic001G451400 Sobic001G451400 Sobic005G027400--Sobic001G451400 Sobic009G132700 Sobic009G132700 Sobic005G027400--Sobic009G132700 Sobic007G117400 Sobic007G117400 Sobic005G027400--Sobic007G117400 Sobic001G219600 Sobic001G219600 Sobic005G027400--Sobic001G219600 Sobic001G289800 Sobic001G289800 Sobic005G027400--Sobic001G289800 Sobic008G047800 Sobic008G047800 Sobic005G027400--Sobic008G047800 Sobic004G006900 Sobic004G006900 Sobic005G027400--Sobic004G006900 Sobic005G100700--Sobic003G360400 Sobic002G344000 Sobic002G344000 Sobic005G100700--Sobic002G344000 Sobic007G159900 Sobic007G159900 Sobic005G100700--Sobic007G159900 Sobic003G389200 Sobic003G389200 Sobic005G100700--Sobic003G389200 Sobic005G100700--Sobic008G113100 Sobic007G146100 Sobic007G146100 Sobic005G100700--Sobic007G146100 Sobic005G100700--Sobic006G096900 Sobic001G456300 Sobic001G456300 Sobic005G100700--Sobic001G456300 Sobic010G112100 Sobic010G112100 Sobic005G100700--Sobic010G112100 Sobic001G122832 Sobic001G122832 Sobic003G221900--Sobic001G122832 Sobic003G316500 Sobic003G316500 Sobic003G221900--Sobic003G316500 Sobic003G221900--Sobic003G340600 Sobic001G389100 Sobic001G389100 Sobic003G221900--Sobic001G389100 Sobic003G221900--Sobic010G021500 Sobic006G133900 Sobic006G133900 Sobic003G221900--Sobic006G133900 Sobic010G147100 Sobic010G147100 Sobic003G221900--Sobic010G147100 Sobic001G332500 Sobic001G332500 Sobic003G221900--Sobic001G332500 Sobic003G029700 Sobic003G029700 Sobic003G221900--Sobic003G029700
Octagon: transcription factors


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